Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:42:50 (522273): wrapper (7.7.26015): starting
02:42:50 (522273): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 02:42:50] Arguments: --nthreads 9
[2025-10-12 02:42:50] Threads: 9
[2025-10-12 02:42:50] Checking for CVMFS
[2025-10-12 02:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:42:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:42:51] 2.13.2.0 5484 5332 119280 151611 3 458 28494195 40960001 11982 16776704 0 9399817 99.891 2431496 39347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:42:51] CVMFS is ok
[2025-10-12 02:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:42:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:42:51] Further information can be found at the LHC@home message board.
[2025-10-12 02:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:42:51] Checking for apptainer binary...
[2025-10-12 02:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:42:51] Running /usr/bin/apptainer --version
[2025-10-12 02:42:51] apptainer version 1.4.3-1.el9
[2025-10-12 02:42:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:42:52] c-210-35-1.aglt2.org
[2025-10-12 02:42:52] apptainer works
[2025-10-12 02:42:52] Set ATHENA_PROC_NUMBER=9
[2025-10-12 02:42:52] Set ATHENA_CORE_NUMBER=9
[2025-10-12 02:42:53] Starting ATLAS job with PandaID=6839386610
[2025-10-12 02:42:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:17:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:17:01] 2025-10-12 09:16:04,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:17:01] 2025-10-12 09:16:04,316 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:17:01] 2025-10-12 09:16:04,316 | INFO     | sum of square deviations: 1004898503.1891928
[2025-10-12 05:17:01] 2025-10-12 09:16:04,318 | INFO     | sum of deviations: 14603657351.837833
[2025-10-12 05:17:01] 2025-10-12 09:16:04,318 | INFO     | mean x: 1760256003.2702703
[2025-10-12 05:17:01] 2025-10-12 09:16:04,318 | INFO     | mean y: 2543519.054054054
[2025-10-12 05:17:01] 2025-10-12 09:16:04,318 | INFO     | -- intersect: -25578324042.88603
[2025-10-12 05:17:01] 2025-10-12 09:16:04,318 | INFO     | intersect: -25578324042.88603
[2025-10-12 05:17:01] 2025-10-12 09:16:04,319 | INFO     | chi2: 1.6346893131725992
[2025-10-12 05:17:01] 2025-10-12 09:16:04,319 | INFO     | sum of square deviations: 906447733.706295
[2025-10-12 05:17:01] 2025-10-12 09:16:04,320 | INFO     | sum of deviations: 14199272063.517473
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | mean x: 1760255850.7902098
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | mean y: 2542891.083916084
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | -- intersect: -27571415096.070385
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | intersect: -27571415096.070385
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | chi2: 1.6367921620269055
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | current chi2=1.6367921620269055 (change=-0.1286390531436843 %)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,321 | INFO     | right removable region: 142
[2025-10-12 05:17:01] 2025-10-12 09:16:04,322 | INFO     | sum of square deviations: 906387465.1188798
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | sum of deviations: -10372177171.468533
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | mean x: 1760256155.7972028
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | mean y: 2581692.3286713287
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | -- intersect: 20145941367.65479
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | intersect: 20145941367.65479
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | chi2: 0.08353145585918452
[2025-10-12 05:17:01] 2025-10-12 09:16:04,323 | INFO     | current chi2=0.08353145585918452 (change=94.89007145357384 %)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,325 | INFO     | sum of square deviations: 814553395.2173878
[2025-10-12 05:17:01] 2025-10-12 09:16:04,326 | INFO     | sum of deviations: -11264686587.086948
[2025-10-12 05:17:01] 2025-10-12 09:16:04,326 | INFO     | mean x: 1760256308.3043478
[2025-10-12 05:17:01] 2025-10-12 09:16:04,326 | INFO     | mean y: 2583072.9782608696
[2025-10-12 05:17:01] 2025-10-12 09:16:04,326 | INFO     | -- intersect: 24345659588.790077
[2025-10-12 05:17:01] 2025-10-12 09:16:04,326 | INFO     | intersect: 24345659588.790077
[2025-10-12 05:17:01] 2025-10-12 09:16:04,327 | INFO     | chi2: 0.05873157502539617
[2025-10-12 05:17:01] 2025-10-12 09:16:04,327 | INFO     | current chi2=0.05873157502539617 (change=29.68927163869314 %)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,327 | INFO     | sum of square deviations: 729147078.9172926
[2025-10-12 05:17:01] 2025-10-12 09:16:04,328 | INFO     | sum of deviations: -8285941028.255638
[2025-10-12 05:17:01] 2025-10-12 09:16:04,328 | INFO     | mean x: 1760256460.8045113
[2025-10-12 05:17:01] 2025-10-12 09:16:04,328 | INFO     | mean y: 2577743.7593984962
[2025-10-12 05:17:01] 2025-10-12 09:16:04,329 | INFO     | -- intersect: 20005923640.022102
[2025-10-12 05:17:01] 2025-10-12 09:16:04,329 | INFO     | intersect: 20005923640.022102
[2025-10-12 05:17:01] 2025-10-12 09:16:04,329 | INFO     | chi2: 0.05274061212946878
[2025-10-12 05:17:01] 2025-10-12 09:16:04,329 | INFO     | current chi2=0.05274061212946878 (change=10.200582724602283 %)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,329 | INFO     | left removable region: 30
[2025-10-12 05:17:01] 2025-10-12 09:16:04,330 | INFO     | sum of square deviations: 435434007.0625
[2025-10-12 05:17:01] 2025-10-12 09:16:04,330 | INFO     | sum of deviations: 1101635932.4375
[2025-10-12 05:17:01] 2025-10-12 09:16:04,331 | INFO     | mean x: 1760256735.1875
[2025-10-12 05:17:01] 2025-10-12 09:16:04,331 | INFO     | mean y: 2557939.8839285714
[2025-10-12 05:17:01] 2025-10-12 09:16:04,331 | INFO     | -- intersect: -4450842663.526759
[2025-10-12 05:17:01] 2025-10-12 09:16:04,331 | INFO     | intersect: -4450842663.526759
[2025-10-12 05:17:01] 2025-10-12 09:16:04,331 | INFO     | chi2: 0.0005094898007080991
[2025-10-12 05:17:01] 2025-10-12 09:16:04,331 | INFO     | -- intersect: -4450842663.526759
[2025-10-12 05:17:01] 2025-10-12 09:16:04,332 | INFO     | current memory leak: 2.53 B/s (using 112 data points, chi2=0.00)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,332 | INFO     | could have reported an average CPU frequency of 2626 MHz (8 samples)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | ..............................
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . Timing measurements:
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . get job = 0 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . initial setup = 3 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . payload setup = 25 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . stage-in = 0 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . payload execution = 9037 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . stage-out = 2 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | . log creation = 0 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,333 | INFO     | ..............................
[2025-10-12 05:17:01] 2025-10-12 09:16:04,450 | INFO     | 
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | job summary report
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | --------------------------------------------------
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | PanDA job id: 6839386610
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | task id: 46676269
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | errors: (none)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | pilot state: finished 
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | transexitcode: 0
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | exeerrorcode: 0
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | exeerrordiag: 
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | exitcode: 0
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | exitmsg: OK
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | cpuconsumptiontime: 43038 s
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | nevents: 400
[2025-10-12 05:17:01] 2025-10-12 09:16:04,451 | INFO     | neventsw: 0
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | pid: 532538
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | pgrp: 532538
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | corecount: 9
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | event service: False
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2349143, 24: 2349231, 34: 2349387, 9067: 2377902, 9071: 2386900, 9073: 2386956, 9093: 2387150}
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | --------------------------------------------------
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | 
[2025-10-12 05:17:01] 2025-10-12 09:16:04,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 05:17:01] 2025-10-12 09:16:04,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | job 6839386610 has completed (purged errors)
[2025-10-12 05:17:01] 2025-10-12 09:16:04,474 | INFO     | overall cleanup function is called
[2025-10-12 05:17:01] 2025-10-12 09:16:05,483 | INFO     | --- collectZombieJob: --- 10, [532538]
[2025-10-12 05:17:01] 2025-10-12 09:16:05,483 | INFO     | zombie collector waiting for pid 532538
[2025-10-12 05:17:01] 2025-10-12 09:16:05,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:17:01] 2025-10-12 09:16:05,483 | INFO     | collected zombie processes
[2025-10-12 05:17:01] 2025-10-12 09:16:05,483 | INFO     | will attempt to kill all subprocesses of pid=532538
[2025-10-12 05:17:01] 2025-10-12 09:16:06,849 | INFO     | process IDs to be killed: [532538] (in reverse order)
[2025-10-12 05:17:01] 2025-10-12 09:16:06,974 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:17:01] 2025-10-12 09:16:06,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:17:01] 2025-10-12 09:16:07,025 | INFO     | did not find any defunct processes belonging to 532538
[2025-10-12 05:17:01] 2025-10-12 09:16:07,054 | INFO     | did not find any defunct processes belonging to 532538
[2025-10-12 05:17:01] 2025-10-12 09:16:07,055 | INFO     | ready for new job
[2025-10-12 05:17:01] 2025-10-12 09:16:07,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:17:01] 2025-10-12 09:16:07,096 | INFO     | ***************************************
[2025-10-12 05:17:01] 2025-10-12 09:16:07,096 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:17:01] 2025-10-12 09:16:07,096 | INFO     | ***************************************
[2025-10-12 05:17:01] 2025-10-12 09:16:07,096 | INFO     | 
[2025-10-12 05:17:01] 2025-10-12 09:16:07,139 | INFO     | architecture information:
[2025-10-12 05:17:01] 2025-10-12 09:16:07,154 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:17:01] 2025-10-12 09:16:07,290 | INFO     | cat /etc/os-release:
[2025-10-12 05:17:01] NAME="CentOS Linux"
[2025-10-12 05:17:01] VERSION="7 (Core)"
[2025-10-12 05:17:01] ID="centos"
[2025-10-12 05:17:01] ID_LIKE="rhel fedora"
[2025-10-12 05:17:01] VERSION_ID="7"
[2025-10-12 05:17:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:17:01] ANSI_COLOR="0;31"
[2025-10-12 05:17:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:17:01] HOME_URL="https://www.centos.org/"
[2025-10-12 05:17:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:17:01] 
[2025-10-12 05:17:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:17:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:17:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:17:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:17:01] 
[2025-10-12 05:17:01] 2025-10-12 09:16:07,290 | INFO     | ***************************************
[2025-10-12 05:17:01] 2025-10-12 09:16:07,793 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 05:17:01] 2025-10-12 09:16:08,008 | INFO     | sufficient remaining disk space (74354524160 B)
[2025-10-12 05:17:01] 2025-10-12 09:16:08,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:17:01] 2025-10-12 09:16:08,009 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:17:01] 2025-10-12 09:16:08,009 | INFO     | update_server=False
[2025-10-12 05:17:01] 2025-10-12 09:16:08,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:17:01] 2025-10-12 09:16:08,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:17:01] 2025-10-12 09:16:08,226 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 05:17:01] 2025-10-12 09:16:08,226 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 05:17:01] 2025-10-12 09:16:08,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:17:01] 2025-10-12 09:16:08,227 | INFO     | will abort loop
[2025-10-12 05:17:01] 2025-10-12 09:16:08,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:17:01] 2025-10-12 09:16:08,760 | INFO     | all data control threads have been joined
[2025-10-12 05:17:01] 2025-10-12 09:16:09,015 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:09,208 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:09,232 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:09,370 | INFO     | all payload control threads have been joined
[2025-10-12 05:17:01] 2025-10-12 09:16:09,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:17:01] 2025-10-12 09:16:09,477 | INFO     | all job control threads have been joined
[2025-10-12 05:17:01] 2025-10-12 09:16:09,765 | INFO     | [data] control thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:09,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,032 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,072 | INFO     | [job] validate thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,215 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,323 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,376 | INFO     | [payload] control thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,402 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,411 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,420 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,480 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:10,489 | INFO     | [job] control thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:12,247 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:17:01] 2025-10-12 09:16:36,297 | INFO     | PID=526032 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 05:17:01] 2025-10-12 09:16:36,297 | INFO     | .. there are 9 such processes running
[2025-10-12 05:17:01] 2025-10-12 09:16:36,298 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:17:01] 2025-10-12 09:16:36,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:17:01] 2025-10-12 09:16:36,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:17:01] 2025-10-12 09:16:53,288 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:17:01] 2025-10-12 09:16:55,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046064490304)>', '<ExcThread(monitor, started 140045587572480)>']
[2025-10-12 05:17:01] 2025-10-12 09:16:55,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:17:01] 2025-10-12 09:16:55,410 | INFO     | [monitor] control thread has ended
[2025-10-12 05:17:01] 2025-10-12 09:17:00,210 | INFO     | all workflow threads have been joined
[2025-10-12 05:17:01] 2025-10-12 09:17:00,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:17:01] 2025-10-12 09:17:00,211 | INFO     | traces error code: 0
[2025-10-12 05:17:01] 2025-10-12 09:17:00,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:17:01] 2025-10-12 09:17:00,986 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:17:01] 2025-10-12 09:17:00,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:17:01] 2025-10-12 09:17:01,011 [wrapper] pilotpid: 526032
[2025-10-12 05:17:01] 2025-10-12 09:17:01,024 [wrapper] Pilot exit status: 0
[2025-10-12 05:17:01] 2025-10-12 09:17:01,161 [wrapper] pandaids: 6839386610
[2025-10-12 05:17:01] 2025-10-12 09:17:01,232 [wrapper] cleanup supervisor_pilot  765786 526033
[2025-10-12 05:17:01] 2025-10-12 09:17:01,237 [wrapper] Test setup, not cleaning
[2025-10-12 05:17:01] 2025-10-12 09:17:01,256 [wrapper] apfmon messages muted
[2025-10-12 05:17:01] 2025-10-12 09:17:01,307 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:17:01] 2025-10-12 09:17:01,363 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:17:01]  *** Error codes and diagnostics ***
[2025-10-12 05:17:01]     "exeErrorCode": 0,
[2025-10-12 05:17:01]     "exeErrorDiag": "",
[2025-10-12 05:17:01]     "pilotErrorCode": 0,
[2025-10-12 05:17:01]     "pilotErrorDiag": "",
[2025-10-12 05:17:01]  *** Listing of results directory ***
[2025-10-12 05:17:01] total 414328
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:14 queuedata.json
[2025-10-12 05:17:01] -rwx------. 1 boincer umatlas     36292 Oct 12 00:15 runpilot2-wrapper.sh
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas       100 Oct 12 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:17:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 02:42 run_atlas
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas       105 Oct 12 02:42 job.xml
[2025-10-12 05:17:01] -rw-r--r--. 2 boincer umatlas 221352683 Oct 12 02:42 EVNT.46676267._003264.pool.root.1
[2025-10-12 05:17:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 02:42 start_atlas.sh
[2025-10-12 05:17:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 02:42 shared
[2025-10-12 05:17:01] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 02:42 input.tar.gz
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas         0 Oct 12 02:42 boinc_lockfile
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 02:42 pandaJob.out
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas    975528 Oct 12 02:43 agis_schedconf.cvmfs.json
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas   1560580 Oct 12 02:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:17:01] drwx------. 5 boincer umatlas      4096 Oct 12 02:43 pilot3
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 05:12 init_data.xml
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas 195716072 Oct 12 05:14 HITS.46676269._070906.pool.root.1
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas       530 Oct 12 05:14 boinc_task_state.xml
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas      1038 Oct 12 05:15 memory_monitor_summary.json
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas    396988 Oct 12 05:15 log.46676269._070906.job.log.tgz.1
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas      7822 Oct 12 05:16 heartbeat.json
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas        95 Oct 12 05:16 pilot_heartbeat.json
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas      5008 Oct 12 05:17 pilotlog.txt
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas   1249524 Oct 12 05:17 log.46676269._070906.job.log.1
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas       357 Oct 12 05:17 output.list
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas       620 Oct 12 05:17 runtime_log
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas   1669120 Oct 12 05:17 result.tar.gz
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 05:17 boinc_mmap_file
[2025-10-12 05:17:01] -rw-------. 1 boincer umatlas       654 Oct 12 05:17 VnyMDmIf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvBTMDmDssbEm.diag
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas      8713 Oct 12 05:17 runtime_log.err
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas        27 Oct 12 05:17 wrapper_checkpoint.txt
[2025-10-12 05:17:01] -rw-r--r--. 1 boincer umatlas     21038 Oct 12 05:17 stderr.txt
[2025-10-12 05:17:01] HITS file was successfully produced:
[2025-10-12 05:17:02] -rw-------. 1 boincer umatlas 195716072 Oct 12 05:14 shared/HITS.pool.root.1
[2025-10-12 05:17:02]  *** Contents of shared directory: ***
[2025-10-12 05:17:02] total 409512
[2025-10-12 05:17:02] -rw-r--r--. 2 boincer umatlas 221352683 Oct 12 02:42 ATLAS.root_0
[2025-10-12 05:17:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 02:42 start_atlas.sh
[2025-10-12 05:17:02] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 02:42 input.tar.gz
[2025-10-12 05:17:02] -rw-------. 1 boincer umatlas 195716072 Oct 12 05:14 HITS.pool.root.1
[2025-10-12 05:17:02] -rw-------. 1 boincer umatlas   1669120 Oct 12 05:17 result.tar.gz
05:17:03 (522273): run_atlas exited; CPU time 43153.511753
05:17:03 (522273): called boinc_finish(0)

</stderr_txt>
]]>

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