Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:17:51 (3074449): wrapper (7.7.26015): starting
17:17:51 (3074449): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 17:17:51] Arguments: --nthreads 3
[2025-10-12 17:17:51] Threads: 3
[2025-10-12 17:17:51] Checking for CVMFS
[2025-10-12 17:17:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:17:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:17:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:17:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:17:51] 2.9.2.0 1694695 4518 83096 151625 0 56 29952306 36864001 0 130560 0 3615924 99.991 157471 1020 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 17:17:51] CVMFS is ok
[2025-10-12 17:17:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:17:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:17:51] Further information can be found at the LHC@home message board.
[2025-10-12 17:17:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:17:51] Checking for apptainer binary...
[2025-10-12 17:17:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:17:51] Running /usr/bin/apptainer --version
[2025-10-12 17:17:51] apptainer version 1.4.1-1.1
[2025-10-12 17:17:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:17:51] thA312a
[2025-10-12 17:17:51] apptainer works
[2025-10-12 17:17:51] Set ATHENA_PROC_NUMBER=3
[2025-10-12 17:17:51] Set ATHENA_CORE_NUMBER=3
[2025-10-12 17:17:51] Starting ATLAS job with PandaID=6839164741
[2025-10-12 17:17:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:40:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:40:32] 2025-10-12 16:40:01,916 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:40:32] 2025-10-12 16:40:01,916 | INFO     | update_server=False
[2025-10-12 18:40:32] 2025-10-12 16:40:01,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:40:32] 2025-10-12 16:40:01,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:40:32] 2025-10-12 16:40:01,942 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:40:32] 2025-10-12 16:40:02,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:40:32] 2025-10-12 16:40:02,331 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:40:32] 2025-10-12 16:40:02,331 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:40:32] 2025-10-12 16:40:02,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:40:32] 2025-10-12 16:40:02,332 | INFO     | will abort loop
[2025-10-12 18:40:32] 2025-10-12 16:40:02,669 | INFO     | all payload control threads have been joined
[2025-10-12 18:40:32] 2025-10-12 16:40:02,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:40:32] 2025-10-12 16:40:02,922 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:02,922 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:02,945 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:02,984 | INFO     | all data control threads have been joined
[2025-10-12 18:40:32] 2025-10-12 16:40:03,289 | INFO     | all job control threads have been joined
[2025-10-12 18:40:32] 2025-10-12 16:40:03,337 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:03,474 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:03,674 | INFO     | [payload] control thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:03,990 | INFO     | [data] control thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,043 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,295 | INFO     | [job] control thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,295 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,343 | INFO     | [job] validate thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,360 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,407 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:04,417 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:06,900 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:12,918 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:40:32] 2025-10-12 16:40:13,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:40:32] 2025-10-12 16:40:14,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431246755648)>', '<ExcThread(monitor, started 140430389798656)>']
[2025-10-12 18:40:32] 2025-10-12 16:40:19,527 | INFO     | all workflow threads have been joined
[2025-10-12 18:40:32] 2025-10-12 16:40:19,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:40:32] 2025-10-12 16:40:19,527 | INFO     | traces error code: 0
[2025-10-12 18:40:32] 2025-10-12 16:40:19,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:40:32] 2025-10-12 16:40:32,050 | INFO     | PID=3078167 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:40:32] 2025-10-12 16:40:32,050 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:40:32] 2025-10-12 16:40:32,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:40:32] 2025-10-12 16:40:32,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:40:32] 2025-10-12 16:40:32,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:40:32] 2025-10-12 16:40:32,051 | INFO     | [monitor] control thread has ended
[2025-10-12 18:40:32] 2025-10-12 16:40:32,098 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:40:32] 2025-10-12 16:40:32,101 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:40:32] 2025-10-12 16:40:32,103 [wrapper] pilotpid: 3078167
[2025-10-12 18:40:32] 2025-10-12 16:40:32,105 [wrapper] Pilot exit status: 0
[2025-10-12 18:40:32] 2025-10-12 16:40:32,113 [wrapper] pandaids: 6839164741
[2025-10-12 18:40:32] 2025-10-12 16:40:32,130 [wrapper] cleanup supervisor_pilot 3096788 3078168
[2025-10-12 18:40:32] 2025-10-12 16:40:32,133 [wrapper] Test setup, not cleaning
[2025-10-12 18:40:32] 2025-10-12 16:40:32,135 [wrapper] apfmon messages muted
[2025-10-12 18:40:32] 2025-10-12 16:40:32,138 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:40:32] 2025-10-12 16:40:32,140 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:40:32]  *** Error codes and diagnostics ***
[2025-10-12 18:40:32]     "exeErrorCode": 0,
[2025-10-12 18:40:32]     "exeErrorDiag": "",
[2025-10-12 18:40:32]     "pilotErrorCode": 0,
[2025-10-12 18:40:32]     "pilotErrorDiag": "",
[2025-10-12 18:40:32]  *** Listing of results directory ***
[2025-10-12 18:40:32] total 413312
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:02 pilot3.tar.gz
[2025-10-12 18:40:32] -rwx------ 1 boinc boinc     36292 Oct 12 03:20 runpilot2-wrapper.sh
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:20 queuedata.json
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc       100 Oct 12 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:40:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 17:17 run_atlas
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc       105 Oct 12 17:17 job.xml
[2025-10-12 18:40:32] -rw-r--r-- 2 boinc boinc 220406904 Oct 12 17:17 EVNT.46676267._003126.pool.root.1
[2025-10-12 18:40:32] -rw-r--r-- 2 boinc boinc    569670 Oct 12 17:17 input.tar.gz
[2025-10-12 18:40:32] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:17 start_atlas.sh
[2025-10-12 18:40:32] drwxrwx--x 2 boinc boinc      4096 Oct 12 17:17 shared
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:17 boinc_setup_complete
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc      6447 Oct 12 17:17 init_data.xml
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:17 boinc_lockfile
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc      2550 Oct 12 17:17 pandaJob.out
[2025-10-12 18:40:32] -rw------- 1 boinc boinc    975528 Oct 12 17:17 agis_schedconf.cvmfs.json
[2025-10-12 18:40:32] -rw------- 1 boinc boinc   1560580 Oct 12 17:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:40:32] drwx------ 5 boinc boinc      4096 Oct 12 17:17 pilot3
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc       530 Oct 12 18:39 boinc_task_state.xml
[2025-10-12 18:40:32] -rw------- 1 boinc boinc 196991025 Oct 12 18:39 HITS.46676269._068232.pool.root.1
[2025-10-12 18:40:32] -rw------- 1 boinc boinc      1017 Oct 12 18:39 memory_monitor_summary.json
[2025-10-12 18:40:32] -rw------- 1 boinc boinc    248187 Oct 12 18:39 log.46676269._068232.job.log.tgz.1
[2025-10-12 18:40:32] -rw------- 1 boinc boinc      7748 Oct 12 18:40 heartbeat.json
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc        27 Oct 12 18:40 wrapper_checkpoint.txt
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc      8192 Oct 12 18:40 boinc_mmap_file
[2025-10-12 18:40:32] -rw------- 1 boinc boinc       747 Oct 12 18:40 pilotlog.txt
[2025-10-12 18:40:32] -rw------- 1 boinc boinc        95 Oct 12 18:40 pilot_heartbeat.json
[2025-10-12 18:40:32] -rw------- 1 boinc boinc    723971 Oct 12 18:40 log.46676269._068232.job.log.1
[2025-10-12 18:40:32] -rw------- 1 boinc boinc       357 Oct 12 18:40 output.list
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc       620 Oct 12 18:40 runtime_log
[2025-10-12 18:40:32] -rw------- 1 boinc boinc    993280 Oct 12 18:40 result.tar.gz
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc      8782 Oct 12 18:40 runtime_log.err
[2025-10-12 18:40:32] -rw------- 1 boinc boinc       659 Oct 12 18:40 f2kLDmAwzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUAiNDme1YSSm.diag
[2025-10-12 18:40:32] -rw-r--r-- 1 boinc boinc      7843 Oct 12 18:40 stderr.txt
[2025-10-12 18:40:32] HITS file was successfully produced:
[2025-10-12 18:40:32] -rw------- 1 boinc boinc 196991025 Oct 12 18:39 shared/HITS.pool.root.1
[2025-10-12 18:40:32]  *** Contents of shared directory: ***
[2025-10-12 18:40:32] total 409176
[2025-10-12 18:40:32] -rw-r--r-- 2 boinc boinc 220406904 Oct 12 17:17 ATLAS.root_0
[2025-10-12 18:40:32] -rw-r--r-- 2 boinc boinc    569670 Oct 12 17:17 input.tar.gz
[2025-10-12 18:40:32] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:17 start_atlas.sh
[2025-10-12 18:40:32] -rw------- 1 boinc boinc 196991025 Oct 12 18:39 HITS.pool.root.1
[2025-10-12 18:40:32] -rw------- 1 boinc boinc    993280 Oct 12 18:40 result.tar.gz
18:40:53 (3074449): run_atlas exited; CPU time 14125.407791
18:40:53 (3074449): called boinc_finish(0)

</stderr_txt>
]]>

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