Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:17:01 (1783620): wrapper (7.7.26015): starting
23:17:01 (1783620): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 23:17:01] Arguments: --nthreads 6
[2025-10-12 23:17:01] Threads: 6
[2025-10-12 23:17:01] Checking for CVMFS
[2025-10-12 23:17:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:17:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:17:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:17:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:17:02] 2.11.5.0 3102357 3931 87816 151623 3 57 42749611 52428801 929 130560 0 8986961 99.997 137939 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 23:17:02] CVMFS is ok
[2025-10-12 23:17:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:17:02] Checking for apptainer binary...
[2025-10-12 23:17:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:17:02] Running /usr/bin/apptainer --version
[2025-10-12 23:17:02] apptainer version 1.3.6-1.el9
[2025-10-12 23:17:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:17:02] testio002
[2025-10-12 23:17:02] apptainer works
[2025-10-12 23:17:02] Set ATHENA_PROC_NUMBER=6
[2025-10-12 23:17:02] Set ATHENA_CORE_NUMBER=6
[2025-10-12 23:17:02] Starting ATLAS job with PandaID=6838989051
[2025-10-12 23:17:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:30:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:30:22]  protocol_id=None
[2025-10-13 00:30:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 00:30:22]  replicas=None
[2025-10-13 00:30:22]  scope=mc23_13p6TeV
[2025-10-13 00:30:22]  status=None
[2025-10-13 00:30:22]  status_code=0
[2025-10-13 00:30:22]  storage_token=
[2025-10-13 00:30:22]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6838989051/log.46676269._065366.job.log.tgz.1
[2025-10-13 00:30:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/1d/log.46676269._065366.job.log.tgz.1
[2025-10-13 00:30:22]  workdir=None
[2025-10-13 00:30:22] ]
[2025-10-13 00:30:22] 2025-10-12 15:29:42,971 | INFO     | transferring file log.46676269._065366.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6838989051/log.46676269._065366.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 00:30:22] 2025-10-12 15:29:42,971 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6838989051/log.46676269._065366.job.log.tgz.1 /var/lib/boinc/slots/3/log.46676269._065366.job
[2025-10-13 00:30:22] 2025-10-12 15:29:42,981 | INFO     | adding to output.list: log.46676269._065366.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/1d/log.46676269._065366.job.log.tg
[2025-10-13 00:30:22] 2025-10-12 15:29:42,981 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:30:22] 2025-10-12 15:29:42,982 | INFO     | summary of transferred files:
[2025-10-13 00:30:22] 2025-10-12 15:29:42,982 | INFO     |  -- lfn=log.46676269._065366.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:30:22] 2025-10-12 15:29:42,982 | INFO     | stage-out finished correctly
[2025-10-13 00:30:22] 2025-10-12 15:29:43,724 | INFO     | time since job start (4354s) is within the limit (172800.0s)
[2025-10-13 00:30:22] 2025-10-12 15:29:45,513 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:30:22] 2025-10-12 15:29:45,568 | INFO     | job 6838989051 has state=finished
[2025-10-13 00:30:22] 2025-10-12 15:29:45,568 | INFO     | preparing for final server update for job 6838989051 in state='finished'
[2025-10-13 00:30:22] 2025-10-12 15:29:45,569 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:30:22] 2025-10-12 15:29:45,569 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:30:22] 2025-10-12 15:29:45,569 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:30:22] 2025-10-12 15:29:45,569 | INFO     | job 6838989051 has finished - writing final server update
[2025-10-13 00:30:22] 2025-10-12 15:29:45,569 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:30:22] 2025-10-12 15:29:45,569 | INFO     | executing command: lscpu
[2025-10-13 00:30:22] 2025-10-12 15:29:45,581 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:30:22] 2025-10-12 15:29:45,729 | INFO     | time since job start (4356s) is within the limit (172800.0s)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,606 | WARNING  | process 1794209 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:30:22] 2025-10-12 15:29:47,606 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838989051/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,635 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 00:30:22] 2025-10-12 15:29:47,637 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4199.98675
[2025-10-13 00:30:22] 2025-10-12 15:29:47,639 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838989051/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,640 | INFO     | extracted standard info from prmon json
[2025-10-13 00:30:22] 2025-10-12 15:29:47,640 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:30:22] 2025-10-12 15:29:47,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:30:22] 2025-10-12 15:29:47,640 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:30:22] 2025-10-12 15:29:47,640 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:30:22] 2025-10-12 15:29:47,641 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:30:22] 2025-10-12 15:29:47,641 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | sum of deviations: -6632357858.0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | mean x: 1760280905.0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | mean y: 2572844.153846154
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | -- intersect: 137133129481.73271
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | intersect: 137133129481.73271
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | chi2: 0.03920646479815319
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | -- intersect: 137133129481.73271
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | current memory leak: -77.90 B/s (using 65 data points, chi2=0.04)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,642 | INFO     | could have reported an average CPU frequency of 4202 MHz (6 samples)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | ..............................
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . Timing measurements:
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . get job = 0 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . initial setup = 5 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . payload setup = 2 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . stage-in = 0 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . payload execution = 4333 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . stage-out = 0 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | . log creation = 0 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,643 | INFO     | ..............................
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | 
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | job summary report
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | --------------------------------------------------
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | PanDA job id: 6838989051
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | task id: 46676269
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | errors: (none)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | pilot state: finished 
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | transexitcode: 0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | exeerrorcode: 0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | exeerrordiag: 
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | exitcode: 0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | exitmsg: OK
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | cpuconsumptiontime: 23736 s
[2025-10-13 00:30:22] 2025-10-12 15:29:47,702 | INFO     | nevents: 400
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | neventsw: 0
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | pid: 1794209
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | pgrp: 1794209
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | corecount: 6
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | event service: False
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2349147, 11: 2349175, 4340: 2375207, 4341: 2384205, 4343: 2384389, 4345: 2384583}
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | --------------------------------------------------
[2025-10-13 00:30:22] 2025-10-12 15:29:47,703 | INFO     | 
[2025-10-13 00:30:22] 2025-10-12 15:29:47,705 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | job 6838989051 has completed (purged errors)
[2025-10-13 00:30:22] 2025-10-12 15:29:47,717 | INFO     | overall cleanup function is called
[2025-10-13 00:30:22] 2025-10-12 15:29:47,724 | INFO     | number of running child processes to parent process 1794209: 1
[2025-10-13 00:30:22] 2025-10-12 15:29:47,724 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:30:22] 2025-10-12 15:29:47,724 | INFO     | aborting job monitoring since job object (job id=6838989051) has expired
[2025-10-13 00:30:22] 2025-10-12 15:29:48,723 | INFO     | --- collectZombieJob: --- 10, [1794209]
[2025-10-13 00:30:22] 2025-10-12 15:29:48,723 | INFO     | zombie collector waiting for pid 1794209
[2025-10-13 00:30:22] 2025-10-12 15:29:48,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:30:22] 2025-10-12 15:29:48,723 | INFO     | collected zombie processes
[2025-10-13 00:30:22] 2025-10-12 15:29:48,723 | INFO     | will attempt to kill all subprocesses of pid=1794209
[2025-10-13 00:30:22] 2025-10-12 15:29:48,775 | INFO     | process IDs to be killed: [1794209] (in reverse order)
[2025-10-13 00:30:22] 2025-10-12 15:29:48,797 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:30:22] 2025-10-12 15:29:48,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:30:22] 2025-10-12 15:29:48,799 | INFO     | did not find any defunct processes belonging to 1794209
[2025-10-13 00:30:22] 2025-10-12 15:29:48,801 | INFO     | did not find any defunct processes belonging to 1794209
[2025-10-13 00:30:22] 2025-10-12 15:29:48,801 | INFO     | ready for new job
[2025-10-13 00:30:22] 2025-10-12 15:29:48,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:30:22] 2025-10-12 15:29:48,802 | INFO     | ***************************************
[2025-10-13 00:30:22] 2025-10-12 15:29:48,802 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:30:22] 2025-10-12 15:29:48,802 | INFO     | ***************************************
[2025-10-13 00:30:22] 2025-10-12 15:29:48,802 | INFO     | 
[2025-10-13 00:30:22] 2025-10-12 15:29:48,802 | INFO     | architecture information:
[2025-10-13 00:30:22] 2025-10-12 15:29:48,803 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:30:22] 2025-10-12 15:29:48,810 | INFO     | cat /etc/os-release:
[2025-10-13 00:30:22] NAME="CentOS Linux"
[2025-10-13 00:30:22] VERSION="7 (Core)"
[2025-10-13 00:30:22] ID="centos"
[2025-10-13 00:30:22] ID_LIKE="rhel fedora"
[2025-10-13 00:30:22] VERSION_ID="7"
[2025-10-13 00:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:30:22] ANSI_COLOR="0;31"
[2025-10-13 00:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:30:22] HOME_URL="https://www.centos.org/"
[2025-10-13 00:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:30:22] 
[2025-10-13 00:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:30:22] 
[2025-10-13 00:30:22] 2025-10-12 15:29:48,810 | INFO     | ***************************************
[2025-10-13 00:30:22] 2025-10-12 15:29:49,312 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | INFO     | sufficient remaining disk space (301204504576 B)
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | INFO     | update_server=False
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:30:22] 2025-10-12 15:29:49,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:30:22] 2025-10-12 15:29:49,321 | INFO     | aborting loop
[2025-10-13 00:30:22] 2025-10-12 15:29:49,661 | INFO     | all payload control threads have been joined
[2025-10-13 00:30:22] 2025-10-12 15:29:50,237 | INFO     | all job control threads have been joined
[2025-10-13 00:30:22] 2025-10-12 15:29:50,257 | INFO     | all data control threads have been joined
[2025-10-13 00:30:22] 2025-10-12 15:29:50,325 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:50,325 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:50,326 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:50,416 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:50,666 | INFO     | [payload] control thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:50,969 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,237 | INFO     | [job] control thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,262 | INFO     | [data] control thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,326 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,354 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,408 | INFO     | [job] validate thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,408 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,451 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,515 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:51,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:30:22] 2025-10-12 15:29:55,577 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:29:59,973 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:30:22] 2025-10-12 15:30:00,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:30:22] 2025-10-12 15:30:16,368 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:30:22] 2025-10-12 15:30:17,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133949806400)>', '<ExcThread(monitor, started 140133055567616)>']
[2025-10-13 00:30:22] 2025-10-12 15:30:18,857 | INFO     | PID=1787435 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:30:22] 2025-10-12 15:30:18,857 | INFO     | .. there are 2 such processes running
[2025-10-13 00:30:22] 2025-10-12 15:30:18,857 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:30:22] 2025-10-12 15:30:18,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:30:22] 2025-10-12 15:30:18,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:30:22] 2025-10-12 15:30:18,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:30:22] 2025-10-12 15:30:18,858 | INFO     | [monitor] control thread has ended
[2025-10-13 00:30:22] 2025-10-12 15:30:22,318 | INFO     | all workflow threads have been joined
[2025-10-13 00:30:22] 2025-10-12 15:30:22,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:30:22] 2025-10-12 15:30:22,318 | INFO     | traces error code: 0
[2025-10-13 00:30:22] 2025-10-12 15:30:22,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:30:22] 2025-10-12 15:30:22,386 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:30:22] 2025-10-12 15:30:22,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:30:22] 2025-10-12 15:30:22,389 [wrapper] pilotpid: 1787435
[2025-10-13 00:30:22] 2025-10-12 15:30:22,390 [wrapper] Pilot exit status: 0
[2025-10-13 00:30:22] 2025-10-12 15:30:22,394 [wrapper] pandaids: 6838989051
[2025-10-13 00:30:22] 2025-10-12 15:30:22,407 [wrapper] cleanup supervisor_pilot 1825978 1787436
[2025-10-13 00:30:22] 2025-10-12 15:30:22,408 [wrapper] Test setup, not cleaning
[2025-10-13 00:30:22] 2025-10-12 15:30:22,409 [wrapper] apfmon messages muted
[2025-10-13 00:30:22] 2025-10-12 15:30:22,410 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:30:22] 2025-10-12 15:30:22,411 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:30:22]  *** Error codes and diagnostics ***
[2025-10-13 00:30:22]     "exeErrorCode": 0,
[2025-10-13 00:30:22]     "exeErrorDiag": "",
[2025-10-13 00:30:22]     "pilotErrorCode": 0,
[2025-10-13 00:30:22]     "pilotErrorDiag": "",
[2025-10-13 00:30:22]  *** Listing of results directory ***
[2025-10-13 00:30:22] total 408880
[2025-10-13 00:30:22] -rwx------. 1 boinc boinc     36292 Oct 12 06:39 runpilot2-wrapper.sh
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:39 queuedata.json
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:39 pilot3.tar.gz
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc       100 Oct 12 23:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:30:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 23:17 run_atlas
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc       105 Oct 12 23:17 job.xml
[2025-10-13 00:30:22] -rw-r--r--. 2 boinc boinc 222396774 Oct 12 23:17 EVNT.46676267._002625.pool.root.1
[2025-10-13 00:30:22] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:17 start_atlas.sh
[2025-10-13 00:30:22] drwxrwx--x. 2 boinc boinc        68 Oct 12 23:17 shared
[2025-10-13 00:30:22] -rw-r--r--. 2 boinc boinc    569673 Oct 12 23:17 input.tar.gz
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc      9628 Oct 12 23:17 init_data.xml
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc         0 Oct 12 23:17 boinc_lockfile
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc      2550 Oct 12 23:17 pandaJob.out
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc    975528 Oct 12 23:17 agis_schedconf.cvmfs.json
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc   1560580 Oct 12 23:17 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:30:22] drwx------. 5 boinc boinc      4096 Oct 12 23:17 pilot3
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc 190537093 Oct 13 00:29 HITS.46676269._065366.pool.root.1
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc        95 Oct 13 00:29 pilot_heartbeat.json
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc       529 Oct 13 00:29 boinc_task_state.xml
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc      1027 Oct 13 00:29 memory_monitor_summary.json
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc    282791 Oct 13 00:29 log.46676269._065366.job.log.tgz.1
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc      7793 Oct 13 00:29 heartbeat.json
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc        27 Oct 13 00:30 wrapper_checkpoint.txt
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc      8192 Oct 13 00:30 boinc_mmap_file
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc      4896 Oct 13 00:30 pilotlog.txt
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc    645891 Oct 13 00:30 log.46676269._065366.job.log.1
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc       357 Oct 13 00:30 output.list
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc       620 Oct 13 00:30 runtime_log
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc    952320 Oct 13 00:30 result.tar.gz
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc      8661 Oct 13 00:30 runtime_log.err
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc       642 Oct 13 00:30 MX5NDm1TwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLhhNDmyz77an.diag
[2025-10-13 00:30:22] -rw-r--r--. 1 boinc boinc     21456 Oct 13 00:30 stderr.txt
[2025-10-13 00:30:22] HITS file was successfully produced:
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc 190537093 Oct 13 00:29 shared/HITS.pool.root.1
[2025-10-13 00:30:22]  *** Contents of shared directory: ***
[2025-10-13 00:30:22] total 404768
[2025-10-13 00:30:22] -rw-r--r--. 2 boinc boinc 222396774 Oct 12 23:17 ATLAS.root_0
[2025-10-13 00:30:22] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:17 start_atlas.sh
[2025-10-13 00:30:22] -rw-r--r--. 2 boinc boinc    569673 Oct 12 23:17 input.tar.gz
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc 190537093 Oct 13 00:29 HITS.pool.root.1
[2025-10-13 00:30:22] -rw-------. 1 boinc boinc    952320 Oct 13 00:30 result.tar.gz
00:30:24 (1783620): run_atlas exited; CPU time 23761.557411
00:30:24 (1783620): called boinc_finish(0)

</stderr_txt>
]]>

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