Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:11:48 (510367): wrapper (7.7.26015): starting
22:11:48 (510367): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 22:11:48] Arguments: --nthreads 6
[2025-10-12 22:11:48] Threads: 6
[2025-10-12 22:11:48] Checking for CVMFS
[2025-10-12 22:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:11:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:11:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:11:50] 2.13.2.0 510567 0 30728 151635 3 1 16329090 81920001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-10-12 22:11:50] CVMFS is ok
[2025-10-12 22:11:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:11:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:11:50] Further information can be found at the LHC@home message board.
[2025-10-12 22:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:11:50] Checking for apptainer binary...
[2025-10-12 22:11:50] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-10-12 22:11:50] apptainer is not installed, using version from CVMFS
[2025-10-12 22:11:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:11:50] monitor-atlas.iep
[2025-10-12 22:11:50] apptainer works
[2025-10-12 22:11:50] Set ATHENA_PROC_NUMBER=6
[2025-10-12 22:11:50] Set ATHENA_CORE_NUMBER=6
[2025-10-12 22:11:50] Starting ATLAS job with PandaID=6837331836
[2025-10-12 22:11:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:02:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:02:08]  replicas=None
[2025-10-12 23:02:08]  scope=mc23_13p6TeV
[2025-10-12 23:02:08]  status=None
[2025-10-12 23:02:08]  status_code=0
[2025-10-12 23:02:08]  storage_token=
[2025-10-12 23:02:08]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6837331836/log.46676269._015130.job.log.tgz.1
[2025-10-12 23:02:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/5e/log.46676269._015130.job.log.tgz.1
[2025-10-12 23:02:08]  workdir=None
[2025-10-12 23:02:08] ]
[2025-10-12 23:02:08] 2025-10-12 21:00:56,751 | INFO     | transferring file log.46676269._015130.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6837331836/log.46676269._015130.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 23:02:08] 2025-10-12 21:00:56,751 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6837331836/log.46676269._015130.job.log.tgz.1 /var/lib/boinc/slots/6/log.46676269._015130.job
[2025-10-12 23:02:08] 2025-10-12 21:00:56,758 | INFO     | adding to output.list: log.46676269._015130.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/5e/log.46676269._015130.job.log.tg
[2025-10-12 23:02:08] 2025-10-12 21:00:56,759 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:02:08] 2025-10-12 21:00:56,759 | INFO     | summary of transferred files:
[2025-10-12 23:02:08] 2025-10-12 21:00:56,759 | INFO     |  -- lfn=log.46676269._015130.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:02:08] 2025-10-12 21:00:56,759 | INFO     | stage-out finished correctly
[2025-10-12 23:02:08] 2025-10-12 21:00:57,303 | INFO     | PID=514570 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:02:08] 2025-10-12 21:00:58,303 | INFO     | time since job start (2940s) is within the limit (172800.0s)
[2025-10-12 23:02:08] 2025-10-12 21:00:59,931 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:02:08] 2025-10-12 21:01:00,009 | INFO     | job 6837331836 has state=finished
[2025-10-12 23:02:08] 2025-10-12 21:01:00,009 | INFO     | preparing for final server update for job 6837331836 in state='finished'
[2025-10-12 23:02:08] 2025-10-12 21:01:00,009 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:02:08] 2025-10-12 21:01:00,009 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:02:08] 2025-10-12 21:01:00,010 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:02:08] 2025-10-12 21:01:00,010 | INFO     | job 6837331836 has finished - writing final server update
[2025-10-12 23:02:08] 2025-10-12 21:01:00,010 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:02:08] 2025-10-12 21:01:00,010 | INFO     | executing command: lscpu
[2025-10-12 23:02:08] 2025-10-12 21:01:00,017 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:02:08] 2025-10-12 21:01:00,309 | INFO     | time since job start (2942s) is within the limit (172800.0s)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,109 | WARNING  | process 521124 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:02:08] 2025-10-12 21:01:02,109 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6837331836/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,143 | INFO     | number of running child processes to parent process 521124: 1
[2025-10-12 23:02:08] 2025-10-12 21:01:02,143 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:02:08] 2025-10-12 21:01:02,313 | INFO     | time since job start (2944s) is within the limit (172800.0s)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,829 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:02:08] 2025-10-12 21:01:02,830 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4300.669833333333
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6837331836/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | INFO     | extracted standard info from prmon json
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:02:08] 2025-10-12 21:01:02,831 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | sum of square deviations: 21358540.0
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | sum of deviations: 334266763.00000006
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | mean x: 1760301459.0
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | mean y: 2486243.2682926827
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | -- intersect: -27546694112.88467
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | intersect: -27546694112.88467
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | chi2: 0.0003794867225428852
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | -- intersect: -27546694112.88467
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | current memory leak: 15.65 B/s (using 41 data points, chi2=0.00)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | could have reported an average CPU frequency of 4299 MHz (5 samples)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | ..............................
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . Timing measurements:
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . get job = 0 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . initial setup = 1 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . payload setup = 2 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . stage-in = 0 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . payload execution = 2920 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . stage-out = 0 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | . log creation = 0 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,832 | INFO     | ..............................
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | 
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | job summary report
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | --------------------------------------------------
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | PanDA job id: 6837331836
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | task id: 46676269
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | errors: (none)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | pilot state: finished 
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | transexitcode: 0
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | exeerrorcode: 0
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | exeerrordiag: 
[2025-10-12 23:02:08] 2025-10-12 21:01:02,863 | INFO     | exitcode: 0
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | exitmsg: OK
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | cpuconsumptiontime: 16654 s
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | nevents: 400
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | neventsw: 0
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | pid: 521124
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | pgrp: 521124
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | corecount: 6
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | event service: False
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | sizes: {0: 2348853, 2: 2349115, 11: 2349143, 2926: 2383568, 2929: 2383568, 2932: 2383794}
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | --------------------------------------------------
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | 
[2025-10-12 23:02:08] 2025-10-12 21:01:02,864 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-12 23:02:08] 2025-10-12 21:01:02,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | job 6837331836 has completed (purged errors)
[2025-10-12 23:02:08] 2025-10-12 21:01:02,873 | INFO     | overall cleanup function is called
[2025-10-12 23:02:08] 2025-10-12 21:01:03,879 | INFO     | --- collectZombieJob: --- 10, [521124]
[2025-10-12 23:02:08] 2025-10-12 21:01:03,879 | INFO     | zombie collector waiting for pid 521124
[2025-10-12 23:02:08] 2025-10-12 21:01:03,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:02:08] 2025-10-12 21:01:03,879 | INFO     | collected zombie processes
[2025-10-12 23:02:08] 2025-10-12 21:01:03,879 | INFO     | will attempt to kill all subprocesses of pid=521124
[2025-10-12 23:02:08] 2025-10-12 21:01:03,912 | INFO     | process IDs to be killed: [521124] (in reverse order)
[2025-10-12 23:02:08] 2025-10-12 21:01:03,929 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:02:08] 2025-10-12 21:01:03,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:02:08] 2025-10-12 21:01:03,930 | INFO     | did not find any defunct processes belonging to 521124
[2025-10-12 23:02:08] 2025-10-12 21:01:03,931 | INFO     | did not find any defunct processes belonging to 521124
[2025-10-12 23:02:08] 2025-10-12 21:01:03,931 | INFO     | ready for new job
[2025-10-12 23:02:08] 2025-10-12 21:01:03,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:02:08] 2025-10-12 21:01:03,932 | INFO     | ***************************************
[2025-10-12 23:02:08] 2025-10-12 21:01:03,932 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:02:08] 2025-10-12 21:01:03,932 | INFO     | ***************************************
[2025-10-12 23:02:08] 2025-10-12 21:01:03,932 | INFO     | 
[2025-10-12 23:02:08] 2025-10-12 21:01:03,932 | INFO     | architecture information:
[2025-10-12 23:02:08] 2025-10-12 21:01:03,932 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:02:08] 2025-10-12 21:01:03,938 | INFO     | cat /etc/os-release:
[2025-10-12 23:02:08] NAME="CentOS Linux"
[2025-10-12 23:02:08] VERSION="7 (Core)"
[2025-10-12 23:02:08] ID="centos"
[2025-10-12 23:02:08] ID_LIKE="rhel fedora"
[2025-10-12 23:02:08] VERSION_ID="7"
[2025-10-12 23:02:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:02:08] ANSI_COLOR="0;31"
[2025-10-12 23:02:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:02:08] HOME_URL="https://www.centos.org/"
[2025-10-12 23:02:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:02:08] 
[2025-10-12 23:02:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:02:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:02:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:02:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:02:08] 
[2025-10-12 23:02:08] 2025-10-12 21:01:03,938 | INFO     | ***************************************
[2025-10-12 23:02:08] 2025-10-12 21:01:04,441 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-12 23:02:08] 2025-10-12 21:01:04,447 | INFO     | sufficient remaining disk space (871239778304 B)
[2025-10-12 23:02:08] 2025-10-12 21:01:04,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:02:08] 2025-10-12 21:01:04,447 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:02:08] 2025-10-12 21:01:04,447 | INFO     | update_server=False
[2025-10-12 23:02:08] 2025-10-12 21:01:04,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:02:08] 2025-10-12 21:01:04,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:02:08] 2025-10-12 21:01:04,514 | INFO     | all payload control threads have been joined
[2025-10-12 23:02:08] 2025-10-12 21:01:04,646 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 23:02:08] 2025-10-12 21:01:04,646 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 23:02:08] 2025-10-12 21:01:04,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:02:08] 2025-10-12 21:01:04,646 | INFO     | will abort loop
[2025-10-12 23:02:08] 2025-10-12 21:01:04,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:02:08] 2025-10-12 21:01:05,341 | INFO     | all data control threads have been joined
[2025-10-12 23:02:08] 2025-10-12 21:01:05,448 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:05,452 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:05,488 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:05,519 | INFO     | [payload] control thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:05,652 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:05,678 | INFO     | all job control threads have been joined
[2025-10-12 23:02:08] 2025-10-12 21:01:05,770 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:05,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:02:08] 2025-10-12 21:01:06,197 | INFO     | [job] validate thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,248 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,346 | INFO     | [data] control thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,375 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,453 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,465 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,679 | INFO     | [job] control thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:06,803 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:09,965 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:14,818 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:02:08] 2025-10-12 21:01:15,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:02:08] 2025-10-12 21:01:35,446 | INFO     | PID=514570 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:02:08] 2025-10-12 21:01:35,447 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:02:08] 2025-10-12 21:01:35,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:02:08] 2025-10-12 21:01:35,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:02:08] 2025-10-12 21:02:02,337 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:02:08] 2025-10-12 21:02:03,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675447736128)>', '<ExcThread(monitor, started 139674685273856)>']
[2025-10-12 23:02:08] 2025-10-12 21:02:03,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:02:08] 2025-10-12 21:02:03,589 | INFO     | [monitor] control thread has ended
[2025-10-12 23:02:08] 2025-10-12 21:02:08,336 | INFO     | all workflow threads have been joined
[2025-10-12 23:02:08] 2025-10-12 21:02:08,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:02:08] 2025-10-12 21:02:08,336 | INFO     | traces error code: 0
[2025-10-12 23:02:08] 2025-10-12 21:02:08,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:02:08] 2025-10-12 21:02:08,380 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:02:08] 2025-10-12 21:02:08,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:02:08] 2025-10-12 21:02:08,383 [wrapper] pilotpid: 514570
[2025-10-12 23:02:08] 2025-10-12 21:02:08,384 [wrapper] Pilot exit status: 0
[2025-10-12 23:02:08] 2025-10-12 21:02:08,387 [wrapper] pandaids: 6837331836
[2025-10-12 23:02:08] 2025-10-12 21:02:08,396 [wrapper] cleanup supervisor_pilot  537680 514571
[2025-10-12 23:02:08] 2025-10-12 21:02:08,397 [wrapper] Test setup, not cleaning
[2025-10-12 23:02:08] 2025-10-12 21:02:08,398 [wrapper] apfmon messages muted
[2025-10-12 23:02:08] 2025-10-12 21:02:08,399 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:02:08] 2025-10-12 21:02:08,400 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:02:08]  *** Error codes and diagnostics ***
[2025-10-12 23:02:08]     "exeErrorCode": 0,
[2025-10-12 23:02:08]     "exeErrorDiag": "",
[2025-10-12 23:02:08]     "pilotErrorCode": 0,
[2025-10-12 23:02:08]     "pilotErrorDiag": "",
[2025-10-12 23:02:08]  *** Listing of results directory ***
[2025-10-12 23:02:08] total 416524
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc      5112 Oct  9 12:51 queuedata.json
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc    557409 Oct  9 12:52 pilot3.tar.gz
[2025-10-12 23:02:08] -rwx------ 1 boinc boinc     36292 Oct  9 13:01 runpilot2-wrapper.sh
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:02:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:11 run_atlas
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:11 job.xml
[2025-10-12 23:02:08] -rw-r--r-- 2 boinc boinc 223857972 Oct 12 22:11 EVNT.46676267._000622.pool.root.1
[2025-10-12 23:02:08] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:11 start_atlas.sh
[2025-10-12 23:02:08] drwxrwx--x 2 boinc boinc        68 Oct 12 22:11 shared
[2025-10-12 23:02:08] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:11 input.tar.gz
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc      6549 Oct 12 22:11 init_data.xml
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:11 boinc_lockfile
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc      2548 Oct 12 22:11 pandaJob.out
[2025-10-12 23:02:08] -rw------- 1 boinc boinc    975536 Oct 12 22:11 agis_schedconf.cvmfs.json
[2025-10-12 23:02:08] -rw------- 1 boinc boinc   1560580 Oct 12 22:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:02:08] drwx------ 5 boinc boinc      4096 Oct 12 22:11 pilot3
[2025-10-12 23:02:08] -rw------- 1 boinc boinc 197357307 Oct 12 23:00 HITS.46676269._015130.pool.root.1
[2025-10-12 23:02:08] -rw------- 1 boinc boinc      1020 Oct 12 23:00 memory_monitor_summary.json
[2025-10-12 23:02:08] -rw------- 1 boinc boinc    257102 Oct 12 23:00 log.46676269._015130.job.log.tgz.1
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc       529 Oct 12 23:01 boinc_task_state.xml
[2025-10-12 23:02:08] -rw------- 1 boinc boinc      7779 Oct 12 23:01 heartbeat.json
[2025-10-12 23:02:08] -rw------- 1 boinc boinc        95 Oct 12 23:01 pilot_heartbeat.json
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc        27 Oct 12 23:02 wrapper_checkpoint.txt
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:02 boinc_mmap_file
[2025-10-12 23:02:08] -rw------- 1 boinc boinc      5006 Oct 12 23:02 pilotlog.txt
[2025-10-12 23:02:08] -rw------- 1 boinc boinc    452587 Oct 12 23:02 log.46676269._015130.job.log.1
[2025-10-12 23:02:08] -rw------- 1 boinc boinc       357 Oct 12 23:02 output.list
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:02 runtime_log
[2025-10-12 23:02:08] -rw------- 1 boinc boinc    727040 Oct 12 23:02 result.tar.gz
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc      8716 Oct 12 23:02 runtime_log.err
[2025-10-12 23:02:08] -rw------- 1 boinc boinc       655 Oct 12 23:02 MjYNDmVZ3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmphNMDm7IWMYo.diag
[2025-10-12 23:02:08] -rw-r--r-- 1 boinc boinc     22004 Oct 12 23:02 stderr.txt
[2025-10-12 23:02:08] HITS file was successfully produced:
[2025-10-12 23:02:08] -rw------- 1 boinc boinc 197357307 Oct 12 23:00 shared/HITS.pool.root.1
[2025-10-12 23:02:08]  *** Contents of shared directory: ***
[2025-10-12 23:02:08] total 412632
[2025-10-12 23:02:08] -rw-r--r-- 2 boinc boinc 223857972 Oct 12 22:11 ATLAS.root_0
[2025-10-12 23:02:08] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:11 start_atlas.sh
[2025-10-12 23:02:08] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:11 input.tar.gz
[2025-10-12 23:02:08] -rw------- 1 boinc boinc 197357307 Oct 12 23:00 HITS.pool.root.1
[2025-10-12 23:02:08] -rw------- 1 boinc boinc    727040 Oct 12 23:02 result.tar.gz
23:02:10 (510367): run_atlas exited; CPU time 16668.749492
23:02:10 (510367): called boinc_finish(0)

</stderr_txt>
]]>

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