Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:43:05 (30922): wrapper (7.7.26015): starting
02:43:05 (30922): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 02:43:05] Arguments: --nthreads 8
[2025-10-12 02:43:05] Threads: 8
[2025-10-12 02:43:05] Checking for CVMFS
[2025-10-12 02:43:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:43:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:43:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:43:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:43:05] 2.11.2.0 3643 739 62032 151611 1 59 9755621 18432001 1833 130560 0 1145539 99.996 23830 32465 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:43:05] CVMFS is ok
[2025-10-12 02:43:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:43:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:43:05] Further information can be found at the LHC@home message board.
[2025-10-12 02:43:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:43:05] Checking for apptainer binary...
[2025-10-12 02:43:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:43:05] Running /usr/bin/apptainer --version
[2025-10-12 02:43:05] apptainer version 1.3.2-1.el7
[2025-10-12 02:43:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:43:06] c-206-15.aglt2.org
[2025-10-12 02:43:06] apptainer works
[2025-10-12 02:43:06] Set ATHENA_PROC_NUMBER=8
[2025-10-12 02:43:06] Set ATHENA_CORE_NUMBER=8
[2025-10-12 02:43:06] Starting ATLAS job with PandaID=6839386625
[2025-10-12 02:43:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:40:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:40:40] 2025-10-12 09:40:03,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:40:40] 2025-10-12 09:40:03,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:40:40] 2025-10-12 09:40:03,730 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:40:40] 2025-10-12 09:40:03,731 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 05:40:40] 2025-10-12 09:40:03,732 | INFO     | sum of deviations: 3550771203.999996
[2025-10-12 05:40:40] 2025-10-12 09:40:03,733 | INFO     | mean x: 1760256698.5
[2025-10-12 05:40:40] 2025-10-12 09:40:03,733 | INFO     | mean y: 2466446.804597701
[2025-10-12 05:40:40] 2025-10-12 09:40:03,733 | INFO     | -- intersect: -3823902741.8481145
[2025-10-12 05:40:40] 2025-10-12 09:40:03,733 | INFO     | intersect: -3823902741.8481145
[2025-10-12 05:40:40] 2025-10-12 09:40:03,734 | INFO     | chi2: 2.1514314960619547
[2025-10-12 05:40:40] 2025-10-12 09:40:03,734 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,735 | INFO     | sum of deviations: 14742989411.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,735 | INFO     | mean x: 1760256546.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,736 | INFO     | mean y: 2478624.928994083
[2025-10-12 05:40:40] 2025-10-12 09:40:03,736 | INFO     | -- intersect: -17337086050.94351
[2025-10-12 05:40:40] 2025-10-12 09:40:03,736 | INFO     | intersect: -17337086050.94351
[2025-10-12 05:40:40] 2025-10-12 09:40:03,736 | INFO     | chi2: 1.3780311659137534
[2025-10-12 05:40:40] 2025-10-12 09:40:03,737 | INFO     | current chi2=1.3780311659137534 (change=35.94817364921247 %)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,737 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,738 | INFO     | sum of deviations: 14263877568.500008
[2025-10-12 05:40:40] 2025-10-12 09:40:03,738 | INFO     | mean x: 1760256393.5
[2025-10-12 05:40:40] 2025-10-12 09:40:03,739 | INFO     | mean y: 2478058.1646341463
[2025-10-12 05:40:40] 2025-10-12 09:40:03,739 | INFO     | -- intersect: -18355282975.410927
[2025-10-12 05:40:40] 2025-10-12 09:40:03,739 | INFO     | intersect: -18355282975.410927
[2025-10-12 05:40:40] 2025-10-12 09:40:03,739 | INFO     | chi2: 1.3792410409139078
[2025-10-12 05:40:40] 2025-10-12 09:40:03,740 | INFO     | current chi2=1.3792410409139078 (change=-0.08779736119771257 %)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,740 | INFO     | right removable region: 163
[2025-10-12 05:40:40] 2025-10-12 09:40:03,740 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,742 | INFO     | sum of deviations: -20547940158.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,742 | INFO     | mean x: 1760256851.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,742 | INFO     | mean y: 2492930.6153846155
[2025-10-12 05:40:40] 2025-10-12 09:40:03,742 | INFO     | -- intersect: 24169396204.28976
[2025-10-12 05:40:40] 2025-10-12 09:40:03,742 | INFO     | intersect: 24169396204.28976
[2025-10-12 05:40:40] 2025-10-12 09:40:03,743 | INFO     | chi2: 0.8333577515953643
[2025-10-12 05:40:40] 2025-10-12 09:40:03,743 | INFO     | current chi2=0.8333577515953643 (change=61.26496460051052 %)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,743 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,744 | INFO     | sum of deviations: -17098284750.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,745 | INFO     | mean x: 1760257003.5
[2025-10-12 05:40:40] 2025-10-12 09:40:03,745 | INFO     | mean y: 2488812.4146341463
[2025-10-12 05:40:40] 2025-10-12 09:40:03,745 | INFO     | -- intersect: 22008169441.08003
[2025-10-12 05:40:40] 2025-10-12 09:40:03,745 | INFO     | intersect: 22008169441.08003
[2025-10-12 05:40:40] 2025-10-12 09:40:03,746 | INFO     | chi2: 0.816604631991172
[2025-10-12 05:40:40] 2025-10-12 09:40:03,746 | INFO     | current chi2=0.816604631991172 (change=2.010315446411879 %)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,746 | INFO     | left removable region: 20
[2025-10-12 05:40:40] 2025-10-12 09:40:03,746 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,747 | INFO     | sum of deviations: -2402123636.0000014
[2025-10-12 05:40:40] 2025-10-12 09:40:03,748 | INFO     | mean x: 1760256973.0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,748 | INFO     | mean y: 2497572.020979021
[2025-10-12 05:40:40] 2025-10-12 09:40:03,748 | INFO     | -- intersect: 4665934764.351073
[2025-10-12 05:40:40] 2025-10-12 09:40:03,748 | INFO     | intersect: 4665934764.351073
[2025-10-12 05:40:40] 2025-10-12 09:40:03,748 | INFO     | chi2: 0.012675652560474237
[2025-10-12 05:40:40] 2025-10-12 09:40:03,749 | INFO     | -- intersect: 4665934764.351073
[2025-10-12 05:40:40] 2025-10-12 09:40:03,749 | INFO     | current memory leak: -2.65 B/s (using 143 data points, chi2=0.01)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,749 | INFO     | could have reported an average CPU frequency of 2556 MHz (9 samples)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | ..............................
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | . Timing measurements:
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | . get job = 0 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | . initial setup = 2 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | . payload setup = 4 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | . stage-in = 0 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,750 | INFO     | . payload execution = 10574 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,751 | INFO     | . stage-out = 1 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,751 | INFO     | . log creation = 0 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,751 | INFO     | ..............................
[2025-10-12 05:40:40] 2025-10-12 09:40:03,856 | INFO     | 
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | job summary report
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | --------------------------------------------------
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | PanDA job id: 6839386625
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | task id: 46676269
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | errors: (none)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | pilot state: finished 
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | transexitcode: 0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | exeerrorcode: 0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | exeerrordiag: 
[2025-10-12 05:40:40] 2025-10-12 09:40:03,857 | INFO     | exitcode: 0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | exitmsg: OK
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | cpuconsumptiontime: 80821 s
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | nevents: 400
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | neventsw: 0
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | pid: 8758
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | pgrp: 8758
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | corecount: 8
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | event service: False
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 5: 2349175, 12: 2349231, 10582: 2378044, 10584: 2387042, 10585: 2387098, 10591: 2387356}
[2025-10-12 05:40:40] 2025-10-12 09:40:03,858 | INFO     | --------------------------------------------------
[2025-10-12 05:40:40] 2025-10-12 09:40:03,859 | INFO     | 
[2025-10-12 05:40:40] 2025-10-12 09:40:03,859 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 05:40:40] 2025-10-12 09:40:03,877 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,878 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,878 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:40:40] 2025-10-12 09:40:03,881 | INFO     | job 6839386625 has completed (purged errors)
[2025-10-12 05:40:40] 2025-10-12 09:40:03,882 | INFO     | overall cleanup function is called
[2025-10-12 05:40:40] 2025-10-12 09:40:04,891 | INFO     | --- collectZombieJob: --- 10, [8758]
[2025-10-12 05:40:40] 2025-10-12 09:40:04,891 | INFO     | zombie collector waiting for pid 8758
[2025-10-12 05:40:40] 2025-10-12 09:40:04,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:40:40] 2025-10-12 09:40:04,891 | INFO     | collected zombie processes
[2025-10-12 05:40:40] 2025-10-12 09:40:04,891 | INFO     | will attempt to kill all subprocesses of pid=8758
[2025-10-12 05:40:40] 2025-10-12 09:40:05,033 | INFO     | process IDs to be killed: [8758] (in reverse order)
[2025-10-12 05:40:40] 2025-10-12 09:40:05,075 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:40:40] 2025-10-12 09:40:05,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:40:40] 2025-10-12 09:40:05,081 | INFO     | did not find any defunct processes belonging to 8758
[2025-10-12 05:40:40] 2025-10-12 09:40:05,086 | INFO     | did not find any defunct processes belonging to 8758
[2025-10-12 05:40:40] 2025-10-12 09:40:05,087 | INFO     | ready for new job
[2025-10-12 05:40:40] 2025-10-12 09:40:05,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:40:40] 2025-10-12 09:40:05,089 | INFO     | ***************************************
[2025-10-12 05:40:40] 2025-10-12 09:40:05,089 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:40:40] 2025-10-12 09:40:05,089 | INFO     | ***************************************
[2025-10-12 05:40:40] 2025-10-12 09:40:05,089 | INFO     | 
[2025-10-12 05:40:40] 2025-10-12 09:40:05,090 | INFO     | architecture information:
[2025-10-12 05:40:40] 2025-10-12 09:40:05,091 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:40:40] 2025-10-12 09:40:05,102 | INFO     | cat /etc/os-release:
[2025-10-12 05:40:40] NAME="CentOS Linux"
[2025-10-12 05:40:40] VERSION="7 (Core)"
[2025-10-12 05:40:40] ID="centos"
[2025-10-12 05:40:40] ID_LIKE="rhel fedora"
[2025-10-12 05:40:40] VERSION_ID="7"
[2025-10-12 05:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:40:40] ANSI_COLOR="0;31"
[2025-10-12 05:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:40:40] HOME_URL="https://www.centos.org/"
[2025-10-12 05:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:40:40] 
[2025-10-12 05:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:40:40] 
[2025-10-12 05:40:40] 2025-10-12 09:40:05,102 | INFO     | ***************************************
[2025-10-12 05:40:40] 2025-10-12 09:40:05,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 05:40:40] 2025-10-12 09:40:05,625 | INFO     | sufficient remaining disk space (27934064640 B)
[2025-10-12 05:40:40] 2025-10-12 09:40:05,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:40:40] 2025-10-12 09:40:05,626 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:40:40] 2025-10-12 09:40:05,626 | INFO     | update_server=False
[2025-10-12 05:40:40] 2025-10-12 09:40:05,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:40:40] 2025-10-12 09:40:05,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:40:40] 2025-10-12 09:40:05,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:40:40] 2025-10-12 09:40:05,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:40:40] 2025-10-12 09:40:05,810 | INFO     | aborting loop
[2025-10-12 05:40:40] 2025-10-12 09:40:06,112 | INFO     | all data control threads have been joined
[2025-10-12 05:40:40] 2025-10-12 09:40:06,537 | INFO     | all payload control threads have been joined
[2025-10-12 05:40:40] 2025-10-12 09:40:06,631 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:06,632 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:06,713 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:06,810 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:06,815 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:06,917 | INFO     | all job control threads have been joined
[2025-10-12 05:40:40] 2025-10-12 09:40:07,116 | INFO     | [data] control thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,231 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,389 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,457 | INFO     | [job] validate thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,542 | INFO     | [payload] control thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,632 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,922 | INFO     | [job] control thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,931 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:07,945 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:08,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:40:40] 2025-10-12 09:40:12,462 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:16,325 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:40:40] 2025-10-12 09:40:17,330 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:40:40] 2025-10-12 09:40:34,079 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:40:40] 2025-10-12 09:40:35,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946473293632)>', '<ExcThread(monitor, started 139946039949056)>']
[2025-10-12 05:40:40] 2025-10-12 09:40:35,565 | INFO     | PID=2229 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 05:40:40] 2025-10-12 09:40:35,565 | INFO     | .. there are 3 such processes running
[2025-10-12 05:40:40] 2025-10-12 09:40:35,566 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:40:40] 2025-10-12 09:40:35,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:40:40] 2025-10-12 09:40:35,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:40:40] 2025-10-12 09:40:35,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:40:40] 2025-10-12 09:40:35,567 | INFO     | [monitor] control thread has ended
[2025-10-12 05:40:40] 2025-10-12 09:40:40,210 | INFO     | all workflow threads have been joined
[2025-10-12 05:40:40] 2025-10-12 09:40:40,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:40:40] 2025-10-12 09:40:40,210 | INFO     | traces error code: 0
[2025-10-12 05:40:40] 2025-10-12 09:40:40,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:40:40] 2025-10-12 09:40:40,346 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:40:40] 2025-10-12 09:40:40,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:40:40] 2025-10-12 09:40:40,351 [wrapper] pilotpid: 2229
[2025-10-12 05:40:40] 2025-10-12 09:40:40,353 [wrapper] Pilot exit status: 0
[2025-10-12 05:40:40] 2025-10-12 09:40:40,363 [wrapper] pandaids: 6839386625
[2025-10-12 05:40:40] 2025-10-12 09:40:40,395 [wrapper] cleanup supervisor_pilot  8901 2230
[2025-10-12 05:40:40] 2025-10-12 09:40:40,398 [wrapper] Test setup, not cleaning
[2025-10-12 05:40:40] 2025-10-12 09:40:40,400 [wrapper] apfmon messages muted
[2025-10-12 05:40:40] 2025-10-12 09:40:40,403 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:40:40] 2025-10-12 09:40:40,405 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:40:40]  *** Error codes and diagnostics ***
[2025-10-12 05:40:40]     "exeErrorCode": 0,
[2025-10-12 05:40:40]     "exeErrorDiag": "",
[2025-10-12 05:40:40]     "pilotErrorCode": 0,
[2025-10-12 05:40:40]     "pilotErrorDiag": "",
[2025-10-12 05:40:40]  *** Listing of results directory ***
[2025-10-12 05:40:40] total 412680
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:14 queuedata.json
[2025-10-12 05:40:40] -rwx------ 1 boincer umatlas     36292 Oct 12 00:15 runpilot2-wrapper.sh
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:40:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 02:43 run_atlas
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 02:43 job.xml
[2025-10-12 05:40:40] -rw-r--r-- 2 boincer umatlas 221352683 Oct 12 02:43 EVNT.46676267._003264.pool.root.1
[2025-10-12 05:40:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:43 start_atlas.sh
[2025-10-12 05:40:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 02:43 shared
[2025-10-12 05:40:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 02:43 input.tar.gz
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 02:43 boinc_lockfile
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 02:43 pandaJob.out
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas    975528 Oct 12 02:43 agis_schedconf.cvmfs.json
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas   1560580 Oct 12 02:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:40:40] drwx------ 5 boincer umatlas      4096 Oct 12 02:43 pilot3
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 05:36 init_data.xml
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas 193518061 Oct 12 05:39 HITS.46676269._070921.pool.root.1
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas       530 Oct 12 05:39 boinc_task_state.xml
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas      1056 Oct 12 05:39 memory_monitor_summary.json
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas    420109 Oct 12 05:39 log.46676269._070921.job.log.tgz.1
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas      7859 Oct 12 05:40 heartbeat.json
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:40 boinc_mmap_file
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas        28 Oct 12 05:40 wrapper_checkpoint.txt
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas        95 Oct 12 05:40 pilot_heartbeat.json
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas      4892 Oct 12 05:40 pilotlog.txt
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas   1484433 Oct 12 05:40 log.46676269._070921.job.log.1
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas       357 Oct 12 05:40 output.list
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:40 runtime_log
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas   1925120 Oct 12 05:40 result.tar.gz
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas       662 Oct 12 05:40 ynRNDmIf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmACTMDmiNEWTo.diag
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 05:40 runtime_log.err
[2025-10-12 05:40:40] -rw-r--r-- 1 boincer umatlas     20860 Oct 12 05:40 stderr.txt
[2025-10-12 05:40:40] HITS file was successfully produced:
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas 193518061 Oct 12 05:39 shared/HITS.pool.root.1
[2025-10-12 05:40:40]  *** Contents of shared directory: ***
[2025-10-12 05:40:40] total 407612
[2025-10-12 05:40:40] -rw-r--r-- 2 boincer umatlas 221352683 Oct 12 02:43 ATLAS.root_0
[2025-10-12 05:40:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:43 start_atlas.sh
[2025-10-12 05:40:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 02:43 input.tar.gz
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas 193518061 Oct 12 05:39 HITS.pool.root.1
[2025-10-12 05:40:40] -rw------- 1 boincer umatlas   1925120 Oct 12 05:40 result.tar.gz
05:40:42 (30922): run_atlas exited; CPU time 80931.856019
05:40:42 (30922): called boinc_finish(0)

</stderr_txt>
]]>

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