Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:26:55 (3978528): wrapper (7.7.26015): starting
10:26:55 (3978528): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 10:26:55] Arguments: --nthreads 4
[2025-10-13 10:26:55] Threads: 4
[2025-10-13 10:26:55] Checking for CVMFS
[2025-10-13 10:26:55] No cvmfs_config command found, will try listing directly
[2025-10-13 10:26:55] CVMFS is ok
[2025-10-13 10:26:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:26:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:26:55] Further information can be found at the LHC@home message board.
[2025-10-13 10:26:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:26:55] Checking for apptainer binary...
[2025-10-13 10:26:55] which: no apptainer in ((null))
[2025-10-13 10:26:55] apptainer is not installed, using version from CVMFS
[2025-10-13 10:26:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:26:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 10:26:56] apptainer works
[2025-10-13 10:26:56] Set ATHENA_PROC_NUMBER=4
[2025-10-13 10:26:56] Set ATHENA_CORE_NUMBER=4
[2025-10-13 10:26:56] Starting ATLAS job with PandaID=6839164706
[2025-10-13 10:26:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:39:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:39:09] 2025-10-13 11:10:33,603 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:39:09] 2025-10-13 11:10:33,624 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2668.465984374999
[2025-10-13 13:39:09] 2025-10-13 11:10:33,648 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6839164706/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,649 | INFO     | extracted standard info from prmon json
[2025-10-13 13:39:09] 2025-10-13 11:10:33,649 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:39:09] 2025-10-13 11:10:33,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:39:09] 2025-10-13 11:10:33,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:39:09] 2025-10-13 11:10:33,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:39:09] 2025-10-13 11:10:33,652 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:39:09] 2025-10-13 11:10:33,653 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,654 | INFO     | sum of deviations: 16588504455.999998
[2025-10-13 13:39:09] 2025-10-13 11:10:33,654 | INFO     | mean x: 1760348913.5
[2025-10-13 13:39:09] 2025-10-13 11:10:33,654 | INFO     | mean y: 2319140.6125
[2025-10-13 13:39:09] 2025-10-13 11:10:33,654 | INFO     | -- intersect: -22990095527.12206
[2025-10-13 13:39:09] 2025-10-13 11:10:33,654 | INFO     | intersect: -22990095527.12206
[2025-10-13 13:39:09] 2025-10-13 11:10:33,654 | INFO     | chi2: 1.327566277980191
[2025-10-13 13:39:09] 2025-10-13 11:10:33,655 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,655 | INFO     | sum of deviations: 16027002811.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,655 | INFO     | mean x: 1760348761.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | mean y: 2318397.8387096776
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | -- intersect: -24431739054.00487
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | intersect: -24431739054.00487
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | chi2: 1.328790749018454
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | current chi2=1.328790749018454 (change=-0.09223426796635202 %)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | right removable region: 154
[2025-10-13 13:39:09] 2025-10-13 11:10:33,656 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,657 | INFO     | sum of deviations: -3274828676.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,657 | INFO     | mean x: 1760349066.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,657 | INFO     | mean y: 2344947.3096774193
[2025-10-13 13:39:09] 2025-10-13 11:10:33,657 | INFO     | -- intersect: 4995004324.851293
[2025-10-13 13:39:09] 2025-10-13 11:10:33,657 | INFO     | intersect: 4995004324.851293
[2025-10-13 13:39:09] 2025-10-13 11:10:33,658 | INFO     | chi2: 0.005850297921563116
[2025-10-13 13:39:09] 2025-10-13 11:10:33,658 | INFO     | current chi2=0.005850297921563116 (change=99.55932159330952 %)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,658 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | sum of deviations: -3427506552.0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | mean x: 1760349218.5
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | mean y: 2345158.066666667
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | -- intersect: 5767941409.982218
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | intersect: 5767941409.982218
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | chi2: 0.0054050893876867
[2025-10-13 13:39:09] 2025-10-13 11:10:33,659 | INFO     | current chi2=0.0054050893876867 (change=7.61001473506947 %)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,660 | INFO     | left removable region: 20
[2025-10-13 13:39:09] 2025-10-13 11:10:33,660 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 13:39:09] 2025-10-13 11:10:33,660 | INFO     | sum of deviations: -2342934176.9999995
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | mean x: 1760349340.5
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | mean y: 2343542.343283582
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | -- intersect: 5530627187.135449
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | intersect: 5530627187.135449
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | chi2: 0.004962968342474267
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | -- intersect: 5530627187.135449
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | current memory leak: -3.14 B/s (using 134 data points, chi2=0.00)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,661 | INFO     | could have reported an average CPU frequency of 2695 MHz (9 samples)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | ..............................
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . Timing measurements:
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . get job = 0 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . initial setup = 1 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . payload setup = 8 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . stage-in = 0 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . payload execution = 9761 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . stage-out = 0 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | . log creation = 0 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,662 | INFO     | ..............................
[2025-10-13 13:39:09] 2025-10-13 11:10:33,757 | INFO     | 
[2025-10-13 13:39:09] 2025-10-13 11:10:33,757 | INFO     | job summary report
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | --------------------------------------------------
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | PanDA job id: 6839164706
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | task id: 46676269
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | errors: (none)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | pilot state: finished 
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | transexitcode: 0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | exeerrorcode: 0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | exeerrordiag: 
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | exitcode: 0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,758 | INFO     | exitmsg: OK
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | cpuconsumptiontime: 37403 s
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | nevents: 400
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | neventsw: 0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | pid: 3989913
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | pgrp: 3989913
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | corecount: 4
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | event service: False
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | sizes: {0: 2348869, 1: 2348869, 7: 2349159, 11: 2349187, 9773: 2378184, 9774: 2378183, 9776: 2387389, 9777: 2387445, 9785: 2387703}
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | --------------------------------------------------
[2025-10-13 13:39:09] 2025-10-13 11:10:33,759 | INFO     | 
[2025-10-13 13:39:09] 2025-10-13 11:10:33,760 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-13 13:39:09] 2025-10-13 11:10:33,775 | INFO     | time since job start (9803s) is within the limit (172800.0s)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | job 6839164706 has completed (purged errors)
[2025-10-13 13:39:09] 2025-10-13 11:10:33,793 | INFO     | overall cleanup function is called
[2025-10-13 13:39:09] 2025-10-13 11:10:34,803 | INFO     | --- collectZombieJob: --- 10, [3989913]
[2025-10-13 13:39:09] 2025-10-13 11:10:34,803 | INFO     | zombie collector waiting for pid 3989913
[2025-10-13 13:39:09] 2025-10-13 11:10:34,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:39:09] 2025-10-13 11:10:34,803 | INFO     | collected zombie processes
[2025-10-13 13:39:09] 2025-10-13 11:10:34,803 | INFO     | will attempt to kill all subprocesses of pid=3989913
[2025-10-13 13:39:09] 2025-10-13 11:10:35,613 | INFO     | process IDs to be killed: [3989913] (in reverse order)
[2025-10-13 13:39:09] 2025-10-13 11:10:35,871 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:39:09] 2025-10-13 11:10:35,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:39:09] 2025-10-13 11:10:35,904 | INFO     | did not find any defunct processes belonging to 3989913
[2025-10-13 13:39:09] 2025-10-13 11:10:35,936 | INFO     | did not find any defunct processes belonging to 3989913
[2025-10-13 13:39:09] 2025-10-13 11:10:35,936 | INFO     | ready for new job
[2025-10-13 13:39:09] 2025-10-13 11:10:35,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:39:09] 2025-10-13 11:10:35,939 | INFO     | ***************************************
[2025-10-13 13:39:09] 2025-10-13 11:10:35,939 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:39:09] 2025-10-13 11:10:35,939 | INFO     | ***************************************
[2025-10-13 13:39:09] 2025-10-13 11:10:35,939 | INFO     | 
[2025-10-13 13:39:09] 2025-10-13 11:10:35,948 | INFO     | architecture information:
[2025-10-13 13:39:09] 2025-10-13 11:10:35,948 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:39:09] 2025-10-13 11:10:35,970 | INFO     | cat /etc/os-release:
[2025-10-13 13:39:09] NAME="CentOS Linux"
[2025-10-13 13:39:09] VERSION="7 (Core)"
[2025-10-13 13:39:09] ID="centos"
[2025-10-13 13:39:09] ID_LIKE="rhel fedora"
[2025-10-13 13:39:09] VERSION_ID="7"
[2025-10-13 13:39:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:39:09] ANSI_COLOR="0;31"
[2025-10-13 13:39:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:39:09] HOME_URL="https://www.centos.org/"
[2025-10-13 13:39:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:39:09] 
[2025-10-13 13:39:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:39:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:39:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:39:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:39:09] 
[2025-10-13 13:39:09] 2025-10-13 11:10:35,971 | INFO     | ***************************************
[2025-10-13 13:39:09] 2025-10-13 11:10:36,473 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-13 13:39:09] 2025-10-13 11:10:36,496 | INFO     | sufficient remaining disk space (3335741505536 B)
[2025-10-13 13:39:09] 2025-10-13 11:10:36,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:39:09] 2025-10-13 11:10:36,497 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:39:09] 2025-10-13 11:10:36,497 | INFO     | update_server=False
[2025-10-13 13:39:09] 2025-10-13 11:10:36,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:39:09] 2025-10-13 11:10:36,508 | INFO     | all data control threads have been joined
[2025-10-13 13:39:09] 2025-10-13 11:10:36,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:39:09] 2025-10-13 11:10:36,759 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:39:09] 2025-10-13 11:10:36,760 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:39:09] 2025-10-13 11:10:36,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:39:09] 2025-10-13 11:10:36,760 | INFO     | will abort loop
[2025-10-13 13:39:09] 2025-10-13 11:10:37,315 | INFO     | all job control threads have been joined
[2025-10-13 13:39:09] 2025-10-13 11:10:37,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:39:09] 2025-10-13 11:10:37,500 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:37,512 | INFO     | [data] control thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:37,533 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:37,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:37,765 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:37,782 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:37,927 | INFO     | all payload control threads have been joined
[2025-10-13 13:39:09] 2025-10-13 11:10:38,071 | INFO     | [job] validate thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:38,146 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:38,280 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:38,320 | INFO     | [job] control thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:38,340 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:38,605 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:38,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:39:09] 2025-10-13 11:10:38,932 | INFO     | [payload] control thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:39,382 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:39,773 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:10:40,664 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:39:09] 2025-10-13 11:11:07,822 | INFO     | PID=3982547 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:39:09] 2025-10-13 11:11:07,822 | INFO     | .. there are 10 such processes running
[2025-10-13 13:39:09] 2025-10-13 11:11:07,823 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:39:09] 2025-10-13 11:11:07,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:39:09] 2025-10-13 11:11:07,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:39:09] 2025-10-13 11:11:26,034 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:39:09] 2025-10-13 11:11:27,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23237763647296)>', '<ExcThread(monitor, started 23237522056960)>']
[2025-10-13 13:39:09] 2025-10-13 11:11:27,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:39:09] 2025-10-13 11:11:27,924 | INFO     | [monitor] control thread has ended
[2025-10-13 13:39:09] 2025-10-13 11:11:32,933 | INFO     | all workflow threads have been joined
[2025-10-13 13:39:09] 2025-10-13 11:11:32,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:39:09] 2025-10-13 11:11:32,933 | INFO     | traces error code: 0
[2025-10-13 13:39:09] 2025-10-13 11:11:32,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:39:09] 2025-10-13 11:11:33,159 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:39:09] 2025-10-13 11:11:33,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:39:09] 2025-10-13 11:11:33,167 [wrapper] pilotpid: 3982547
[2025-10-13 13:39:09] 2025-10-13 11:11:33,175 [wrapper] Pilot exit status: 0
[2025-10-13 13:39:09] 2025-10-13 11:11:33,193 [wrapper] pandaids: 6839164706
[2025-10-13 13:39:09] 2025-10-13 11:11:33,380 [wrapper] cleanup supervisor_pilot  168978 3982548
[2025-10-13 13:39:09] 2025-10-13 11:11:33,384 [wrapper] Test setup, not cleaning
[2025-10-13 13:39:09] 2025-10-13 11:11:33,388 [wrapper] apfmon messages muted
[2025-10-13 13:39:09] 2025-10-13 11:11:33,393 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:39:09] 2025-10-13 11:11:33,397 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:39:09]  *** Error codes and diagnostics ***
[2025-10-13 13:39:09]     "exeErrorCode": 0,
[2025-10-13 13:39:09]     "exeErrorDiag": "",
[2025-10-13 13:39:09]     "pilotErrorCode": 0,
[2025-10-13 13:39:09]     "pilotErrorDiag": "",
[2025-10-13 13:39:09]  *** Listing of results directory ***
[2025-10-13 13:39:09] total 418424
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:02 pilot3.tar.gz
[2025-10-13 13:39:09] -rwx------ 1 boinc boinc     36292 Oct 12 03:17 runpilot2-wrapper.sh
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:17 queuedata.json
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:39:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:26 run_atlas
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:26 job.xml
[2025-10-13 13:39:09] -rw-r--r-- 2 boinc boinc 219061274 Oct 13 10:26 EVNT.46676267._003124.pool.root.1
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc      6687 Oct 13 10:26 init_data.xml
[2025-10-13 13:39:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:26 start_atlas.sh
[2025-10-13 13:39:09] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:26 shared
[2025-10-13 13:39:09] -rw-r--r-- 2 boinc boinc    569680 Oct 13 10:26 input.tar.gz
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:26 boinc_lockfile
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:26 pandaJob.out
[2025-10-13 13:39:09] -rw------- 1 boinc boinc    972857 Oct 13 10:27 agis_schedconf.cvmfs.json
[2025-10-13 13:39:09] -rw------- 1 boinc boinc   1560580 Oct 13 10:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:39:09] drwx------ 5 boinc boinc      4096 Oct 13 10:27 pilot3
[2025-10-13 13:39:09] -rw------- 1 boinc boinc 202057090 Oct 13 13:09 HITS.46676269._068197.pool.root.1
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc       528 Oct 13 13:09 boinc_task_state.xml
[2025-10-13 13:39:09] -rw------- 1 boinc boinc      1028 Oct 13 13:10 memory_monitor_summary.json
[2025-10-13 13:39:09] -rw------- 1 boinc boinc    351616 Oct 13 13:10 log.46676269._068197.job.log.tgz.1
[2025-10-13 13:39:09] -rw------- 1 boinc boinc      7784 Oct 13 13:10 heartbeat.json
[2025-10-13 13:39:09] -rw------- 1 boinc boinc        95 Oct 13 13:11 pilot_heartbeat.json
[2025-10-13 13:39:09] -rw------- 1 boinc boinc      5022 Oct 13 13:11 pilotlog.txt
[2025-10-13 13:39:09] -rw------- 1 boinc boinc   1375095 Oct 13 13:11 log.46676269._068197.job.log.1
[2025-10-13 13:39:09] -rw------- 1 boinc boinc       357 Oct 13 13:11 output.list
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:11 runtime_log
[2025-10-13 13:39:09] -rw------- 1 boinc boinc   1740800 Oct 13 13:11 result.tar.gz
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc      9084 Oct 13 13:11 runtime_log.err
[2025-10-13 13:39:09] -rw------- 1 boinc boinc       662 Oct 13 13:11 hYdKDm8szR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm59hNDm5m8XUm.diag
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc        26 Oct 13 13:38 wrapper_checkpoint.txt
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:39 boinc_mmap_file
[2025-10-13 13:39:09] -rw-r--r-- 1 boinc boinc     20900 Oct 13 13:39 stderr.txt
[2025-10-13 13:39:09] HITS file was successfully produced:
[2025-10-13 13:39:09] -rw------- 1 boinc boinc 202057090 Oct 13 13:09 shared/HITS.pool.root.1
[2025-10-13 13:39:09]  *** Contents of shared directory: ***
[2025-10-13 13:39:09] total 413536
[2025-10-13 13:39:09] -rw-r--r-- 2 boinc boinc 219061274 Oct 13 10:26 ATLAS.root_0
[2025-10-13 13:39:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:26 start_atlas.sh
[2025-10-13 13:39:09] -rw-r--r-- 2 boinc boinc    569680 Oct 13 10:26 input.tar.gz
[2025-10-13 13:39:09] -rw------- 1 boinc boinc 202057090 Oct 13 13:09 HITS.pool.root.1
[2025-10-13 13:39:09] -rw------- 1 boinc boinc   1740800 Oct 13 13:11 result.tar.gz
13:39:10 (3978528): run_atlas exited; CPU time 38025.119422
13:39:10 (3978528): called boinc_finish(0)

</stderr_txt>
]]>

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