Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:30 (1779850): wrapper (7.7.26015): starting
08:00:30 (1779850): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 08:00:30] Arguments: --nthreads 4
[2025-10-13 08:00:30] Threads: 4
[2025-10-13 08:00:30] Checking for CVMFS
[2025-10-13 08:00:30] No cvmfs_config command found, will try listing directly
[2025-10-13 08:00:30] CVMFS is ok
[2025-10-13 08:00:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:00:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:00:30] Further information can be found at the LHC@home message board.
[2025-10-13 08:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:00:30] Checking for apptainer binary...
[2025-10-13 08:00:30] which: no apptainer in ((null))
[2025-10-13 08:00:30] apptainer is not installed, using version from CVMFS
[2025-10-13 08:00:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:00:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-10-13 08:00:31] apptainer works
[2025-10-13 08:00:31] Set ATHENA_PROC_NUMBER=4
[2025-10-13 08:00:31] Set ATHENA_CORE_NUMBER=4
[2025-10-13 08:00:31] Starting ATLAS job with PandaID=6839386550
[2025-10-13 08:00:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:15:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:15:28] 2025-10-13 08:58:02,093 | INFO     | monitor loop #774: job 0:6839386550 is in state 'finished'
[2025-10-13 11:15:28] 2025-10-13 08:58:02,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:15:28] 2025-10-13 08:58:03,971 | INFO     | time since job start (10643s) is within the limit (172800.0s)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,120 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 11:15:28] 2025-10-13 08:58:04,129 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2828.4420312500006
[2025-10-13 11:15:28] 2025-10-13 08:58:04,140 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6839386550/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,141 | INFO     | extracted standard info from prmon json
[2025-10-13 11:15:28] 2025-10-13 08:58:04,141 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:15:28] 2025-10-13 08:58:04,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:15:28] 2025-10-13 08:58:04,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:15:28] 2025-10-13 08:58:04,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:15:28] 2025-10-13 08:58:04,145 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:15:28] 2025-10-13 08:58:04,145 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 11:15:28] 2025-10-13 08:58:04,146 | INFO     | sum of deviations: 17745827871.000004
[2025-10-13 11:15:28] 2025-10-13 08:58:04,146 | INFO     | mean x: 1760340542.5
[2025-10-13 11:15:28] 2025-10-13 08:58:04,146 | INFO     | mean y: 2326542.0344827585
[2025-10-13 11:15:28] 2025-10-13 08:58:04,147 | INFO     | -- intersect: -19121779006.482
[2025-10-13 11:15:28] 2025-10-13 08:58:04,147 | INFO     | intersect: -19121779006.482
[2025-10-13 11:15:28] 2025-10-13 08:58:04,147 | INFO     | chi2: 1.3476258542743254
[2025-10-13 11:15:28] 2025-10-13 08:58:04,147 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,148 | INFO     | sum of deviations: 17229776106.000004
[2025-10-13 11:15:28] 2025-10-13 08:58:04,148 | INFO     | mean x: 1760340390.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,148 | INFO     | mean y: 2325966.650887574
[2025-10-13 11:15:28] 2025-10-13 08:58:04,148 | INFO     | -- intersect: -20262970243.28663
[2025-10-13 11:15:28] 2025-10-13 08:58:04,148 | INFO     | intersect: -20262970243.28663
[2025-10-13 11:15:28] 2025-10-13 08:58:04,149 | INFO     | chi2: 1.3487014562388584
[2025-10-13 11:15:28] 2025-10-13 08:58:04,149 | INFO     | current chi2=1.3487014562388584 (change=-0.07981458363398945 %)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,149 | INFO     | right removable region: 168
[2025-10-13 11:15:28] 2025-10-13 08:58:04,149 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,150 | INFO     | sum of deviations: -5007428145.999996
[2025-10-13 11:15:28] 2025-10-13 08:58:04,150 | INFO     | mean x: 1760340695.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,150 | INFO     | mean y: 2351547.1242603553
[2025-10-13 11:15:28] 2025-10-13 08:58:04,150 | INFO     | -- intersect: 5891983054.026736
[2025-10-13 11:15:28] 2025-10-13 08:58:04,150 | INFO     | intersect: 5891983054.026736
[2025-10-13 11:15:28] 2025-10-13 08:58:04,151 | INFO     | chi2: 0.009872479344067441
[2025-10-13 11:15:28] 2025-10-13 08:58:04,151 | INFO     | current chi2=0.009872479344067441 (change=99.26741689373542 %)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,151 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,152 | INFO     | sum of deviations: -4666222755.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,152 | INFO     | mean x: 1760340847.5
[2025-10-13 11:15:28] 2025-10-13 08:58:04,152 | INFO     | mean y: 2351137.0853658537
[2025-10-13 11:15:28] 2025-10-13 08:58:04,152 | INFO     | -- intersect: 6008117222.601995
[2025-10-13 11:15:28] 2025-10-13 08:58:04,152 | INFO     | intersect: 6008117222.601995
[2025-10-13 11:15:28] 2025-10-13 08:58:04,153 | INFO     | chi2: 0.009698083561683135
[2025-10-13 11:15:28] 2025-10-13 08:58:04,153 | INFO     | current chi2=0.009698083561683135 (change=1.7664841455363838 %)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,153 | INFO     | left removable region: 20
[2025-10-13 11:15:28] 2025-10-13 08:58:04,153 | INFO     | sum of square deviations: 1005179777.0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,154 | INFO     | sum of deviations: -2645342622.5000005
[2025-10-13 11:15:28] 2025-10-13 08:58:04,154 | INFO     | mean x: 1760340969.5
[2025-10-13 11:15:28] 2025-10-13 08:58:04,154 | INFO     | mean y: 2348698.9797297297
[2025-10-13 11:15:28] 2025-10-13 08:58:04,154 | INFO     | -- intersect: 4635057298.280692
[2025-10-13 11:15:28] 2025-10-13 08:58:04,154 | INFO     | intersect: 4635057298.280692
[2025-10-13 11:15:28] 2025-10-13 08:58:04,155 | INFO     | chi2: 0.008307125621328123
[2025-10-13 11:15:28] 2025-10-13 08:58:04,155 | INFO     | -- intersect: 4635057298.280692
[2025-10-13 11:15:28] 2025-10-13 08:58:04,155 | INFO     | current memory leak: -2.63 B/s (using 148 data points, chi2=0.01)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,155 | INFO     | could have reported an average CPU frequency of 2682 MHz (9 samples)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,155 | INFO     | ..............................
[2025-10-13 11:15:28] 2025-10-13 08:58:04,155 | INFO     | . Timing measurements:
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . get job = 0 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . initial setup = 1 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . payload setup = 5 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . stage-in = 0 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . payload execution = 10608 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . stage-out = 0 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | . log creation = 0 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,156 | INFO     | ..............................
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | 
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | job summary report
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | --------------------------------------------------
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | PanDA job id: 6839386550
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | task id: 46676269
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | errors: (none)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | pilot state: finished 
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | transexitcode: 0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,245 | INFO     | exeerrorcode: 0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | exeerrordiag: 
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | exitcode: 0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | exitmsg: OK
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | cpuconsumptiontime: 41086 s
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | nevents: 400
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | neventsw: 0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | pid: 1823164
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | pgrp: 1823164
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | corecount: 4
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | event service: False
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | sizes: {0: 2348697, 1: 2348896, 5: 2349158, 11: 2349214, 10617: 2378264, 10620: 2387468, 10628: 2387670}
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | --------------------------------------------------
[2025-10-13 11:15:28] 2025-10-13 08:58:04,246 | INFO     | 
[2025-10-13 11:15:28] 2025-10-13 08:58:04,247 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-10-13 11:15:28] 2025-10-13 08:58:04,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:15:28] 2025-10-13 08:58:04,268 | INFO     | job 6839386550 has completed (purged errors)
[2025-10-13 11:15:28] 2025-10-13 08:58:04,268 | INFO     | overall cleanup function is called
[2025-10-13 11:15:28] 2025-10-13 08:58:05,274 | INFO     | --- collectZombieJob: --- 10, [1823164]
[2025-10-13 11:15:28] 2025-10-13 08:58:05,274 | INFO     | zombie collector waiting for pid 1823164
[2025-10-13 11:15:28] 2025-10-13 08:58:05,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:15:28] 2025-10-13 08:58:05,274 | INFO     | collected zombie processes
[2025-10-13 11:15:28] 2025-10-13 08:58:05,274 | INFO     | will attempt to kill all subprocesses of pid=1823164
[2025-10-13 11:15:28] 2025-10-13 08:58:05,610 | INFO     | process IDs to be killed: [1823164] (in reverse order)
[2025-10-13 11:15:28] 2025-10-13 08:58:05,716 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:15:28] 2025-10-13 08:58:05,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:15:28] 2025-10-13 08:58:05,730 | INFO     | did not find any defunct processes belonging to 1823164
[2025-10-13 11:15:28] 2025-10-13 08:58:05,741 | INFO     | did not find any defunct processes belonging to 1823164
[2025-10-13 11:15:28] 2025-10-13 08:58:05,741 | INFO     | ready for new job
[2025-10-13 11:15:28] 2025-10-13 08:58:05,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:15:28] 2025-10-13 08:58:05,744 | INFO     | ***************************************
[2025-10-13 11:15:28] 2025-10-13 08:58:05,744 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:15:28] 2025-10-13 08:58:05,744 | INFO     | ***************************************
[2025-10-13 11:15:28] 2025-10-13 08:58:05,744 | INFO     | 
[2025-10-13 11:15:28] 2025-10-13 08:58:05,748 | INFO     | architecture information:
[2025-10-13 11:15:28] 2025-10-13 08:58:05,748 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:15:28] 2025-10-13 08:58:05,764 | INFO     | cat /etc/os-release:
[2025-10-13 11:15:28] NAME="CentOS Linux"
[2025-10-13 11:15:28] VERSION="7 (Core)"
[2025-10-13 11:15:28] ID="centos"
[2025-10-13 11:15:28] ID_LIKE="rhel fedora"
[2025-10-13 11:15:28] VERSION_ID="7"
[2025-10-13 11:15:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:15:28] ANSI_COLOR="0;31"
[2025-10-13 11:15:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:15:28] HOME_URL="https://www.centos.org/"
[2025-10-13 11:15:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:15:28] 
[2025-10-13 11:15:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:15:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:15:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:15:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:15:28] 
[2025-10-13 11:15:28] 2025-10-13 08:58:05,764 | INFO     | ***************************************
[2025-10-13 11:15:28] 2025-10-13 08:58:06,267 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-10-13 11:15:28] 2025-10-13 08:58:06,282 | INFO     | sufficient remaining disk space (694249586688 B)
[2025-10-13 11:15:28] 2025-10-13 08:58:06,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:15:28] 2025-10-13 08:58:06,282 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:15:28] 2025-10-13 08:58:06,282 | INFO     | update_server=False
[2025-10-13 11:15:28] 2025-10-13 08:58:06,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:15:28] 2025-10-13 08:58:06,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:15:28] 2025-10-13 08:58:06,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:15:28] 2025-10-13 08:58:06,283 | INFO     | aborting loop
[2025-10-13 11:15:28] 2025-10-13 08:58:06,403 | INFO     | all job control threads have been joined
[2025-10-13 11:15:28] 2025-10-13 08:58:06,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:15:28] 2025-10-13 08:58:06,898 | INFO     | all data control threads have been joined
[2025-10-13 11:15:28] 2025-10-13 08:58:07,143 | INFO     | all payload control threads have been joined
[2025-10-13 11:15:28] 2025-10-13 08:58:07,288 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:07,289 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:07,406 | INFO     | [job] control thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:07,661 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:07,904 | INFO     | [data] control thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:07,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,149 | INFO     | [payload] control thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,289 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,365 | INFO     | [job] validate thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,644 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,655 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,661 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,735 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:08,752 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:09,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:15:28] 2025-10-13 08:58:10,261 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:10,633 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:15:28] 2025-10-13 08:58:37,445 | INFO     | PID=1790179 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:15:28] 2025-10-13 08:58:37,446 | INFO     | .. there are 4 such processes running
[2025-10-13 11:15:28] 2025-10-13 08:58:37,446 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:15:28] 2025-10-13 08:58:37,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:15:28] 2025-10-13 08:58:37,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:15:28] 2025-10-13 08:58:57,199 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:15:28] 2025-10-13 08:58:59,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22507555628864)>', '<ExcThread(monitor, started 22507316803328)>']
[2025-10-13 11:15:28] 2025-10-13 08:58:59,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:15:28] 2025-10-13 08:58:59,549 | INFO     | [monitor] control thread has ended
[2025-10-13 11:15:28] 2025-10-13 08:59:04,125 | INFO     | all workflow threads have been joined
[2025-10-13 11:15:28] 2025-10-13 08:59:04,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:15:28] 2025-10-13 08:59:04,126 | INFO     | traces error code: 0
[2025-10-13 11:15:28] 2025-10-13 08:59:04,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:15:28] 2025-10-13 08:59:04,250 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:15:28] 2025-10-13 08:59:04,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:15:28] 2025-10-13 08:59:04,255 [wrapper] pilotpid: 1790179
[2025-10-13 11:15:28] 2025-10-13 08:59:04,257 [wrapper] Pilot exit status: 0
[2025-10-13 11:15:28] 2025-10-13 08:59:04,266 [wrapper] pandaids: 6839386550
[2025-10-13 11:15:28] 2025-10-13 08:59:04,332 [wrapper] cleanup supervisor_pilot 2041053 1790180
[2025-10-13 11:15:28] 2025-10-13 08:59:04,335 [wrapper] Test setup, not cleaning
[2025-10-13 11:15:28] 2025-10-13 08:59:04,338 [wrapper] apfmon messages muted
[2025-10-13 11:15:28] 2025-10-13 08:59:04,340 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:15:28] 2025-10-13 08:59:04,342 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:15:28]  *** Error codes and diagnostics ***
[2025-10-13 11:15:28]     "exeErrorCode": 0,
[2025-10-13 11:15:28]     "exeErrorDiag": "",
[2025-10-13 11:15:28]     "pilotErrorCode": 0,
[2025-10-13 11:15:28]     "pilotErrorDiag": "",
[2025-10-13 11:15:28]  *** Listing of results directory ***
[2025-10-13 11:15:28] total 421188
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:04 pilot3.tar.gz
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:10 queuedata.json
[2025-10-13 11:15:28] -rwx------ 1 boinc boinc     36292 Oct 12 06:10 runpilot2-wrapper.sh
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:15:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 08:00 run_atlas
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 08:00 job.xml
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc      6634 Oct 13 08:00 init_data.xml
[2025-10-13 11:15:28] -rw-r--r-- 2 boinc boinc 223863993 Oct 13 08:00 EVNT.46676267._003259.pool.root.1
[2025-10-13 11:15:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:00 start_atlas.sh
[2025-10-13 11:15:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 08:00 shared
[2025-10-13 11:15:28] -rw-r--r-- 2 boinc boinc    569677 Oct 13 08:00 input.tar.gz
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:00 boinc_lockfile
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 08:00 pandaJob.out
[2025-10-13 11:15:28] -rw------- 1 boinc boinc    973230 Oct 13 08:00 agis_schedconf.cvmfs.json
[2025-10-13 11:15:28] -rw------- 1 boinc boinc   1560580 Oct 13 08:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:15:28] drwx------ 5 boinc boinc      4096 Oct 13 08:00 pilot3
[2025-10-13 11:15:28] -rw------- 1 boinc boinc 199774178 Oct 13 10:57 HITS.46676269._070846.pool.root.1
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc       528 Oct 13 10:57 boinc_task_state.xml
[2025-10-13 11:15:28] -rw------- 1 boinc boinc        95 Oct 13 10:57 pilot_heartbeat.json
[2025-10-13 11:15:28] -rw------- 1 boinc boinc      1033 Oct 13 10:57 memory_monitor_summary.json
[2025-10-13 11:15:28] -rw------- 1 boinc boinc    362079 Oct 13 10:57 log.46676269._070846.job.log.tgz.1
[2025-10-13 11:15:28] -rw------- 1 boinc boinc      7829 Oct 13 10:58 heartbeat.json
[2025-10-13 11:15:28] -rw------- 1 boinc boinc      4833 Oct 13 10:59 pilotlog.txt
[2025-10-13 11:15:28] -rw------- 1 boinc boinc   1517105 Oct 13 10:59 log.46676269._070846.job.log.1
[2025-10-13 11:15:28] -rw------- 1 boinc boinc       357 Oct 13 10:59 output.list
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:59 runtime_log
[2025-10-13 11:15:28] -rw------- 1 boinc boinc   1894400 Oct 13 10:59 result.tar.gz
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc      9070 Oct 13 10:59 runtime_log.err
[2025-10-13 11:15:28] -rw------- 1 boinc boinc       664 Oct 13 10:59 iIwKDmEb2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlATMDmsmn6wm.diag
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc        26 Oct 13 11:15 wrapper_checkpoint.txt
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:15 boinc_mmap_file
[2025-10-13 11:15:28] -rw-r--r-- 1 boinc boinc     20919 Oct 13 11:15 stderr.txt
[2025-10-13 11:15:28] HITS file was successfully produced:
[2025-10-13 11:15:28] -rw------- 1 boinc boinc 199774178 Oct 13 10:57 shared/HITS.pool.root.1
[2025-10-13 11:15:28]  *** Contents of shared directory: ***
[2025-10-13 11:15:28] total 416148
[2025-10-13 11:15:28] -rw-r--r-- 2 boinc boinc 223863993 Oct 13 08:00 ATLAS.root_0
[2025-10-13 11:15:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:00 start_atlas.sh
[2025-10-13 11:15:28] -rw-r--r-- 2 boinc boinc    569677 Oct 13 08:00 input.tar.gz
[2025-10-13 11:15:28] -rw------- 1 boinc boinc 199774178 Oct 13 10:57 HITS.pool.root.1
[2025-10-13 11:15:28] -rw------- 1 boinc boinc   1894400 Oct 13 10:59 result.tar.gz
11:15:30 (1779850): run_atlas exited; CPU time 41504.082374
11:15:30 (1779850): called boinc_finish(0)

</stderr_txt>
]]>

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