Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:07:48 (4168375): wrapper (7.7.26015): starting
16:07:48 (4168375): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:07:48] Arguments: --nthreads 12
[2025-10-12 16:07:48] Threads: 12
[2025-10-12 16:07:48] Checking for CVMFS
[2025-10-12 16:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:07:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:07:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:07:49] 2.13.2.0 2591754 1478 49740 151623 3 188 4008679 4096000 0 130560 0 2201520 99.994 52398 1950 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 16:07:49] CVMFS is ok
[2025-10-12 16:07:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:07:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 16:07:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 16:07:49] Further information can be found at the LHC@home message board.
[2025-10-12 16:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:07:49] Checking for apptainer binary...
[2025-10-12 16:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:07:49] Running /usr/bin/apptainer --version
[2025-10-12 16:07:49] apptainer version 1.4.3
[2025-10-12 16:07:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:07:49] BoincUbuntu
[2025-10-12 16:07:49] apptainer works
[2025-10-12 16:07:49] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:07:49] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:07:49] Starting ATLAS job with PandaID=6838990594
[2025-10-12 16:07:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:47:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:47:07]  mtime=0
[2025-10-12 16:47:07]  protocol_id=None
[2025-10-12 16:47:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 16:47:07]  replicas=None
[2025-10-12 16:47:07]  scope=mc23_13p6TeV
[2025-10-12 16:47:07]  status=None
[2025-10-12 16:47:07]  status_code=0
[2025-10-12 16:47:07]  storage_token=
[2025-10-12 16:47:07]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6838990594/log.46676269._066247.job.log.tgz.1
[2025-10-12 16:47:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/94/log.46676269._066247.job.log.tgz.1
[2025-10-12 16:47:07]  workdir=None
[2025-10-12 16:47:07] ]
[2025-10-12 16:47:07] 2025-10-12 15:46:28,850 | INFO     | transferring file log.46676269._066247.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6838990594/log.46676269._066247.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 16:47:07] 2025-10-12 15:46:28,850 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6838990594/log.46676269._066247.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._066247.job
[2025-10-12 16:47:07] 2025-10-12 15:46:28,865 | INFO     | adding to output.list: log.46676269._066247.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/94/log.46676269._066247.job.log.tg
[2025-10-12 16:47:07] 2025-10-12 15:46:28,865 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:47:07] 2025-10-12 15:46:28,865 | INFO     | summary of transferred files:
[2025-10-12 16:47:07] 2025-10-12 15:46:28,865 | INFO     |  -- lfn=log.46676269._066247.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:47:07] 2025-10-12 15:46:28,866 | INFO     | stage-out finished correctly
[2025-10-12 16:47:07] 2025-10-12 15:46:30,111 | INFO     | monitor loop #179: job 0:6838990594 is in state 'finished'
[2025-10-12 16:47:07] 2025-10-12 15:46:30,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:47:07] 2025-10-12 15:46:30,382 | INFO     | time since job start (2316s) is within the limit (172800.0s)
[2025-10-12 16:47:07] 2025-10-12 15:46:31,437 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:47:07] 2025-10-12 15:46:32,087 | INFO     | job 6838990594 has state=finished
[2025-10-12 16:47:07] 2025-10-12 15:46:32,087 | INFO     | preparing for final server update for job 6838990594 in state='finished'
[2025-10-12 16:47:07] 2025-10-12 15:46:32,088 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:47:07] 2025-10-12 15:46:32,088 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:47:07] 2025-10-12 15:46:32,088 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:47:07] 2025-10-12 15:46:32,088 | INFO     | job 6838990594 has finished - writing final server update
[2025-10-12 16:47:07] 2025-10-12 15:46:32,088 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:47:07] 2025-10-12 15:46:32,089 | INFO     | executing command: lscpu
[2025-10-12 16:47:07] 2025-10-12 15:46:32,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:47:07] 2025-10-12 15:46:32,388 | INFO     | time since job start (2318s) is within the limit (172800.0s)
[2025-10-12 16:47:07] 2025-10-12 15:46:32,614 | INFO     | monitor loop #180: job 0:6838990594 is in state 'finished'
[2025-10-12 16:47:07] 2025-10-12 15:46:32,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:47:07] 2025-10-12 15:46:34,393 | INFO     | time since job start (2320s) is within the limit (172800.0s)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,001 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:47:07] 2025-10-12 15:46:35,003 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3810.3965624999996
[2025-10-12 16:47:07] 2025-10-12 15:46:35,004 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6838990594/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,005 | INFO     | extracted standard info from prmon json
[2025-10-12 16:47:07] 2025-10-12 15:46:35,005 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:47:07] 2025-10-12 15:46:35,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:47:07] 2025-10-12 15:46:35,005 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:47:07] 2025-10-12 15:46:35,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:47:07] 2025-10-12 15:46:35,005 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | sum of square deviations: 9228080.0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | sum of deviations: -856687965.0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | mean x: 1760282913.0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | mean y: 2755919.9677419355
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | -- intersect: 163418459572.5414
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | intersect: 163418459572.5414
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | chi2: 0.04472598172058157
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | -- intersect: 163418459572.5414
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | current memory leak: -92.83 B/s (using 31 data points, chi2=0.04)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | could have reported an average CPU frequency of 3743 MHz (5 samples)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | ..............................
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . Timing measurements:
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . get job = 0 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . initial setup = 1 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . payload setup = 2 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . stage-in = 0 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . payload execution = 2294 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . stage-out = 0 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | . log creation = 0 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,006 | INFO     | ..............................
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | 
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | job summary report
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | --------------------------------------------------
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | PanDA job id: 6838990594
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | task id: 46676269
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | errors: (none)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | pilot state: finished 
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | transexitcode: 0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | exeerrorcode: 0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | exeerrordiag: 
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | exitcode: 0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | exitmsg: OK
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | cpuconsumptiontime: 25563 s
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | nevents: 400
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | neventsw: 0
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | pid: 4178842
[2025-10-12 16:47:07] 2025-10-12 15:46:35,038 | INFO     | pgrp: 4178842
[2025-10-12 16:47:07] 2025-10-12 15:46:35,039 | INFO     | corecount: 12
[2025-10-12 16:47:07] 2025-10-12 15:46:35,039 | INFO     | event service: False
[2025-10-12 16:47:07] 2025-10-12 15:46:35,039 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 2300: 2374309, 2301: 2383307, 2303: 2383363, 2307: 2383717}
[2025-10-12 16:47:07] 2025-10-12 15:46:35,039 | INFO     | --------------------------------------------------
[2025-10-12 16:47:07] 2025-10-12 15:46:35,039 | INFO     | 
[2025-10-12 16:47:07] 2025-10-12 15:46:35,039 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:47:07] 2025-10-12 15:46:35,054 | INFO     | job 6838990594 has completed (purged errors)
[2025-10-12 16:47:07] 2025-10-12 15:46:35,054 | INFO     | overall cleanup function is called
[2025-10-12 16:47:07] 2025-10-12 15:46:36,061 | INFO     | --- collectZombieJob: --- 10, [4178842]
[2025-10-12 16:47:07] 2025-10-12 15:46:36,061 | INFO     | zombie collector waiting for pid 4178842
[2025-10-12 16:47:07] 2025-10-12 15:46:36,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:47:07] 2025-10-12 15:46:36,061 | INFO     | collected zombie processes
[2025-10-12 16:47:07] 2025-10-12 15:46:36,061 | INFO     | will attempt to kill all subprocesses of pid=4178842
[2025-10-12 16:47:07] 2025-10-12 15:46:36,108 | INFO     | process IDs to be killed: [4178842] (in reverse order)
[2025-10-12 16:47:07] 2025-10-12 15:46:36,136 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:47:07] 2025-10-12 15:46:36,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:47:07] 2025-10-12 15:46:36,138 | INFO     | did not find any defunct processes belonging to 4178842
[2025-10-12 16:47:07] 2025-10-12 15:46:36,140 | INFO     | did not find any defunct processes belonging to 4178842
[2025-10-12 16:47:07] 2025-10-12 15:46:36,140 | INFO     | ready for new job
[2025-10-12 16:47:07] 2025-10-12 15:46:36,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:47:07] 2025-10-12 15:46:36,141 | INFO     | ***************************************
[2025-10-12 16:47:07] 2025-10-12 15:46:36,141 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:47:07] 2025-10-12 15:46:36,141 | INFO     | ***************************************
[2025-10-12 16:47:07] 2025-10-12 15:46:36,141 | INFO     | 
[2025-10-12 16:47:07] 2025-10-12 15:46:36,141 | INFO     | architecture information:
[2025-10-12 16:47:07] 2025-10-12 15:46:36,141 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:47:07] 2025-10-12 15:46:36,151 | INFO     | cat /etc/os-release:
[2025-10-12 16:47:07] NAME="CentOS Linux"
[2025-10-12 16:47:07] VERSION="7 (Core)"
[2025-10-12 16:47:07] ID="centos"
[2025-10-12 16:47:07] ID_LIKE="rhel fedora"
[2025-10-12 16:47:07] VERSION_ID="7"
[2025-10-12 16:47:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:47:07] ANSI_COLOR="0;31"
[2025-10-12 16:47:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:47:07] HOME_URL="https://www.centos.org/"
[2025-10-12 16:47:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:47:07] 
[2025-10-12 16:47:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:47:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:47:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:47:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:47:07] 
[2025-10-12 16:47:07] 2025-10-12 15:46:36,151 | INFO     | ***************************************
[2025-10-12 16:47:07] 2025-10-12 15:46:36,654 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | INFO     | sufficient remaining disk space (410857242624 B)
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | INFO     | update_server=False
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:47:07] 2025-10-12 15:46:36,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:47:07] 2025-10-12 15:46:36,668 | INFO     | aborting loop
[2025-10-12 16:47:07] 2025-10-12 15:46:36,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:47:07] 2025-10-12 15:46:37,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:47:07] 2025-10-12 15:46:37,570 | INFO     | all data control threads have been joined
[2025-10-12 16:47:07] 2025-10-12 15:46:37,672 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:37,673 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:37,673 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:37,737 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,045 | INFO     | all payload control threads have been joined
[2025-10-12 16:47:07] 2025-10-12 15:46:38,051 | INFO     | all job control threads have been joined
[2025-10-12 16:47:07] 2025-10-12 15:46:38,090 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,450 | INFO     | [job] validate thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,486 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,575 | INFO     | [data] control thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,600 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,646 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:38,911 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:39,051 | INFO     | [payload] control thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:39,056 | INFO     | [job] control thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:39,153 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:41,480 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:47,337 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:47:07] 2025-10-12 15:46:48,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:47:07] 2025-10-12 15:46:58,020 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:47:07] 2025-10-12 15:46:58,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132969464944448)>', '<ExcThread(monitor, started 132968798467840)>']
[2025-10-12 16:47:07] 2025-10-12 15:47:03,298 | INFO     | all workflow threads have been joined
[2025-10-12 16:47:07] 2025-10-12 15:47:03,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:47:07] 2025-10-12 15:47:03,299 | INFO     | traces error code: 0
[2025-10-12 16:47:07] 2025-10-12 15:47:03,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:47:07] 2025-10-12 15:47:07,526 | INFO     | PID=4172187 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:47:07] 2025-10-12 15:47:07,532 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:47:07] 2025-10-12 15:47:07,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:47:07] 2025-10-12 15:47:07,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:47:07] 2025-10-12 15:47:07,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:47:07] 2025-10-12 15:47:07,532 | INFO     | [monitor] control thread has ended
[2025-10-12 16:47:07] 2025-10-12 15:47:07,606 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:47:07] 2025-10-12 15:47:07,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:47:07] 2025-10-12 15:47:07,609 [wrapper] pilotpid: 4172187
[2025-10-12 16:47:07] 2025-10-12 15:47:07,611 [wrapper] Pilot exit status: 0
[2025-10-12 16:47:07] 2025-10-12 15:47:07,618 [wrapper] pandaids: 6838990594
[2025-10-12 16:47:07] 2025-10-12 15:47:07,638 [wrapper] cleanup supervisor_pilot    5820 4172188
[2025-10-12 16:47:07] 2025-10-12 15:47:07,640 [wrapper] Test setup, not cleaning
[2025-10-12 16:47:07] 2025-10-12 15:47:07,642 [wrapper] apfmon messages muted
[2025-10-12 16:47:07] 2025-10-12 15:47:07,644 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:47:07] 2025-10-12 15:47:07,645 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:47:07]  *** Error codes and diagnostics ***
[2025-10-12 16:47:07]     "exeErrorCode": 0,
[2025-10-12 16:47:07]     "exeErrorDiag": "",
[2025-10-12 16:47:07]     "pilotErrorCode": 0,
[2025-10-12 16:47:07]     "pilotErrorDiag": "",
[2025-10-12 16:47:07]  *** Listing of results directory ***
[2025-10-12 16:47:07] total 409088
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:51 queuedata.json
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc    557409 Oct 11 23:51 pilot3.tar.gz
[2025-10-12 16:47:07] -rwx------ 1 boinc boinc     36292 Oct 11 23:52 runpilot2-wrapper.sh
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc       100 Oct 12 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:47:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 16:07 run_atlas
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc       105 Oct 12 16:07 job.xml
[2025-10-12 16:47:07] -rw-r--r-- 2 boinc boinc 222468850 Oct 12 16:07 EVNT.46676267._002665.pool.root.1
[2025-10-12 16:47:07] -rw-r--r-- 2 boinc boinc    569682 Oct 12 16:07 input.tar.gz
[2025-10-12 16:47:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:07 start_atlas.sh
[2025-10-12 16:47:07] drwxrwx--x 2 boinc boinc      4096 Oct 12 16:07 shared
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:07 boinc_setup_complete
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc      9236 Oct 12 16:07 init_data.xml
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:07 boinc_lockfile
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc      2550 Oct 12 16:07 pandaJob.out
[2025-10-12 16:47:07] -rw------- 1 boinc boinc    975528 Oct 12 16:07 agis_schedconf.cvmfs.json
[2025-10-12 16:47:07] -rw------- 1 boinc boinc   1560580 Oct 12 16:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:47:07] drwx------ 5 boinc boinc      4096 Oct 12 16:07 pilot3
[2025-10-12 16:47:07] -rw------- 1 boinc boinc 191097652 Oct 12 16:46 HITS.46676269._066247.pool.root.1
[2025-10-12 16:47:07] -rw------- 1 boinc boinc        95 Oct 12 16:46 pilot_heartbeat.json
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc       529 Oct 12 16:46 boinc_task_state.xml
[2025-10-12 16:47:07] -rw------- 1 boinc boinc      1014 Oct 12 16:46 memory_monitor_summary.json
[2025-10-12 16:47:07] -rw------- 1 boinc boinc    352175 Oct 12 16:46 log.46676269._066247.job.log.tgz.1
[2025-10-12 16:47:07] -rw------- 1 boinc boinc      7735 Oct 12 16:46 heartbeat.json
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc        27 Oct 12 16:46 wrapper_checkpoint.txt
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:46 boinc_mmap_file
[2025-10-12 16:47:07] -rw------- 1 boinc boinc       747 Oct 12 16:47 pilotlog.txt
[2025-10-12 16:47:07] -rw------- 1 boinc boinc    368440 Oct 12 16:47 log.46676269._066247.job.log.1
[2025-10-12 16:47:07] -rw------- 1 boinc boinc       357 Oct 12 16:47 output.list
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:47 runtime_log
[2025-10-12 16:47:07] -rw------- 1 boinc boinc    737280 Oct 12 16:47 result.tar.gz
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc      8685 Oct 12 16:47 runtime_log.err
[2025-10-12 16:47:07] -rw------- 1 boinc boinc       648 Oct 12 16:47 imYNDmAdxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYphNDmBnCMln.diag
[2025-10-12 16:47:07] -rw-r--r-- 1 boinc boinc     21733 Oct 12 16:47 stderr.txt
[2025-10-12 16:47:07] HITS file was successfully produced:
[2025-10-12 16:47:07] -rw------- 1 boinc boinc 191097652 Oct 12 16:46 shared/HITS.pool.root.1
[2025-10-12 16:47:07]  *** Contents of shared directory: ***
[2025-10-12 16:47:07] total 405180
[2025-10-12 16:47:07] -rw-r--r-- 2 boinc boinc 222468850 Oct 12 16:07 ATLAS.root_0
[2025-10-12 16:47:07] -rw-r--r-- 2 boinc boinc    569682 Oct 12 16:07 input.tar.gz
[2025-10-12 16:47:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:07 start_atlas.sh
[2025-10-12 16:47:07] -rw------- 1 boinc boinc 191097652 Oct 12 16:46 HITS.pool.root.1
[2025-10-12 16:47:07] -rw------- 1 boinc boinc    737280 Oct 12 16:47 result.tar.gz
16:47:09 (4168375): run_atlas exited; CPU time 25562.067161
16:47:09 (4168375): called boinc_finish(0)

</stderr_txt>
]]>

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