Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:11:40 (2192422): wrapper (7.7.26015): starting
17:11:40 (2192422): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 17:11:40] Arguments: --nthreads 2
[2025-10-12 17:11:40] Threads: 2
[2025-10-12 17:11:40] Checking for CVMFS
[2025-10-12 17:11:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:11:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:11:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:11:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:11:41] 2.9.2.0 1188606 4377 61824 151624 2 16 34472338 36864001 0 130560 0 2638803 99.988 151808 738 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 17:11:41] CVMFS is ok
[2025-10-12 17:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:11:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:11:41] Further information can be found at the LHC@home message board.
[2025-10-12 17:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:11:41] Checking for apptainer binary...
[2025-10-12 17:11:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:11:41] Running /usr/bin/apptainer --version
[2025-10-12 17:11:41] apptainer version 1.4.1-1.1
[2025-10-12 17:11:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:11:41] magicA244
[2025-10-12 17:11:41] apptainer works
[2025-10-12 17:11:41] Set ATHENA_PROC_NUMBER=2
[2025-10-12 17:11:41] Set ATHENA_CORE_NUMBER=2
[2025-10-12 17:11:41] Starting ATLAS job with PandaID=6838632959
[2025-10-12 17:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:17:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:17:09] 2025-10-12 17:16:22,808 | INFO     | all data control threads have been joined
[2025-10-12 19:17:09] 2025-10-12 17:16:22,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:17:09] 2025-10-12 17:16:23,354 | INFO     | all job control threads have been joined
[2025-10-12 19:17:09] 2025-10-12 17:16:23,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:17:09] 2025-10-12 17:16:23,546 | INFO     | aborting loop
[2025-10-12 19:17:09] 2025-10-12 17:16:23,763 | INFO     | all payload control threads have been joined
[2025-10-12 19:17:09] 2025-10-12 17:16:23,803 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:23,804 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:23,814 | INFO     | [data] control thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:23,884 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:23,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:17:09] 2025-10-12 17:16:24,360 | INFO     | [job] control thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:24,482 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:24,552 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:24,615 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:24,732 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:24,769 | INFO     | [payload] control thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:25,152 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:25,240 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:25,281 | INFO     | [job] validate thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:25,973 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:27,005 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:33,232 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:17:09] 2025-10-12 17:16:34,238 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:17:09] 2025-10-12 17:16:53,889 | INFO     | PID=2196146 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:17:09] 2025-10-12 17:16:53,889 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:17:09] 2025-10-12 17:16:53,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:17:09] 2025-10-12 17:16:53,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:17:09] 2025-10-12 17:17:03,524 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:17:09] 2025-10-12 17:17:04,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170577528640)>', '<ExcThread(monitor, started 140169948690176)>']
[2025-10-12 19:17:09] 2025-10-12 17:17:04,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:17:09] 2025-10-12 17:17:04,945 | INFO     | [monitor] control thread has ended
[2025-10-12 19:17:09] 2025-10-12 17:17:09,861 | INFO     | all workflow threads have been joined
[2025-10-12 19:17:09] 2025-10-12 17:17:09,861 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:17:09] 2025-10-12 17:17:09,862 | INFO     | traces error code: 0
[2025-10-12 19:17:09] 2025-10-12 17:17:09,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:17:09] 2025-10-12 17:17:09,905 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:17:09] 2025-10-12 17:17:09,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:17:09] 2025-10-12 17:17:09,910 [wrapper] pilotpid: 2196146
[2025-10-12 19:17:09] 2025-10-12 17:17:09,912 [wrapper] Pilot exit status: 0
[2025-10-12 19:17:09] 2025-10-12 17:17:09,918 [wrapper] pandaids: 6838632959
[2025-10-12 19:17:09] 2025-10-12 17:17:09,931 [wrapper] cleanup supervisor_pilot 2217073 2196147
[2025-10-12 19:17:09] 2025-10-12 17:17:09,933 [wrapper] Test setup, not cleaning
[2025-10-12 19:17:09] 2025-10-12 17:17:09,935 [wrapper] apfmon messages muted
[2025-10-12 19:17:09] 2025-10-12 17:17:09,937 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:17:09] 2025-10-12 17:17:09,939 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:17:09]  *** Error codes and diagnostics ***
[2025-10-12 19:17:09]     "exeErrorCode": 0,
[2025-10-12 19:17:09]     "exeErrorDiag": "",
[2025-10-12 19:17:09]     "pilotErrorCode": 0,
[2025-10-12 19:17:09]     "pilotErrorDiag": "",
[2025-10-12 19:17:09]  *** Listing of results directory ***
[2025-10-12 19:17:09] total 411416
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:20 pilot3.tar.gz
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:33 queuedata.json
[2025-10-12 19:17:09] -rwx------ 1 boinc boinc     36292 Oct 11 18:36 runpilot2-wrapper.sh
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc       100 Oct 12 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:17:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 17:11 run_atlas
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc       105 Oct 12 17:11 job.xml
[2025-10-12 19:17:09] -rw-r--r-- 2 boinc boinc 219382531 Oct 12 17:11 EVNT.46676267._002456.pool.root.1
[2025-10-12 19:17:09] -rw-r--r-- 2 boinc boinc    569679 Oct 12 17:11 input.tar.gz
[2025-10-12 19:17:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:11 start_atlas.sh
[2025-10-12 19:17:09] drwxrwx--x 2 boinc boinc      4096 Oct 12 17:11 shared
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:11 boinc_setup_complete
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc      6209 Oct 12 17:11 init_data.xml
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:11 boinc_lockfile
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc      2550 Oct 12 17:11 pandaJob.out
[2025-10-12 19:17:09] -rw------- 1 boinc boinc    975528 Oct 12 17:11 agis_schedconf.cvmfs.json
[2025-10-12 19:17:09] -rw------- 1 boinc boinc   1560580 Oct 12 17:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:17:09] drwx------ 5 boinc boinc      4096 Oct 12 17:11 pilot3
[2025-10-12 19:17:09] -rw------- 1 boinc boinc 195291624 Oct 12 19:15 HITS.46676269._061168.pool.root.1
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:15 boinc_task_state.xml
[2025-10-12 19:17:09] -rw------- 1 boinc boinc      1016 Oct 12 19:16 memory_monitor_summary.json
[2025-10-12 19:17:09] -rw------- 1 boinc boinc    286518 Oct 12 19:16 log.46676269._061168.job.log.tgz.1
[2025-10-12 19:17:09] -rw------- 1 boinc boinc      7762 Oct 12 19:16 heartbeat.json
[2025-10-12 19:17:09] -rw------- 1 boinc boinc        95 Oct 12 19:16 pilot_heartbeat.json
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:16 boinc_mmap_file
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:16 wrapper_checkpoint.txt
[2025-10-12 19:17:09] -rw------- 1 boinc boinc      4824 Oct 12 19:17 pilotlog.txt
[2025-10-12 19:17:09] -rw------- 1 boinc boinc   1076581 Oct 12 19:17 log.46676269._061168.job.log.1
[2025-10-12 19:17:09] -rw------- 1 boinc boinc       357 Oct 12 19:17 output.list
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:17 runtime_log
[2025-10-12 19:17:09] -rw------- 1 boinc boinc   1382400 Oct 12 19:17 result.tar.gz
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc      8792 Oct 12 19:17 runtime_log.err
[2025-10-12 19:17:09] -rw------- 1 boinc boinc       662 Oct 12 19:17 kMKLDmKlrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaygNDmvS2Adn.diag
[2025-10-12 19:17:09] -rw-r--r-- 1 boinc boinc      7162 Oct 12 19:17 stderr.txt
[2025-10-12 19:17:09] HITS file was successfully produced:
[2025-10-12 19:17:09] -rw------- 1 boinc boinc 195291624 Oct 12 19:15 shared/HITS.pool.root.1
[2025-10-12 19:17:09]  *** Contents of shared directory: ***
[2025-10-12 19:17:09] total 406896
[2025-10-12 19:17:09] -rw-r--r-- 2 boinc boinc 219382531 Oct 12 17:11 ATLAS.root_0
[2025-10-12 19:17:09] -rw-r--r-- 2 boinc boinc    569679 Oct 12 17:11 input.tar.gz
[2025-10-12 19:17:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:11 start_atlas.sh
[2025-10-12 19:17:09] -rw------- 1 boinc boinc 195291624 Oct 12 19:15 HITS.pool.root.1
[2025-10-12 19:17:09] -rw------- 1 boinc boinc   1382400 Oct 12 19:17 result.tar.gz
19:17:11 (2192422): run_atlas exited; CPU time 14520.598223
19:17:11 (2192422): called boinc_finish(0)

</stderr_txt>
]]>

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