Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:20:36 (3316753): wrapper (7.7.26015): starting
15:20:36 (3316753): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 15:20:36] Arguments: --nthreads 6
[2025-10-12 15:20:36] Threads: 6
[2025-10-12 15:20:36] Checking for CVMFS
[2025-10-12 15:20:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:20:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:20:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:20:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:20:37] 2.11.5.0 3651556 3931 73072 151611 3 57 38647347 52428801 1858 130560 0 12190752 99.998 133854 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 15:20:37] CVMFS is ok
[2025-10-12 15:20:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:20:37] Checking for apptainer binary...
[2025-10-12 15:20:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:20:37] Running /usr/bin/apptainer --version
[2025-10-12 15:20:37] apptainer version 1.3.5-1.el9
[2025-10-12 15:20:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:20:37] testio008
[2025-10-12 15:20:37] apptainer works
[2025-10-12 15:20:37] Set ATHENA_PROC_NUMBER=6
[2025-10-12 15:20:37] Set ATHENA_CORE_NUMBER=6
[2025-10-12 15:20:37] Starting ATLAS job with PandaID=6839164262
[2025-10-12 15:20:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:31:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:31:59] 2025-10-12 07:30:42,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:44,157 | INFO     | time since job start (4197s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:45,089 | INFO     | monitor loop #332: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:30:45,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:46,162 | INFO     | time since job start (4199s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:47,592 | INFO     | monitor loop #333: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:30:47,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:48,167 | INFO     | time since job start (4201s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:50,095 | INFO     | monitor loop #334: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:30:50,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:50,172 | INFO     | time since job start (4203s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:52,176 | INFO     | time since job start (4205s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:52,598 | INFO     | monitor loop #335: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:30:52,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:54,178 | INFO     | time since job start (4207s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:55,100 | INFO     | monitor loop #336: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:30:55,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:56,183 | INFO     | time since job start (4209s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:30:57,603 | INFO     | monitor loop #337: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:30:57,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:30:58,188 | INFO     | time since job start (4211s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:31:00,106 | INFO     | monitor loop #338: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:31:00,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:31:00,193 | INFO     | time since job start (4213s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:31:02,198 | INFO     | time since job start (4215s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:31:02,609 | INFO     | monitor loop #339: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:31:02,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:31:03,248 | INFO     | PID=3320520 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:31:59] 2025-10-12 07:31:03,248 | INFO     | .. there are 3 such processes running
[2025-10-12 16:31:59] 2025-10-12 07:31:04,248 | INFO     | time since job start (4217s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:31:05,112 | INFO     | monitor loop #340: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:31:05,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:31:06,254 | INFO     | time since job start (4219s) is within the limit (172800.0s)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,615 | INFO     | monitor loop #341: job 0:6839164262 is in state 'finished'
[2025-10-12 16:31:59] 2025-10-12 07:31:07,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,879 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:31:59] 2025-10-12 07:31:07,880 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4149.967999999999
[2025-10-12 16:31:59] 2025-10-12 07:31:07,882 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6839164262/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,882 | INFO     | extracted standard info from prmon json
[2025-10-12 16:31:59] 2025-10-12 07:31:07,882 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:31:59] 2025-10-12 07:31:07,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:31:59] 2025-10-12 07:31:07,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:31:59] 2025-10-12 07:31:07,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | sum of deviations: -6593959394.999998
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | mean x: 1760252201.0
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | mean y: 2743374.1639344264
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | -- intersect: 164959445567.27594
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | intersect: 164959445567.27594
[2025-10-12 16:31:59] 2025-10-12 07:31:07,883 | INFO     | chi2: 0.09081077477475238
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | -- intersect: 164959445567.27594
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | current memory leak: -93.71 B/s (using 61 data points, chi2=0.09)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | could have reported an average CPU frequency of 3378 MHz (6 samples)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | ..............................
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . Timing measurements:
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . get job = 0 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . initial setup = 5 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . payload setup = 2 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . stage-in = 0 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . payload execution = 4121 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . stage-out = 0 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | . log creation = 0 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,884 | INFO     | ..............................
[2025-10-12 16:31:59] 2025-10-12 07:31:07,921 | INFO     | 
[2025-10-12 16:31:59] 2025-10-12 07:31:07,921 | INFO     | job summary report
[2025-10-12 16:31:59] 2025-10-12 07:31:07,921 | INFO     | --------------------------------------------------
[2025-10-12 16:31:59] 2025-10-12 07:31:07,921 | INFO     | PanDA job id: 6839164262
[2025-10-12 16:31:59] 2025-10-12 07:31:07,921 | INFO     | task id: 46676269
[2025-10-12 16:31:59] 2025-10-12 07:31:07,921 | INFO     | errors: (none)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | pilot state: finished 
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | transexitcode: 0
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | exeerrorcode: 0
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | exeerrordiag: 
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | exitcode: 0
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | exitmsg: OK
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | cpuconsumptiontime: 22062 s
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | nevents: 400
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | neventsw: 0
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | pid: 3327248
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | pgrp: 3327248
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | corecount: 6
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | event service: False
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | sizes: {0: 2348855, 2: 2349117, 11: 2349145, 4128: 2375076, 4129: 2384074, 4131: 2384130, 4208: 2384452}
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | --------------------------------------------------
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | 
[2025-10-12 16:31:59] 2025-10-12 07:31:07,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:31:59] 2025-10-12 07:31:07,932 | INFO     | job 6839164262 has completed (purged errors)
[2025-10-12 16:31:59] 2025-10-12 07:31:07,932 | INFO     | overall cleanup function is called
[2025-10-12 16:31:59] 2025-10-12 07:31:08,937 | INFO     | --- collectZombieJob: --- 10, [3327248]
[2025-10-12 16:31:59] 2025-10-12 07:31:08,938 | INFO     | zombie collector waiting for pid 3327248
[2025-10-12 16:31:59] 2025-10-12 07:31:08,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:31:59] 2025-10-12 07:31:08,938 | INFO     | collected zombie processes
[2025-10-12 16:31:59] 2025-10-12 07:31:08,938 | INFO     | will attempt to kill all subprocesses of pid=3327248
[2025-10-12 16:31:59] 2025-10-12 07:31:08,974 | INFO     | process IDs to be killed: [3327248] (in reverse order)
[2025-10-12 16:31:59] 2025-10-12 07:31:08,993 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:31:59] 2025-10-12 07:31:08,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:31:59] 2025-10-12 07:31:08,995 | INFO     | did not find any defunct processes belonging to 3327248
[2025-10-12 16:31:59] 2025-10-12 07:31:08,997 | INFO     | did not find any defunct processes belonging to 3327248
[2025-10-12 16:31:59] 2025-10-12 07:31:08,997 | INFO     | ready for new job
[2025-10-12 16:31:59] 2025-10-12 07:31:08,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:31:59] 2025-10-12 07:31:08,998 | INFO     | ***************************************
[2025-10-12 16:31:59] 2025-10-12 07:31:08,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:31:59] 2025-10-12 07:31:08,998 | INFO     | ***************************************
[2025-10-12 16:31:59] 2025-10-12 07:31:08,998 | INFO     | 
[2025-10-12 16:31:59] 2025-10-12 07:31:08,998 | INFO     | architecture information:
[2025-10-12 16:31:59] 2025-10-12 07:31:08,998 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:31:59] 2025-10-12 07:31:09,006 | INFO     | cat /etc/os-release:
[2025-10-12 16:31:59] NAME="CentOS Linux"
[2025-10-12 16:31:59] VERSION="7 (Core)"
[2025-10-12 16:31:59] ID="centos"
[2025-10-12 16:31:59] ID_LIKE="rhel fedora"
[2025-10-12 16:31:59] VERSION_ID="7"
[2025-10-12 16:31:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:31:59] ANSI_COLOR="0;31"
[2025-10-12 16:31:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:31:59] HOME_URL="https://www.centos.org/"
[2025-10-12 16:31:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:31:59] 
[2025-10-12 16:31:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:31:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:31:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:31:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:31:59] 
[2025-10-12 16:31:59] 2025-10-12 07:31:09,006 | INFO     | ***************************************
[2025-10-12 16:31:59] 2025-10-12 07:31:09,509 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 16:31:59] 2025-10-12 07:31:09,521 | INFO     | sufficient remaining disk space (281336086528 B)
[2025-10-12 16:31:59] 2025-10-12 07:31:09,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:31:59] 2025-10-12 07:31:09,521 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:31:59] 2025-10-12 07:31:09,521 | INFO     | update_server=False
[2025-10-12 16:31:59] 2025-10-12 07:31:09,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:31:59] 2025-10-12 07:31:09,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:31:59] 2025-10-12 07:31:09,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:31:59] 2025-10-12 07:31:09,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:31:59] 2025-10-12 07:31:09,522 | INFO     | aborting loop
[2025-10-12 16:31:59] 2025-10-12 07:31:09,671 | INFO     | all data control threads have been joined
[2025-10-12 16:31:59] 2025-10-12 07:31:10,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:31:59] 2025-10-12 07:31:10,180 | INFO     | all job control threads have been joined
[2025-10-12 16:31:59] 2025-10-12 07:31:10,340 | INFO     | all payload control threads have been joined
[2025-10-12 16:31:59] 2025-10-12 07:31:10,527 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:10,527 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:10,527 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:10,634 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:10,676 | INFO     | [data] control thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:10,807 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,185 | INFO     | [job] control thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,207 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,346 | INFO     | [payload] control thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,349 | INFO     | [job] validate thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,468 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,625 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:11,841 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:12,121 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:13,527 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:20,170 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:31:59] 2025-10-12 07:31:21,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:31:59] 2025-10-12 07:31:39,390 | INFO     | PID=3320520 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:31:59] 2025-10-12 07:31:39,390 | INFO     | .. there are 3 such processes running
[2025-10-12 16:31:59] 2025-10-12 07:31:39,391 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:31:59] 2025-10-12 07:31:39,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:31:59] 2025-10-12 07:31:39,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:31:59] 2025-10-12 07:31:54,277 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:31:59] 2025-10-12 07:31:54,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684364220224)>', '<ExcThread(monitor, started 140683591542528)>']
[2025-10-12 16:31:59] 2025-10-12 07:31:55,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:31:59] 2025-10-12 07:31:55,466 | INFO     | [monitor] control thread has ended
[2025-10-12 16:31:59] 2025-10-12 07:31:59,501 | INFO     | all workflow threads have been joined
[2025-10-12 16:31:59] 2025-10-12 07:31:59,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:31:59] 2025-10-12 07:31:59,502 | INFO     | traces error code: 0
[2025-10-12 16:31:59] 2025-10-12 07:31:59,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:31:59] 2025-10-12 07:31:59,555 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:31:59] 2025-10-12 07:31:59,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:31:59] 2025-10-12 07:31:59,557 [wrapper] pilotpid: 3320520
[2025-10-12 16:31:59] 2025-10-12 07:31:59,558 [wrapper] Pilot exit status: 0
[2025-10-12 16:31:59] 2025-10-12 07:31:59,561 [wrapper] pandaids: 6839164262
[2025-10-12 16:31:59] 2025-10-12 07:31:59,571 [wrapper] cleanup supervisor_pilot 3385103 3320521
[2025-10-12 16:31:59] 2025-10-12 07:31:59,573 [wrapper] Test setup, not cleaning
[2025-10-12 16:31:59] 2025-10-12 07:31:59,573 [wrapper] apfmon messages muted
[2025-10-12 16:31:59] 2025-10-12 07:31:59,574 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:31:59] 2025-10-12 07:31:59,575 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:31:59]  *** Error codes and diagnostics ***
[2025-10-12 16:31:59]     "exeErrorCode": 0,
[2025-10-12 16:31:59]     "exeErrorDiag": "",
[2025-10-12 16:31:59]     "pilotErrorCode": 0,
[2025-10-12 16:31:59]     "pilotErrorDiag": "",
[2025-10-12 16:31:59]  *** Listing of results directory ***
[2025-10-12 16:31:59] total 414692
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 16:31:59] -rwx------. 1 boinc boinc     36292 Oct 12 09:37 runpilot2-wrapper.sh
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc      5112 Oct 12 09:37 queuedata.json
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc       100 Oct 12 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:31:59] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 15:20 run_atlas
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc       105 Oct 12 15:20 job.xml
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc      9509 Oct 12 15:20 init_data.xml
[2025-10-12 16:31:59] -rw-r--r--. 2 boinc boinc 218952513 Oct 12 15:20 EVNT.46676267._003102.pool.root.1
[2025-10-12 16:31:59] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:20 start_atlas.sh
[2025-10-12 16:31:59] drwxrwx--x. 2 boinc boinc        68 Oct 12 15:20 shared
[2025-10-12 16:31:59] -rw-r--r--. 2 boinc boinc    569679 Oct 12 15:20 input.tar.gz
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc         0 Oct 12 15:20 boinc_lockfile
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc      2549 Oct 12 15:20 pandaJob.out
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc    975528 Oct 12 15:20 agis_schedconf.cvmfs.json
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc   1560580 Oct 12 15:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:31:59] drwx------. 5 boinc boinc      4096 Oct 12 15:20 pilot3
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc 199973584 Oct 12 16:29 HITS.46676269._067851.pool.root.1
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc       529 Oct 12 16:29 boinc_task_state.xml
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc      1022 Oct 12 16:29 memory_monitor_summary.json
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc    275190 Oct 12 16:29 log.46676269._067851.job.log.tgz.1
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc      7769 Oct 12 16:31 heartbeat.json
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc        95 Oct 12 16:31 pilot_heartbeat.json
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:31 boinc_mmap_file
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc        27 Oct 12 16:31 wrapper_checkpoint.txt
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc      4896 Oct 12 16:31 pilotlog.txt
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc    633042 Oct 12 16:31 log.46676269._067851.job.log.1
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc       357 Oct 12 16:31 output.list
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:31 runtime_log
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc    931840 Oct 12 16:31 result.tar.gz
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc      8661 Oct 12 16:31 runtime_log.err
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc       641 Oct 12 16:31 eaKLDm2GzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm15hNDmPl6YJn.diag
[2025-10-12 16:31:59] -rw-r--r--. 1 boinc boinc     21963 Oct 12 16:31 stderr.txt
[2025-10-12 16:31:59] HITS file was successfully produced:
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc 199973584 Oct 12 16:29 shared/HITS.pool.root.1
[2025-10-12 16:31:59]  *** Contents of shared directory: ***
[2025-10-12 16:31:59] total 410600
[2025-10-12 16:31:59] -rw-r--r--. 2 boinc boinc 218952513 Oct 12 15:20 ATLAS.root_0
[2025-10-12 16:31:59] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:20 start_atlas.sh
[2025-10-12 16:31:59] -rw-r--r--. 2 boinc boinc    569679 Oct 12 15:20 input.tar.gz
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc 199973584 Oct 12 16:29 HITS.pool.root.1
[2025-10-12 16:31:59] -rw-------. 1 boinc boinc    931840 Oct 12 16:31 result.tar.gz
16:32:01 (3316753): run_atlas exited; CPU time 22085.692102
16:32:01 (3316753): called boinc_finish(0)

</stderr_txt>
]]>

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