Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:16:57 (3024695): wrapper (7.7.26015): starting
15:16:57 (3024695): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:16:57] Arguments: --nthreads 8
[2025-10-12 15:16:57] Threads: 8
[2025-10-12 15:16:57] Checking for CVMFS
[2025-10-12 15:16:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:16:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:16:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:16:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:16:57] 2.13.2.0 1338992 4478 58908 151621 3 56 3136293 4097025 0 130560 0 4628162 99.993 153435 26782 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 15:16:57] CVMFS is ok
[2025-10-12 15:16:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:16:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:16:57] Further information can be found at the LHC@home message board.
[2025-10-12 15:16:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:16:57] Checking for apptainer binary...
[2025-10-12 15:16:57] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 15:16:57] apptainer is not installed, using version from CVMFS
[2025-10-12 15:16:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:16:58] pckeatlas02
[2025-10-12 15:16:58] apptainer works
[2025-10-12 15:16:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:16:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:16:58] Starting ATLAS job with PandaID=6839386261
[2025-10-12 15:16:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:38:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:38:16]  is_tar=False
[2025-10-12 16:38:16]  lfn=log.46676269._070613.job.log.tgz.1
[2025-10-12 16:38:16]  mtime=0
[2025-10-12 16:38:16]  protocol_id=None
[2025-10-12 16:38:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 16:38:16]  replicas=None
[2025-10-12 16:38:16]  scope=mc23_13p6TeV
[2025-10-12 16:38:16]  status=None
[2025-10-12 16:38:16]  status_code=0
[2025-10-12 16:38:16]  storage_token=
[2025-10-12 16:38:16]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6839386261/log.46676269._070613.job.log.tgz.1
[2025-10-12 16:38:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/fc/log.46676269._070613.job.log.tgz.1
[2025-10-12 16:38:16]  workdir=None
[2025-10-12 16:38:16] ]
[2025-10-12 16:38:16] 2025-10-12 14:37:35,013 | INFO     | transferring file log.46676269._070613.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6839386261/log.46676269._070613.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 16:38:16] 2025-10-12 14:37:35,013 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6839386261/log.46676269._070613.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._070613.j
[2025-10-12 16:38:16] 2025-10-12 14:37:35,021 | INFO     | adding to output.list: log.46676269._070613.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/fc/log.46676269._070613.job.log.tg
[2025-10-12 16:38:16] 2025-10-12 14:37:35,021 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:38:16] 2025-10-12 14:37:35,021 | INFO     | summary of transferred files:
[2025-10-12 16:38:16] 2025-10-12 14:37:35,021 | INFO     |  -- lfn=log.46676269._070613.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:38:16] 2025-10-12 14:37:35,021 | INFO     | stage-out finished correctly
[2025-10-12 16:38:16] 2025-10-12 14:37:35,093 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:38:16] 2025-10-12 14:37:35,127 | INFO     | job 6839386261 has state=finished
[2025-10-12 16:38:16] 2025-10-12 14:37:35,128 | INFO     | preparing for final server update for job 6839386261 in state='finished'
[2025-10-12 16:38:16] 2025-10-12 14:37:35,128 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:38:16] 2025-10-12 14:37:35,128 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:38:16] 2025-10-12 14:37:35,128 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:38:16] 2025-10-12 14:37:35,128 | INFO     | job 6839386261 has finished - writing final server update
[2025-10-12 16:38:16] 2025-10-12 14:37:35,128 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:38:16] 2025-10-12 14:37:35,129 | INFO     | executing command: lscpu
[2025-10-12 16:38:16] 2025-10-12 14:37:35,137 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:38:16] 2025-10-12 14:37:35,530 | WARNING  | process 3035733 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 16:38:16] 2025-10-12 14:37:35,530 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6839386261/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:38:16] 2025-10-12 14:37:35,564 | INFO     | number of running child processes to parent process 3035733: 1
[2025-10-12 16:38:16] 2025-10-12 14:37:35,564 | INFO     | maximum number of monitored processes: 6
[2025-10-12 16:38:16] 2025-10-12 14:37:36,561 | INFO     | time since job start (4834s) is within the limit (172800.0s)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,735 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:38:16] 2025-10-12 14:37:37,736 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3842.013375
[2025-10-12 16:38:16] 2025-10-12 14:37:37,737 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6839386261/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,737 | INFO     | extracted standard info from prmon json
[2025-10-12 16:38:16] 2025-10-12 14:37:37,737 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:38:16] 2025-10-12 14:37:37,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:38:16] 2025-10-12 14:37:37,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:38:16] 2025-10-12 14:37:37,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:38:16] 2025-10-12 14:37:37,738 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:38:16] 2025-10-12 14:37:37,738 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | sum of deviations: -15125760690.0
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | mean x: 1760277510.5
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | mean y: 2806327.777777778
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | -- intersect: 230097305482.00598
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | intersect: 230097305482.00598
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | chi2: 0.11835884345725411
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | -- intersect: 230097305482.00598
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | current memory leak: -130.71 B/s (using 72 data points, chi2=0.12)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | could have reported an average CPU frequency of 3749 MHz (6 samples)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | ..............................
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . Timing measurements:
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . get job = 0 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . initial setup = 0 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . payload setup = 3 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . stage-in = 0 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . payload execution = 4815 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . stage-out = 0 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | . log creation = 0 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,739 | INFO     | ..............................
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | 
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | job summary report
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | --------------------------------------------------
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | PanDA job id: 6839386261
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | task id: 46676269
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | errors: (none)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | pilot state: finished 
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | transexitcode: 0
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | exeerrorcode: 0
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | exeerrordiag: 
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | exitcode: 0
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | exitmsg: OK
[2025-10-12 16:38:16] 2025-10-12 14:37:37,776 | INFO     | cpuconsumptiontime: 36467 s
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | nevents: 400
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | neventsw: 0
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | pid: 3035733
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | pgrp: 3035733
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | corecount: 8
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | event service: False
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | sizes: {0: 2348858, 2: 2349120, 10: 2349148, 4819: 2375462, 4820: 2384462, 4821: 2384518, 4823: 2384840}
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | --------------------------------------------------
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | 
[2025-10-12 16:38:16] 2025-10-12 14:37:37,777 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | job 6839386261 has completed (purged errors)
[2025-10-12 16:38:16] 2025-10-12 14:37:37,787 | INFO     | overall cleanup function is called
[2025-10-12 16:38:16] 2025-10-12 14:37:38,793 | INFO     | --- collectZombieJob: --- 10, [3035733]
[2025-10-12 16:38:16] 2025-10-12 14:37:38,793 | INFO     | zombie collector waiting for pid 3035733
[2025-10-12 16:38:16] 2025-10-12 14:37:38,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:38:16] 2025-10-12 14:37:38,793 | INFO     | collected zombie processes
[2025-10-12 16:38:16] 2025-10-12 14:37:38,793 | INFO     | will attempt to kill all subprocesses of pid=3035733
[2025-10-12 16:38:16] 2025-10-12 14:37:38,825 | INFO     | process IDs to be killed: [3035733] (in reverse order)
[2025-10-12 16:38:16] 2025-10-12 14:37:38,841 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:38:16] 2025-10-12 14:37:38,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:38:16] 2025-10-12 14:37:38,842 | INFO     | did not find any defunct processes belonging to 3035733
[2025-10-12 16:38:16] 2025-10-12 14:37:38,843 | INFO     | did not find any defunct processes belonging to 3035733
[2025-10-12 16:38:16] 2025-10-12 14:37:38,843 | INFO     | ready for new job
[2025-10-12 16:38:16] 2025-10-12 14:37:38,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:38:16] 2025-10-12 14:37:38,844 | INFO     | ***************************************
[2025-10-12 16:38:16] 2025-10-12 14:37:38,844 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:38:16] 2025-10-12 14:37:38,844 | INFO     | ***************************************
[2025-10-12 16:38:16] 2025-10-12 14:37:38,844 | INFO     | 
[2025-10-12 16:38:16] 2025-10-12 14:37:38,844 | INFO     | architecture information:
[2025-10-12 16:38:16] 2025-10-12 14:37:38,844 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:38:16] 2025-10-12 14:37:38,849 | INFO     | cat /etc/os-release:
[2025-10-12 16:38:16] NAME="CentOS Linux"
[2025-10-12 16:38:16] VERSION="7 (Core)"
[2025-10-12 16:38:16] ID="centos"
[2025-10-12 16:38:16] ID_LIKE="rhel fedora"
[2025-10-12 16:38:16] VERSION_ID="7"
[2025-10-12 16:38:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:38:16] ANSI_COLOR="0;31"
[2025-10-12 16:38:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:38:16] HOME_URL="https://www.centos.org/"
[2025-10-12 16:38:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:38:16] 
[2025-10-12 16:38:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:38:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:38:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:38:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:38:16] 
[2025-10-12 16:38:16] 2025-10-12 14:37:38,850 | INFO     | ***************************************
[2025-10-12 16:38:16] 2025-10-12 14:37:39,352 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | INFO     | sufficient remaining disk space (118250012672 B)
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | INFO     | update_server=False
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:38:16] 2025-10-12 14:37:39,360 | INFO     | aborting loop
[2025-10-12 16:38:16] 2025-10-12 14:37:39,647 | INFO     | all payload control threads have been joined
[2025-10-12 16:38:16] 2025-10-12 14:37:40,050 | INFO     | all data control threads have been joined
[2025-10-12 16:38:16] 2025-10-12 14:37:40,362 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,365 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,366 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,372 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:38:16] 2025-10-12 14:37:40,652 | INFO     | [payload] control thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,684 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,783 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:40,940 | INFO     | all job control threads have been joined
[2025-10-12 16:38:16] 2025-10-12 14:37:41,056 | INFO     | [data] control thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:41,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:38:16] 2025-10-12 14:37:41,218 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:41,383 | INFO     | [job] validate thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:41,459 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:41,533 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:41,946 | INFO     | [job] control thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:42,228 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:38:16] 2025-10-12 14:37:42,572 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:43,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:37:45,138 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:38:16] 2025-10-12 14:38:09,527 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:38:16] 2025-10-12 14:38:09,695 | INFO     | PID=3028432 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:38:16] 2025-10-12 14:38:09,695 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:38:16] 2025-10-12 14:38:09,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:38:16] 2025-10-12 14:38:09,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:38:16] 2025-10-12 14:38:11,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340456478528)>', '<ExcThread(monitor, started 140339885086464)>']
[2025-10-12 16:38:16] 2025-10-12 14:38:11,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:38:16] 2025-10-12 14:38:11,706 | INFO     | [monitor] control thread has ended
[2025-10-12 16:38:16] 2025-10-12 14:38:16,256 | INFO     | all workflow threads have been joined
[2025-10-12 16:38:16] 2025-10-12 14:38:16,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:38:16] 2025-10-12 14:38:16,256 | INFO     | traces error code: 0
[2025-10-12 16:38:16] 2025-10-12 14:38:16,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:38:16] 2025-10-12 14:38:16,310 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:38:16] 2025-10-12 14:38:16,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:38:16] 2025-10-12 14:38:16,312 [wrapper] pilotpid: 3028432
[2025-10-12 16:38:16] 2025-10-12 14:38:16,313 [wrapper] Pilot exit status: 0
[2025-10-12 16:38:16] 2025-10-12 14:38:16,317 [wrapper] pandaids: 6839386261
[2025-10-12 16:38:16] 2025-10-12 14:38:16,326 [wrapper] cleanup supervisor_pilot 3052366 3028433
[2025-10-12 16:38:16] 2025-10-12 14:38:16,327 [wrapper] Test setup, not cleaning
[2025-10-12 16:38:16] 2025-10-12 14:38:16,329 [wrapper] apfmon messages muted
[2025-10-12 16:38:16] 2025-10-12 14:38:16,330 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:38:16] 2025-10-12 14:38:16,331 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:38:16]  *** Error codes and diagnostics ***
[2025-10-12 16:38:16]     "exeErrorCode": 0,
[2025-10-12 16:38:16]     "exeErrorDiag": "",
[2025-10-12 16:38:16]     "pilotErrorCode": 0,
[2025-10-12 16:38:16]     "pilotErrorDiag": "",
[2025-10-12 16:38:16]  *** Listing of results directory ***
[2025-10-12 16:38:16] total 416656
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:04 pilot3.tar.gz
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:08 queuedata.json
[2025-10-12 16:38:16] -rwx------. 1 boinc boinc     36292 Oct 12 06:09 runpilot2-wrapper.sh
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc       100 Oct 12 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:38:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 15:16 run_atlas
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc       105 Oct 12 15:16 job.xml
[2025-10-12 16:38:16] -rw-r--r--. 2 boinc boinc 221814616 Oct 12 15:16 EVNT.46676267._003244.pool.root.1
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc      6275 Oct 12 15:16 init_data.xml
[2025-10-12 16:38:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:16 start_atlas.sh
[2025-10-12 16:38:16] drwxrwx--x. 2 boinc boinc        68 Oct 12 15:16 shared
[2025-10-12 16:38:16] -rw-r--r--. 2 boinc boinc    569677 Oct 12 15:16 input.tar.gz
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc         0 Oct 12 15:16 boinc_lockfile
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc      2550 Oct 12 15:16 pandaJob.out
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc    975528 Oct 12 15:17 agis_schedconf.cvmfs.json
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc   1560580 Oct 12 15:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:38:16] drwx------. 5 boinc boinc      4096 Oct 12 15:17 pilot3
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc 198882615 Oct 12 16:37 HITS.46676269._070613.pool.root.1
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc        95 Oct 12 16:37 pilot_heartbeat.json
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc      1014 Oct 12 16:37 memory_monitor_summary.json
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc    326083 Oct 12 16:37 log.46676269._070613.job.log.tgz.1
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc      7777 Oct 12 16:37 heartbeat.json
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc       529 Oct 12 16:37 boinc_task_state.xml
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc        27 Oct 12 16:38 wrapper_checkpoint.txt
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:38 boinc_mmap_file
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc      4822 Oct 12 16:38 pilotlog.txt
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc    708426 Oct 12 16:38 log.46676269._070613.job.log.1
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc       357 Oct 12 16:38 output.list
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:38 runtime_log
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc   1054720 Oct 12 16:38 result.tar.gz
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc      8730 Oct 12 16:38 runtime_log.err
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc       650 Oct 12 16:38 aTuLDmWZ2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXYiNDmJkiQ1n.diag
[2025-10-12 16:38:16] -rw-r--r--. 1 boinc boinc     21639 Oct 12 16:38 stderr.txt
[2025-10-12 16:38:16] HITS file was successfully produced:
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc 198882615 Oct 12 16:37 shared/HITS.pool.root.1
[2025-10-12 16:38:16]  *** Contents of shared directory: ***
[2025-10-12 16:38:16] total 412448
[2025-10-12 16:38:16] -rw-r--r--. 2 boinc boinc 221814616 Oct 12 15:16 ATLAS.root_0
[2025-10-12 16:38:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:16 start_atlas.sh
[2025-10-12 16:38:16] -rw-r--r--. 2 boinc boinc    569677 Oct 12 15:16 input.tar.gz
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc 198882615 Oct 12 16:37 HITS.pool.root.1
[2025-10-12 16:38:16] -rw-------. 1 boinc boinc   1054720 Oct 12 16:38 result.tar.gz
16:38:18 (3024695): run_atlas exited; CPU time 36502.851183
16:38:18 (3024695): called boinc_finish(0)

</stderr_txt>
]]>

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