Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:50:03 (3486779): wrapper (7.7.26015): starting
22:50:03 (3486779): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 22:50:03] Arguments: --nthreads 3
[2025-10-12 22:50:03] Threads: 3
[2025-10-12 22:50:03] Checking for CVMFS
[2025-10-12 22:50:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:50:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:50:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:50:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:50:04] 2.9.2.0 2810510 2265 79788 151636 1 57 3193797 36864001 0 130560 0 1773173 99.991 78651 658 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 22:50:04] CVMFS is ok
[2025-10-12 22:50:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:50:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:50:04] Further information can be found at the LHC@home message board.
[2025-10-12 22:50:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:50:04] Checking for apptainer binary...
[2025-10-12 22:50:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:50:04] Running /usr/bin/apptainer --version
[2025-10-12 22:50:04] apptainer version 1.4.1-1.1
[2025-10-12 22:50:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:50:04] atlasA115
[2025-10-12 22:50:04] apptainer works
[2025-10-12 22:50:04] Set ATHENA_PROC_NUMBER=3
[2025-10-12 22:50:04] Set ATHENA_CORE_NUMBER=3
[2025-10-12 22:50:04] Starting ATLAS job with PandaID=6838990115
[2025-10-12 22:50:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:17:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:17:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 00:17:43]  replicas=None
[2025-10-13 00:17:43]  scope=mc23_13p6TeV
[2025-10-13 00:17:43]  status=None
[2025-10-13 00:17:43]  status_code=0
[2025-10-13 00:17:43]  storage_token=
[2025-10-13 00:17:43]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838990115/log.46676269._065836.job.log.tgz.1
[2025-10-13 00:17:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/31/log.46676269._065836.job.log.tgz.1
[2025-10-13 00:17:43]  workdir=None
[2025-10-13 00:17:43] ]
[2025-10-13 00:17:43] 2025-10-12 22:17:04,883 | INFO     | transferring file log.46676269._065836.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838990115/log.46676269._065836.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 00:17:43] 2025-10-12 22:17:04,883 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838990115/log.46676269._065836.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0658
[2025-10-13 00:17:43] 2025-10-12 22:17:04,895 | INFO     | adding to output.list: log.46676269._065836.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/31/log.46676269._065836.job.log.tg
[2025-10-13 00:17:43] 2025-10-12 22:17:04,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:17:43] 2025-10-12 22:17:04,895 | INFO     | summary of transferred files:
[2025-10-13 00:17:43] 2025-10-12 22:17:04,895 | INFO     |  -- lfn=log.46676269._065836.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:17:43] 2025-10-12 22:17:04,895 | INFO     | stage-out finished correctly
[2025-10-13 00:17:43] 2025-10-12 22:17:05,760 | INFO     | time since job start (5216s) is within the limit (172800.0s)
[2025-10-13 00:17:43] 2025-10-12 22:17:06,069 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:17:43] 2025-10-12 22:17:06,583 | INFO     | job 6838990115 has state=finished
[2025-10-13 00:17:43] 2025-10-12 22:17:06,583 | INFO     | preparing for final server update for job 6838990115 in state='finished'
[2025-10-13 00:17:43] 2025-10-12 22:17:06,816 | INFO     | PID=3490498 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:17:43] 2025-10-12 22:17:07,176 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 00:17:43] 2025-10-12 22:17:07,176 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:17:43] 2025-10-12 22:17:07,177 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:17:43] 2025-10-12 22:17:07,177 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:17:43] 2025-10-12 22:17:07,177 | INFO     | job 6838990115 has finished - writing final server update
[2025-10-13 00:17:43] 2025-10-12 22:17:07,177 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:17:43] 2025-10-12 22:17:07,178 | INFO     | executing command: lscpu
[2025-10-13 00:17:43] 2025-10-12 22:17:07,192 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:17:43] 2025-10-12 22:17:07,817 | INFO     | time since job start (5218s) is within the limit (172800.0s)
[2025-10-13 00:17:43] 2025-10-12 22:17:08,960 | WARNING  | process 3496929 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:17:43] 2025-10-12 22:17:08,960 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838990115/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:17:43] 2025-10-12 22:17:09,015 | INFO     | number of running child processes to parent process 3496929: 1
[2025-10-13 00:17:43] 2025-10-12 22:17:09,015 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:17:43] 2025-10-12 22:17:09,822 | INFO     | time since job start (5220s) is within the limit (172800.0s)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,666 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:17:43] 2025-10-12 22:17:10,667 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3846.7358333333336
[2025-10-13 00:17:43] 2025-10-12 22:17:10,668 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838990115/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,668 | INFO     | extracted standard info from prmon json
[2025-10-13 00:17:43] 2025-10-12 22:17:10,668 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:17:43] 2025-10-12 22:17:10,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:17:43] 2025-10-12 22:17:10,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:17:43] 2025-10-12 22:17:10,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:17:43] 2025-10-12 22:17:10,669 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:17:43] 2025-10-12 22:17:10,669 | INFO     | sum of square deviations: 152858680.0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,669 | INFO     | sum of deviations: -10623241987.999998
[2025-10-13 00:17:43] 2025-10-12 22:17:10,669 | INFO     | mean x: 1760304913.0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | mean y: 2430933.582278481
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | -- intersect: 122338598323.38496
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | intersect: 122338598323.38496
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | chi2: 0.11060033472531264
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | -- intersect: 122338598323.38496
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | current memory leak: -69.50 B/s (using 79 data points, chi2=0.11)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | could have reported an average CPU frequency of 3843 MHz (6 samples)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | ..............................
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . Timing measurements:
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . get job = 0 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . initial setup = 1 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . payload setup = 2 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . stage-in = 0 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . payload execution = 5195 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . stage-out = 0 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | . log creation = 0 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,670 | INFO     | ..............................
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | 
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | job summary report
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | --------------------------------------------------
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | PanDA job id: 6838990115
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | task id: 46676269
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | errors: (none)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | pilot state: finished 
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | transexitcode: 0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | exeerrorcode: 0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | exeerrordiag: 
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | exitcode: 0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | exitmsg: OK
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | cpuconsumptiontime: 14889 s
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | nevents: 400
[2025-10-13 00:17:43] 2025-10-12 22:17:10,700 | INFO     | neventsw: 0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | pid: 3496929
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | pgrp: 3496929
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | corecount: 3
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | event service: False
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | sizes: {0: 2348858, 2: 2349120, 11: 2349148, 5201: 2375771, 5202: 2384830, 5203: 2384830, 5208: 2385152}
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | --------------------------------------------------
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | 
[2025-10-13 00:17:43] 2025-10-12 22:17:10,701 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | job 6838990115 has completed (purged errors)
[2025-10-13 00:17:43] 2025-10-12 22:17:10,713 | INFO     | overall cleanup function is called
[2025-10-13 00:17:43] 2025-10-12 22:17:11,720 | INFO     | --- collectZombieJob: --- 10, [3496929]
[2025-10-13 00:17:43] 2025-10-12 22:17:11,720 | INFO     | zombie collector waiting for pid 3496929
[2025-10-13 00:17:43] 2025-10-12 22:17:11,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:17:43] 2025-10-12 22:17:11,720 | INFO     | collected zombie processes
[2025-10-13 00:17:43] 2025-10-12 22:17:11,720 | INFO     | will attempt to kill all subprocesses of pid=3496929
[2025-10-13 00:17:43] 2025-10-12 22:17:11,761 | INFO     | process IDs to be killed: [3496929] (in reverse order)
[2025-10-13 00:17:43] 2025-10-12 22:17:11,784 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:17:43] 2025-10-12 22:17:11,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:17:43] 2025-10-12 22:17:11,786 | INFO     | did not find any defunct processes belonging to 3496929
[2025-10-13 00:17:43] 2025-10-12 22:17:11,787 | INFO     | did not find any defunct processes belonging to 3496929
[2025-10-13 00:17:43] 2025-10-12 22:17:11,787 | INFO     | ready for new job
[2025-10-13 00:17:43] 2025-10-12 22:17:11,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:17:43] 2025-10-12 22:17:11,788 | INFO     | ***************************************
[2025-10-13 00:17:43] 2025-10-12 22:17:11,788 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:17:43] 2025-10-12 22:17:11,788 | INFO     | ***************************************
[2025-10-13 00:17:43] 2025-10-12 22:17:11,788 | INFO     | 
[2025-10-13 00:17:43] 2025-10-12 22:17:11,788 | INFO     | architecture information:
[2025-10-13 00:17:43] 2025-10-12 22:17:11,788 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:17:43] 2025-10-12 22:17:11,796 | INFO     | cat /etc/os-release:
[2025-10-13 00:17:43] NAME="CentOS Linux"
[2025-10-13 00:17:43] VERSION="7 (Core)"
[2025-10-13 00:17:43] ID="centos"
[2025-10-13 00:17:43] ID_LIKE="rhel fedora"
[2025-10-13 00:17:43] VERSION_ID="7"
[2025-10-13 00:17:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:17:43] ANSI_COLOR="0;31"
[2025-10-13 00:17:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:17:43] HOME_URL="https://www.centos.org/"
[2025-10-13 00:17:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:17:43] 
[2025-10-13 00:17:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:17:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:17:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:17:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:17:43] 
[2025-10-13 00:17:43] 2025-10-12 22:17:11,797 | INFO     | ***************************************
[2025-10-13 00:17:43] 2025-10-12 22:17:12,300 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | INFO     | sufficient remaining disk space (356617551872 B)
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | INFO     | update_server=False
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:17:43] 2025-10-12 22:17:12,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:17:43] 2025-10-12 22:17:12,443 | INFO     | all payload control threads have been joined
[2025-10-13 00:17:43] 2025-10-12 22:17:12,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:17:43] 2025-10-12 22:17:12,525 | INFO     | aborting loop
[2025-10-13 00:17:43] 2025-10-12 22:17:12,928 | INFO     | all data control threads have been joined
[2025-10-13 00:17:43] 2025-10-12 22:17:12,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:17:43] 2025-10-12 22:17:13,319 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,319 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,449 | INFO     | [payload] control thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,531 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,632 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,645 | INFO     | all job control threads have been joined
[2025-10-13 00:17:43] 2025-10-12 22:17:13,799 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,811 | INFO     | [job] validate thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,934 | INFO     | [data] control thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:13,950 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:14,168 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:14,607 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:17:43] 2025-10-12 22:17:14,651 | INFO     | [job] control thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:14,700 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:14,787 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:14,944 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:16,320 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:22,371 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:17:43] 2025-10-12 22:17:23,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:17:43] 2025-10-12 22:17:25,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568325338944)>', '<ExcThread(monitor, started 140567551923968)>']
[2025-10-13 00:17:43] 2025-10-12 22:17:30,315 | INFO     | all workflow threads have been joined
[2025-10-13 00:17:43] 2025-10-12 22:17:30,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:17:43] 2025-10-12 22:17:30,316 | INFO     | traces error code: 0
[2025-10-13 00:17:43] 2025-10-12 22:17:30,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:17:43] 2025-10-12 22:17:42,936 | INFO     | PID=3490498 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:17:43] 2025-10-12 22:17:42,937 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:17:43] 2025-10-12 22:17:42,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:17:43] 2025-10-12 22:17:42,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:17:43] 2025-10-12 22:17:42,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:17:43] 2025-10-12 22:17:42,937 | INFO     | [monitor] control thread has ended
[2025-10-13 00:17:43] 2025-10-12 22:17:42,984 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:17:43] 2025-10-12 22:17:42,986 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:17:43] 2025-10-12 22:17:42,988 [wrapper] pilotpid: 3490498
[2025-10-13 00:17:43] 2025-10-12 22:17:42,991 [wrapper] Pilot exit status: 0
[2025-10-13 00:17:43] 2025-10-12 22:17:42,998 [wrapper] pandaids: 6838990115
[2025-10-13 00:17:43] 2025-10-12 22:17:43,013 [wrapper] cleanup supervisor_pilot 3509045 3490499
[2025-10-13 00:17:43] 2025-10-12 22:17:43,015 [wrapper] Test setup, not cleaning
[2025-10-13 00:17:43] 2025-10-12 22:17:43,018 [wrapper] apfmon messages muted
[2025-10-13 00:17:43] 2025-10-12 22:17:43,020 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:17:43] 2025-10-12 22:17:43,022 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:17:43]  *** Error codes and diagnostics ***
[2025-10-13 00:17:43]     "exeErrorCode": 0,
[2025-10-13 00:17:43]     "exeErrorDiag": "",
[2025-10-13 00:17:43]     "pilotErrorCode": 0,
[2025-10-13 00:17:43]     "pilotErrorDiag": "",
[2025-10-13 00:17:43]  *** Listing of results directory ***
[2025-10-13 00:17:43] total 414772
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 00:06 queuedata.json
[2025-10-13 00:17:43] -rwx------ 1 boinc boinc     36292 Oct 12 00:07 runpilot2-wrapper.sh
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:17:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:50 run_atlas
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:50 job.xml
[2025-10-13 00:17:43] -rw-r--r-- 2 boinc boinc 220008907 Oct 12 22:50 EVNT.46676267._002645.pool.root.1
[2025-10-13 00:17:43] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:50 input.tar.gz
[2025-10-13 00:17:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:50 start_atlas.sh
[2025-10-13 00:17:43] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:50 shared
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:50 boinc_setup_complete
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc      6441 Oct 12 22:50 init_data.xml
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:50 boinc_lockfile
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc      2549 Oct 12 22:50 pandaJob.out
[2025-10-13 00:17:43] -rw------- 1 boinc boinc    975536 Oct 12 22:50 agis_schedconf.cvmfs.json
[2025-10-13 00:17:43] -rw------- 1 boinc boinc   1560580 Oct 12 22:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:17:43] drwx------ 5 boinc boinc      4096 Oct 12 22:50 pilot3
[2025-10-13 00:17:43] -rw------- 1 boinc boinc 198807498 Oct 13 00:16 HITS.46676269._065836.pool.root.1
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc       529 Oct 13 00:16 boinc_task_state.xml
[2025-10-13 00:17:43] -rw------- 1 boinc boinc      1020 Oct 13 00:17 memory_monitor_summary.json
[2025-10-13 00:17:43] -rw------- 1 boinc boinc    244967 Oct 13 00:17 log.46676269._065836.job.log.tgz.1
[2025-10-13 00:17:43] -rw------- 1 boinc boinc      7768 Oct 13 00:17 heartbeat.json
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:17 wrapper_checkpoint.txt
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:17 boinc_mmap_file
[2025-10-13 00:17:43] -rw------- 1 boinc boinc       747 Oct 13 00:17 pilotlog.txt
[2025-10-13 00:17:43] -rw------- 1 boinc boinc        95 Oct 13 00:17 pilot_heartbeat.json
[2025-10-13 00:17:43] -rw------- 1 boinc boinc    764126 Oct 13 00:17 log.46676269._065836.job.log.1
[2025-10-13 00:17:43] -rw------- 1 boinc boinc       357 Oct 13 00:17 output.list
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:17 runtime_log
[2025-10-13 00:17:43] -rw------- 1 boinc boinc   1024000 Oct 13 00:17 result.tar.gz
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc      8792 Oct 13 00:17 runtime_log.err
[2025-10-13 00:17:43] -rw------- 1 boinc boinc       661 Oct 13 00:17 TxgKDmtvwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjkhNDmwRZCWn.diag
[2025-10-13 00:17:43] -rw-r--r-- 1 boinc boinc     21959 Oct 13 00:17 stderr.txt
[2025-10-13 00:17:43] HITS file was successfully produced:
[2025-10-13 00:17:43] -rw------- 1 boinc boinc 198807498 Oct 13 00:16 shared/HITS.pool.root.1
[2025-10-13 00:17:43]  *** Contents of shared directory: ***
[2025-10-13 00:17:43] total 410584
[2025-10-13 00:17:43] -rw-r--r-- 2 boinc boinc 220008907 Oct 12 22:50 ATLAS.root_0
[2025-10-13 00:17:43] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:50 input.tar.gz
[2025-10-13 00:17:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:50 start_atlas.sh
[2025-10-13 00:17:43] -rw------- 1 boinc boinc 198807498 Oct 13 00:16 HITS.pool.root.1
[2025-10-13 00:17:43] -rw------- 1 boinc boinc   1024000 Oct 13 00:17 result.tar.gz
00:17:44 (3486779): run_atlas exited; CPU time 14905.008451
00:17:44 (3486779): called boinc_finish(0)

</stderr_txt>
]]>

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