Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:51:55 (3532491): wrapper (7.7.26015): starting
22:51:55 (3532491): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 22:51:55] Arguments: --nthreads 3
[2025-10-12 22:51:55] Threads: 3
[2025-10-12 22:51:55] Checking for CVMFS
[2025-10-12 22:51:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:51:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:51:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:51:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:51:55] 2.9.2.0 2084254 4861 88012 151636 3 57 23212215 36864001 0 130560 0 3814143 99.991 165221 912 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 22:51:55] CVMFS is ok
[2025-10-12 22:51:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:51:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:51:55] Further information can be found at the LHC@home message board.
[2025-10-12 22:51:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:51:55] Checking for apptainer binary...
[2025-10-12 22:51:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:51:55] Running /usr/bin/apptainer --version
[2025-10-12 22:51:55] apptainer version 1.4.1-1.1
[2025-10-12 22:51:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:51:55] atlasA091
[2025-10-12 22:51:55] apptainer works
[2025-10-12 22:51:55] Set ATHENA_PROC_NUMBER=3
[2025-10-12 22:51:55] Set ATHENA_CORE_NUMBER=3
[2025-10-12 22:51:55] Starting ATLAS job with PandaID=6839386679
[2025-10-12 22:51:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:14:21]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:14:21]  workdir=None
[2025-10-13 00:14:21] ]
[2025-10-13 00:14:21] 2025-10-12 22:13:40,485 | INFO     | transferring file log.46676269._070975.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839386679/log.46676269._070975.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 00:14:21] 2025-10-12 22:13:40,485 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839386679/log.46676269._070975.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0709
[2025-10-13 00:14:21] 2025-10-12 22:13:40,499 | INFO     | adding to output.list: log.46676269._070975.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/a1/log.46676269._070975.job.log.tg
[2025-10-13 00:14:21] 2025-10-12 22:13:40,499 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:14:21] 2025-10-12 22:13:40,499 | INFO     | summary of transferred files:
[2025-10-13 00:14:21] 2025-10-12 22:13:40,499 | INFO     |  -- lfn=log.46676269._070975.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:14:21] 2025-10-12 22:13:40,499 | INFO     | stage-out finished correctly
[2025-10-13 00:14:21] 2025-10-12 22:13:40,649 | INFO     | time since job start (4899s) is within the limit (172800.0s)
[2025-10-13 00:14:21] 2025-10-12 22:13:41,232 | INFO     | monitor loop #378: job 0:6839386679 is in state 'finished'
[2025-10-13 00:14:21] 2025-10-12 22:13:41,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:14:21] 2025-10-12 22:13:42,655 | INFO     | time since job start (4901s) is within the limit (172800.0s)
[2025-10-13 00:14:21] 2025-10-12 22:13:42,817 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:14:21] 2025-10-12 22:13:43,736 | INFO     | monitor loop #379: job 0:6839386679 is in state 'finished'
[2025-10-13 00:14:21] 2025-10-12 22:13:43,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:14:21] 2025-10-12 22:13:44,658 | INFO     | time since job start (4903s) is within the limit (172800.0s)
[2025-10-13 00:14:21] 2025-10-12 22:13:45,533 | INFO     | job 6839386679 has state=finished
[2025-10-13 00:14:21] 2025-10-12 22:13:45,533 | INFO     | preparing for final server update for job 6839386679 in state='finished'
[2025-10-13 00:14:21] 2025-10-12 22:13:45,533 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:14:21] 2025-10-12 22:13:45,533 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:14:21] 2025-10-12 22:13:45,533 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:14:21] 2025-10-12 22:13:45,534 | INFO     | job 6839386679 has finished - writing final server update
[2025-10-13 00:14:21] 2025-10-12 22:13:45,534 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:14:21] 2025-10-12 22:13:45,534 | INFO     | executing command: lscpu
[2025-10-13 00:14:21] 2025-10-12 22:13:45,550 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:14:21] 2025-10-12 22:13:46,240 | INFO     | monitor loop #380: job 0:6839386679 is in state 'finished'
[2025-10-13 00:14:21] 2025-10-12 22:13:46,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:14:21] 2025-10-12 22:13:46,663 | INFO     | time since job start (4905s) is within the limit (172800.0s)
[2025-10-13 00:14:21] 2025-10-12 22:13:48,670 | INFO     | time since job start (4907s) is within the limit (172800.0s)
[2025-10-13 00:14:21] 2025-10-12 22:13:48,743 | INFO     | monitor loop #381: job 0:6839386679 is in state 'finished'
[2025-10-13 00:14:21] 2025-10-12 22:13:48,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,265 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:14:21] 2025-10-12 22:13:49,266 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3813.1054999999997
[2025-10-13 00:14:21] 2025-10-12 22:13:49,267 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839386679/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,267 | INFO     | extracted standard info from prmon json
[2025-10-13 00:14:21] 2025-10-12 22:13:49,267 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:14:21] 2025-10-12 22:13:49,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:14:21] 2025-10-12 22:13:49,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:14:21] 2025-10-12 22:13:49,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:14:21] 2025-10-12 22:13:49,268 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:14:21] 2025-10-12 22:13:49,268 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | sum of deviations: -8676982088.0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | mean x: 1760304842.0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | mean y: 2431095.191780822
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | -- intersect: 126648316405.64853
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | intersect: 126648316405.64853
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | chi2: 0.09963128309973601
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | -- intersect: 126648316405.64853
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | current memory leak: -71.95 B/s (using 73 data points, chi2=0.10)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | could have reported an average CPU frequency of 3963 MHz (6 samples)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | ..............................
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . Timing measurements:
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . get job = 0 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . initial setup = 1 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . payload setup = 3 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . stage-in = 0 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . payload execution = 4878 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . stage-out = 0 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | . log creation = 0 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,269 | INFO     | ..............................
[2025-10-13 00:14:21] 2025-10-12 22:13:49,300 | INFO     | 
[2025-10-13 00:14:21] 2025-10-12 22:13:49,300 | INFO     | job summary report
[2025-10-13 00:14:21] 2025-10-12 22:13:49,300 | INFO     | --------------------------------------------------
[2025-10-13 00:14:21] 2025-10-12 22:13:49,300 | INFO     | PanDA job id: 6839386679
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | task id: 46676269
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | errors: (none)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | pilot state: finished 
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | transexitcode: 0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | exeerrorcode: 0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | exeerrordiag: 
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | exitcode: 0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | exitmsg: OK
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | cpuconsumptiontime: 13921 s
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | nevents: 400
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | neventsw: 0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | pid: 3542661
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | pgrp: 3542661
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | corecount: 3
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | event service: False
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 4885: 2375557, 4886: 2384561, 4888: 2384617, 4895: 2384939}
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | --------------------------------------------------
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | 
[2025-10-13 00:14:21] 2025-10-12 22:13:49,301 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:14:21] 2025-10-12 22:13:49,316 | INFO     | job 6839386679 has completed (purged errors)
[2025-10-13 00:14:21] 2025-10-12 22:13:49,316 | INFO     | overall cleanup function is called
[2025-10-13 00:14:21] 2025-10-12 22:13:49,738 | INFO     | PID=3536216 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:14:21] 2025-10-12 22:13:50,322 | INFO     | --- collectZombieJob: --- 10, [3542661]
[2025-10-13 00:14:21] 2025-10-12 22:13:50,323 | INFO     | zombie collector waiting for pid 3542661
[2025-10-13 00:14:21] 2025-10-12 22:13:50,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:14:21] 2025-10-12 22:13:50,323 | INFO     | collected zombie processes
[2025-10-13 00:14:21] 2025-10-12 22:13:50,323 | INFO     | will attempt to kill all subprocesses of pid=3542661
[2025-10-13 00:14:21] 2025-10-12 22:13:50,369 | INFO     | process IDs to be killed: [3542661] (in reverse order)
[2025-10-13 00:14:21] 2025-10-12 22:13:50,396 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:14:21] 2025-10-12 22:13:50,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:14:21] 2025-10-12 22:13:50,397 | INFO     | did not find any defunct processes belonging to 3542661
[2025-10-13 00:14:21] 2025-10-12 22:13:50,398 | INFO     | did not find any defunct processes belonging to 3542661
[2025-10-13 00:14:21] 2025-10-12 22:13:50,399 | INFO     | ready for new job
[2025-10-13 00:14:21] 2025-10-12 22:13:50,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:14:21] 2025-10-12 22:13:50,399 | INFO     | ***************************************
[2025-10-13 00:14:21] 2025-10-12 22:13:50,399 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:14:21] 2025-10-12 22:13:50,399 | INFO     | ***************************************
[2025-10-13 00:14:21] 2025-10-12 22:13:50,399 | INFO     | 
[2025-10-13 00:14:21] 2025-10-12 22:13:50,400 | INFO     | architecture information:
[2025-10-13 00:14:21] 2025-10-12 22:13:50,400 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:14:21] 2025-10-12 22:13:50,409 | INFO     | cat /etc/os-release:
[2025-10-13 00:14:21] NAME="CentOS Linux"
[2025-10-13 00:14:21] VERSION="7 (Core)"
[2025-10-13 00:14:21] ID="centos"
[2025-10-13 00:14:21] ID_LIKE="rhel fedora"
[2025-10-13 00:14:21] VERSION_ID="7"
[2025-10-13 00:14:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:14:21] ANSI_COLOR="0;31"
[2025-10-13 00:14:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:14:21] HOME_URL="https://www.centos.org/"
[2025-10-13 00:14:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:14:21] 
[2025-10-13 00:14:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:14:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:14:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:14:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:14:21] 
[2025-10-13 00:14:21] 2025-10-12 22:13:50,410 | INFO     | ***************************************
[2025-10-13 00:14:21] 2025-10-12 22:13:50,913 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 00:14:21] 2025-10-12 22:13:50,926 | INFO     | sufficient remaining disk space (380948709376 B)
[2025-10-13 00:14:21] 2025-10-12 22:13:50,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:14:21] 2025-10-12 22:13:50,927 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:14:21] 2025-10-12 22:13:50,927 | INFO     | update_server=False
[2025-10-13 00:14:21] 2025-10-12 22:13:50,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:14:21] 2025-10-12 22:13:50,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:14:21] 2025-10-12 22:13:51,011 | INFO     | all payload control threads have been joined
[2025-10-13 00:14:21] 2025-10-12 22:13:51,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:14:21] 2025-10-12 22:13:51,246 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 00:14:21] 2025-10-12 22:13:51,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 00:14:21] 2025-10-12 22:13:51,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:14:21] 2025-10-12 22:13:51,247 | INFO     | will abort loop
[2025-10-13 00:14:21] 2025-10-12 22:13:51,351 | INFO     | all job control threads have been joined
[2025-10-13 00:14:21] 2025-10-12 22:13:51,914 | INFO     | all data control threads have been joined
[2025-10-13 00:14:21] 2025-10-12 22:13:51,932 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:51,933 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,014 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,017 | INFO     | [payload] control thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,251 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,355 | INFO     | [job] control thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,505 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,611 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,771 | INFO     | [job] validate thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,877 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,919 | INFO     | [data] control thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:52,991 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:53,052 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:53,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:14:21] 2025-10-12 22:13:53,453 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:13:57,365 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:14:01,005 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:14:21] 2025-10-12 22:14:02,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:14:21] 2025-10-12 22:14:06,394 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:14:21] 2025-10-12 22:14:06,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633437660992)>', '<ExcThread(monitor, started 140632689452800)>']
[2025-10-13 00:14:21] 2025-10-12 22:14:11,893 | INFO     | all workflow threads have been joined
[2025-10-13 00:14:21] 2025-10-12 22:14:11,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:14:21] 2025-10-12 22:14:11,894 | INFO     | traces error code: 0
[2025-10-13 00:14:21] 2025-10-12 22:14:11,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:14:21] 2025-10-12 22:14:21,859 | INFO     | PID=3536216 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:14:21] 2025-10-12 22:14:21,860 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:14:21] 2025-10-12 22:14:21,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:14:21] 2025-10-12 22:14:21,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:14:21] 2025-10-12 22:14:21,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:14:21] 2025-10-12 22:14:21,860 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 00:14:21] 2025-10-12 22:14:21,860 | INFO     | [monitor] control thread has ended
[2025-10-13 00:14:21] 2025-10-12 22:14:21,909 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:14:21] 2025-10-12 22:14:21,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:14:21] 2025-10-12 22:14:21,914 [wrapper] pilotpid: 3536216
[2025-10-13 00:14:21] 2025-10-12 22:14:21,917 [wrapper] Pilot exit status: 0
[2025-10-13 00:14:21] 2025-10-12 22:14:21,924 [wrapper] pandaids: 6839386679
[2025-10-13 00:14:21] 2025-10-12 22:14:21,943 [wrapper] cleanup supervisor_pilot 3555092 3536217
[2025-10-13 00:14:21] 2025-10-12 22:14:21,945 [wrapper] Test setup, not cleaning
[2025-10-13 00:14:21] 2025-10-12 22:14:21,948 [wrapper] apfmon messages muted
[2025-10-13 00:14:21] 2025-10-12 22:14:21,950 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:14:21] 2025-10-12 22:14:21,953 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:14:21]  *** Error codes and diagnostics ***
[2025-10-13 00:14:21]     "exeErrorCode": 0,
[2025-10-13 00:14:21]     "exeErrorDiag": "",
[2025-10-13 00:14:21]     "pilotErrorCode": 0,
[2025-10-13 00:14:21]     "pilotErrorDiag": "",
[2025-10-13 00:14:21]  *** Listing of results directory ***
[2025-10-13 00:14:21] total 411340
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:11 pilot3.tar.gz
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:14 queuedata.json
[2025-10-13 00:14:21] -rwx------ 1 boinc boinc     36292 Oct 12 06:15 runpilot2-wrapper.sh
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:14:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:51 run_atlas
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:51 job.xml
[2025-10-13 00:14:21] -rw-r--r-- 2 boinc boinc 220641493 Oct 12 22:51 EVNT.46676267._003281.pool.root.1
[2025-10-13 00:14:21] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:51 input.tar.gz
[2025-10-13 00:14:21] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:51 start_atlas.sh
[2025-10-13 00:14:21] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:51 shared
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:51 boinc_setup_complete
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc      6445 Oct 12 22:51 init_data.xml
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:51 boinc_lockfile
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:51 pandaJob.out
[2025-10-13 00:14:21] -rw------- 1 boinc boinc    975536 Oct 12 22:52 agis_schedconf.cvmfs.json
[2025-10-13 00:14:21] -rw------- 1 boinc boinc   1560580 Oct 12 22:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:14:21] drwx------ 5 boinc boinc      4096 Oct 12 22:52 pilot3
[2025-10-13 00:14:21] -rw------- 1 boinc boinc 194695665 Oct 13 00:13 HITS.46676269._070975.pool.root.1
[2025-10-13 00:14:21] -rw------- 1 boinc boinc        95 Oct 13 00:13 pilot_heartbeat.json
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc       529 Oct 13 00:13 boinc_task_state.xml
[2025-10-13 00:14:21] -rw------- 1 boinc boinc      1019 Oct 13 00:13 memory_monitor_summary.json
[2025-10-13 00:14:21] -rw------- 1 boinc boinc    266187 Oct 13 00:13 log.46676269._070975.job.log.tgz.1
[2025-10-13 00:14:21] -rw------- 1 boinc boinc      7760 Oct 13 00:13 heartbeat.json
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:14 boinc_mmap_file
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:14 wrapper_checkpoint.txt
[2025-10-13 00:14:21] -rw------- 1 boinc boinc       817 Oct 13 00:14 pilotlog.txt
[2025-10-13 00:14:21] -rw------- 1 boinc boinc    722693 Oct 13 00:14 log.46676269._070975.job.log.1
[2025-10-13 00:14:21] -rw------- 1 boinc boinc       357 Oct 13 00:14 output.list
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:14 runtime_log
[2025-10-13 00:14:21] -rw------- 1 boinc boinc   1003520 Oct 13 00:14 result.tar.gz
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc      8792 Oct 13 00:14 runtime_log.err
[2025-10-13 00:14:21] -rw------- 1 boinc boinc       661 Oct 13 00:14 hKKKDmJf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwCTMDmIMbOEo.diag
[2025-10-13 00:14:21] -rw-r--r-- 1 boinc boinc     22312 Oct 13 00:14 stderr.txt
[2025-10-13 00:14:22] HITS file was successfully produced:
[2025-10-13 00:14:22] -rw------- 1 boinc boinc 194695665 Oct 13 00:13 shared/HITS.pool.root.1
[2025-10-13 00:14:22]  *** Contents of shared directory: ***
[2025-10-13 00:14:22] total 407172
[2025-10-13 00:14:22] -rw-r--r-- 2 boinc boinc 220641493 Oct 12 22:51 ATLAS.root_0
[2025-10-13 00:14:22] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:51 input.tar.gz
[2025-10-13 00:14:22] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:51 start_atlas.sh
[2025-10-13 00:14:22] -rw------- 1 boinc boinc 194695665 Oct 13 00:13 HITS.pool.root.1
[2025-10-13 00:14:22] -rw------- 1 boinc boinc   1003520 Oct 13 00:14 result.tar.gz
00:14:23 (3532491): run_atlas exited; CPU time 13938.646691
00:14:23 (3532491): called boinc_finish(0)

</stderr_txt>
]]>

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