Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:18:33 (3016299): wrapper (7.7.26015): starting
18:18:33 (3016299): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:18:33] Arguments: --nthreads 3
[2025-10-12 18:18:33] Threads: 3
[2025-10-12 18:18:33] Checking for CVMFS
[2025-10-12 18:18:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:18:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:18:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:18:34] 2.9.2.0 1718076 4593 72172 151625 3 57 29189733 36864001 0 130560 0 3387110 99.990 153469 912 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:18:34] CVMFS is ok
[2025-10-12 18:18:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:18:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:18:34] Further information can be found at the LHC@home message board.
[2025-10-12 18:18:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:18:34] Checking for apptainer binary...
[2025-10-12 18:18:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:18:34] Running /usr/bin/apptainer --version
[2025-10-12 18:18:34] apptainer version 1.4.1-1.1
[2025-10-12 18:18:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:18:34] thA333
[2025-10-12 18:18:34] apptainer works
[2025-10-12 18:18:34] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:18:34] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:18:34] Starting ATLAS job with PandaID=6838452633
[2025-10-12 18:18:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:49:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:49:00] 2025-10-12 17:48:12,828 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:12,942 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:13,053 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:13,167 | INFO     | [data] control thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:13,610 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:13,679 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:14,455 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:14,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:49:00] 2025-10-12 17:48:18,479 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:21,423 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:49:00] 2025-10-12 17:48:22,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:49:00] 2025-10-12 17:48:41,179 | INFO     | PID=3020024 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:49:00] 2025-10-12 17:48:41,180 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:49:00] 2025-10-12 17:48:41,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:49:00] 2025-10-12 17:48:41,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:49:00] 2025-10-12 17:48:46,187 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-12 19:49:00] 2025-10-12 17:48:54,719 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:49:00] 2025-10-12 17:48:55,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823726114624)>', '<ExcThread(monitor, started 139822651926272)>']
[2025-10-12 19:49:00] 2025-10-12 17:48:56,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:49:00] 2025-10-12 17:48:56,259 | INFO     | [monitor] control thread has ended
[2025-10-12 19:49:00] 2025-10-12 17:49:00,370 | INFO     | all workflow threads have been joined
[2025-10-12 19:49:00] 2025-10-12 17:49:00,372 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:49:00] 2025-10-12 17:49:00,373 | INFO     | traces error code: 0
[2025-10-12 19:49:00] 2025-10-12 17:49:00,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:49:00] 2025-10-12 17:49:00,421 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:49:00] 2025-10-12 17:49:00,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:49:00] 2025-10-12 17:49:00,427 [wrapper] pilotpid: 3020024
[2025-10-12 19:49:00] 2025-10-12 17:49:00,429 [wrapper] Pilot exit status: 0
[2025-10-12 19:49:00] 2025-10-12 17:49:00,436 [wrapper] pandaids: 6838452633
[2025-10-12 19:49:00] 2025-10-12 17:49:00,452 [wrapper] cleanup supervisor_pilot 3041733 3020025
[2025-10-12 19:49:00] 2025-10-12 17:49:00,455 [wrapper] Test setup, not cleaning
[2025-10-12 19:49:00] 2025-10-12 17:49:00,457 [wrapper] apfmon messages muted
[2025-10-12 19:49:00] 2025-10-12 17:49:00,460 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:49:00] 2025-10-12 17:49:00,462 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:49:00]  *** Error codes and diagnostics ***
[2025-10-12 19:49:00]     "exeErrorCode": 0,
[2025-10-12 19:49:00]     "exeErrorDiag": "",
[2025-10-12 19:49:00]     "pilotErrorCode": 0,
[2025-10-12 19:49:00]     "pilotErrorDiag": "",
[2025-10-12 19:49:00]  *** Listing of results directory ***
[2025-10-12 19:49:00] total 414488
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc    557409 Oct 11 15:40 pilot3.tar.gz
[2025-10-12 19:49:00] -rwx------ 1 boinc boinc     36292 Oct 11 15:48 runpilot2-wrapper.sh
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:48 queuedata.json
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:49:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:18 run_atlas
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:18 job.xml
[2025-10-12 19:49:00] -rw-r--r-- 2 boinc boinc 224137832 Oct 12 18:18 EVNT.46676267._002351.pool.root.1
[2025-10-12 19:49:00] -rw-r--r-- 2 boinc boinc    569679 Oct 12 18:18 input.tar.gz
[2025-10-12 19:49:00] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:18 start_atlas.sh
[2025-10-12 19:49:00] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:18 shared
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:18 boinc_setup_complete
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc      6197 Oct 12 18:18 init_data.xml
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:18 boinc_lockfile
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:18 pandaJob.out
[2025-10-12 19:49:00] -rw------- 1 boinc boinc    975528 Oct 12 18:18 agis_schedconf.cvmfs.json
[2025-10-12 19:49:00] -rw------- 1 boinc boinc   1560580 Oct 12 18:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:49:00] drwx------ 5 boinc boinc      4096 Oct 12 18:18 pilot3
[2025-10-12 19:49:00] -rw------- 1 boinc boinc 194315059 Oct 12 19:47 HITS.46676269._058635.pool.root.1
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:47 boinc_task_state.xml
[2025-10-12 19:49:00] -rw------- 1 boinc boinc      1018 Oct 12 19:47 memory_monitor_summary.json
[2025-10-12 19:49:00] -rw------- 1 boinc boinc    259702 Oct 12 19:47 log.46676269._058635.job.log.tgz.1
[2025-10-12 19:49:00] -rw------- 1 boinc boinc      7753 Oct 12 19:48 heartbeat.json
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:48 wrapper_checkpoint.txt
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:48 boinc_mmap_file
[2025-10-12 19:49:00] -rw------- 1 boinc boinc        95 Oct 12 19:48 pilot_heartbeat.json
[2025-10-12 19:49:00] -rw------- 1 boinc boinc      4824 Oct 12 19:49 pilotlog.txt
[2025-10-12 19:49:00] -rw------- 1 boinc boinc    782857 Oct 12 19:49 log.46676269._058635.job.log.1
[2025-10-12 19:49:00] -rw------- 1 boinc boinc       357 Oct 12 19:49 output.list
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:49 runtime_log
[2025-10-12 19:49:00] -rw------- 1 boinc boinc   1064960 Oct 12 19:49 result.tar.gz
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc      8777 Oct 12 19:49 runtime_log.err
[2025-10-12 19:49:00] -rw------- 1 boinc boinc       658 Oct 12 19:49 O9YMDmz8oR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMYgNDmx4Tkqn.diag
[2025-10-12 19:49:00] -rw-r--r-- 1 boinc boinc      5949 Oct 12 19:49 stderr.txt
[2025-10-12 19:49:00] HITS file was successfully produced:
[2025-10-12 19:49:00] -rw------- 1 boinc boinc 194315059 Oct 12 19:47 shared/HITS.pool.root.1
[2025-10-12 19:49:00]  *** Contents of shared directory: ***
[2025-10-12 19:49:00] total 410276
[2025-10-12 19:49:00] -rw-r--r-- 2 boinc boinc 224137832 Oct 12 18:18 ATLAS.root_0
[2025-10-12 19:49:00] -rw-r--r-- 2 boinc boinc    569679 Oct 12 18:18 input.tar.gz
[2025-10-12 19:49:00] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:18 start_atlas.sh
[2025-10-12 19:49:00] -rw------- 1 boinc boinc 194315059 Oct 12 19:47 HITS.pool.root.1
[2025-10-12 19:49:00] -rw------- 1 boinc boinc   1064960 Oct 12 19:49 result.tar.gz
19:49:02 (3016299): run_atlas exited; CPU time 15376.239813
19:49:02 (3016299): called boinc_finish(0)

</stderr_txt>
]]>

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