Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:11:27 (27982): wrapper (7.7.26015): starting
02:11:27 (27982): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 02:11:27] Arguments: --nthreads 8
[2025-10-12 02:11:27] Threads: 8
[2025-10-12 02:11:27] Checking for CVMFS
[2025-10-12 02:11:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:11:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:11:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:11:28] 2.11.2.0 2918 77309 81412 151610 1 56 13759473 20275201 1 130560 0 36003439 99.988 2460981 40499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:11:28] CVMFS is ok
[2025-10-12 02:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:11:28] Further information can be found at the LHC@home message board.
[2025-10-12 02:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:11:28] Checking for apptainer binary...
[2025-10-12 02:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:11:28] Running /usr/bin/apptainer --version
[2025-10-12 02:11:28] apptainer version 1.3.2-1.el7
[2025-10-12 02:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:11:29] c-115-8.aglt2.org
[2025-10-12 02:11:29] apptainer works
[2025-10-12 02:11:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 02:11:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 02:11:29] Starting ATLAS job with PandaID=6839164346
[2025-10-12 02:11:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:08:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:08:03] 2025-10-12 08:07:09,982 | INFO     | -- intersect: -59284444737.13239
[2025-10-12 04:08:03] 2025-10-12 08:07:09,982 | INFO     | intersect: -59284444737.13239
[2025-10-12 04:08:03] 2025-10-12 08:07:09,982 | INFO     | chi2: 1.3292997161139681
[2025-10-12 04:08:03] 2025-10-12 08:07:09,982 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,983 | INFO     | sum of deviations: 14557756689.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,983 | INFO     | mean x: 1760252800.5
[2025-10-12 04:08:03] 2025-10-12 08:07:09,983 | INFO     | mean y: 2510354.277777778
[2025-10-12 04:08:03] 2025-10-12 08:07:09,983 | INFO     | -- intersect: -65605526882.32337
[2025-10-12 04:08:03] 2025-10-12 08:07:09,983 | INFO     | intersect: -65605526882.32337
[2025-10-12 04:08:03] 2025-10-12 08:07:09,983 | INFO     | chi2: 1.3303462214584887
[2025-10-12 04:08:03] 2025-10-12 08:07:09,984 | INFO     | current chi2=1.3303462214584887 (change=-0.07872606394439578 %)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,984 | INFO     | right removable region: 107
[2025-10-12 04:08:03] 2025-10-12 08:07:09,984 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,984 | INFO     | sum of deviations: -609715007.9999999
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | mean x: 1760253105.5
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | mean y: 2552897.6666666665
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | -- intersect: 2750380927.3801584
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | intersect: 2750380927.3801584
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | chi2: 0.008478546704212383
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | current chi2=0.008478546704212383 (change=99.36217945423186 %)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,985 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,986 | INFO     | sum of deviations: -1643597908.0000002
[2025-10-12 04:08:03] 2025-10-12 08:07:09,986 | INFO     | mean x: 1760253258.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,986 | INFO     | mean y: 2555917.9126213593
[2025-10-12 04:08:03] 2025-10-12 08:07:09,986 | INFO     | -- intersect: 8541842263.617226
[2025-10-12 04:08:03] 2025-10-12 08:07:09,986 | INFO     | intersect: 8541842263.617226
[2025-10-12 04:08:03] 2025-10-12 08:07:09,987 | INFO     | chi2: 0.003901685577646301
[2025-10-12 04:08:03] 2025-10-12 08:07:09,987 | INFO     | current chi2=0.003901685577646301 (change=53.981670281914795 %)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,987 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 04:08:03] 2025-10-12 08:07:09,987 | INFO     | sum of deviations: -1944385736.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,988 | INFO     | mean x: 1760253410.5
[2025-10-12 04:08:03] 2025-10-12 08:07:09,988 | INFO     | mean y: 2556882.673469388
[2025-10-12 04:08:03] 2025-10-12 08:07:09,988 | INFO     | -- intersect: 11731157349.152767
[2025-10-12 04:08:03] 2025-10-12 08:07:09,988 | INFO     | intersect: 11731157349.152767
[2025-10-12 04:08:03] 2025-10-12 08:07:09,988 | INFO     | chi2: 0.0027863410057527714
[2025-10-12 04:08:03] 2025-10-12 08:07:09,988 | INFO     | current chi2=0.0027863410057527714 (change=28.58622381781884 %)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,989 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,989 | INFO     | sum of deviations: -1939286624.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,989 | INFO     | mean x: 1760253563.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,989 | INFO     | mean y: 2556855.946236559
[2025-10-12 04:08:03] 2025-10-12 08:07:09,989 | INFO     | -- intersect: 13690562656.19822
[2025-10-12 04:08:03] 2025-10-12 08:07:09,990 | INFO     | intersect: 13690562656.19822
[2025-10-12 04:08:03] 2025-10-12 08:07:09,990 | INFO     | chi2: 0.002436686185714077
[2025-10-12 04:08:03] 2025-10-12 08:07:09,990 | INFO     | current chi2=0.002436686185714077 (change=12.548888284556186 %)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,990 | INFO     | left removable region: 40
[2025-10-12 04:08:03] 2025-10-12 08:07:09,990 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,991 | INFO     | sum of deviations: -1178384336.0000002
[2025-10-12 04:08:03] 2025-10-12 08:07:09,991 | INFO     | mean x: 1760253990.0
[2025-10-12 04:08:03] 2025-10-12 08:07:09,991 | INFO     | mean y: 2555026.2835820895
[2025-10-12 04:08:03] 2025-10-12 08:07:09,991 | INFO     | -- intersect: 22248774800.948162
[2025-10-12 04:08:03] 2025-10-12 08:07:09,991 | INFO     | intersect: 22248774800.948162
[2025-10-12 04:08:03] 2025-10-12 08:07:09,991 | INFO     | chi2: 0.0018369379318693266
[2025-10-12 04:08:03] 2025-10-12 08:07:09,992 | INFO     | -- intersect: 22248774800.948162
[2025-10-12 04:08:03] 2025-10-12 08:07:09,992 | INFO     | current memory leak: -12.64 B/s (using 67 data points, chi2=0.00)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,992 | INFO     | could have reported an average CPU frequency of 2100 MHz (7 samples)
[2025-10-12 04:08:03] 2025-10-12 08:07:09,992 | INFO     | ..............................
[2025-10-12 04:08:03] 2025-10-12 08:07:09,992 | INFO     | . Timing measurements:
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . get job = 0 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . initial setup = 2 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . payload setup = 7 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . stage-in = 0 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . payload execution = 6886 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . stage-out = 0 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,993 | INFO     | . log creation = 0 s
[2025-10-12 04:08:03] 2025-10-12 08:07:09,994 | INFO     | ..............................
[2025-10-12 04:08:03] 2025-10-12 08:07:10,091 | INFO     | 
[2025-10-12 04:08:03] 2025-10-12 08:07:10,091 | INFO     | job summary report
[2025-10-12 04:08:03] 2025-10-12 08:07:10,091 | INFO     | --------------------------------------------------
[2025-10-12 04:08:03] 2025-10-12 08:07:10,092 | INFO     | PanDA job id: 6839164346
[2025-10-12 04:08:03] 2025-10-12 08:07:10,092 | INFO     | task id: 46676269
[2025-10-12 04:08:03] 2025-10-12 08:07:10,092 | INFO     | errors: (none)
[2025-10-12 04:08:03] 2025-10-12 08:07:10,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:08:03] 2025-10-12 08:07:10,092 | INFO     | pilot state: finished 
[2025-10-12 04:08:03] 2025-10-12 08:07:10,093 | INFO     | transexitcode: 0
[2025-10-12 04:08:03] 2025-10-12 08:07:10,093 | INFO     | exeerrorcode: 0
[2025-10-12 04:08:03] 2025-10-12 08:07:10,093 | INFO     | exeerrordiag: 
[2025-10-12 04:08:03] 2025-10-12 08:07:10,093 | INFO     | exitcode: 0
[2025-10-12 04:08:03] 2025-10-12 08:07:10,093 | INFO     | exitmsg: OK
[2025-10-12 04:08:03] 2025-10-12 08:07:10,093 | INFO     | cpuconsumptiontime: 51339 s
[2025-10-12 04:08:03] 2025-10-12 08:07:10,094 | INFO     | nevents: 400
[2025-10-12 04:08:03] 2025-10-12 08:07:10,094 | INFO     | neventsw: 0
[2025-10-12 04:08:03] 2025-10-12 08:07:10,094 | INFO     | pid: 6031
[2025-10-12 04:08:03] 2025-10-12 08:07:10,094 | INFO     | pgrp: 6031
[2025-10-12 04:08:03] 2025-10-12 08:07:10,094 | INFO     | corecount: 8
[2025-10-12 04:08:03] 2025-10-12 08:07:10,094 | INFO     | event service: False
[2025-10-12 04:08:03] 2025-10-12 08:07:10,095 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6898: 2376315, 6900: 2385369, 6907: 2385507}
[2025-10-12 04:08:03] 2025-10-12 08:07:10,095 | INFO     | --------------------------------------------------
[2025-10-12 04:08:03] 2025-10-12 08:07:10,095 | INFO     | 
[2025-10-12 04:08:03] 2025-10-12 08:07:10,095 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 04:08:03] 2025-10-12 08:07:10,125 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,125 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,125 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,125 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:08:03] 2025-10-12 08:07:10,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:08:03] 2025-10-12 08:07:10,129 | INFO     | job 6839164346 has completed (purged errors)
[2025-10-12 04:08:03] 2025-10-12 08:07:10,129 | INFO     | overall cleanup function is called
[2025-10-12 04:08:03] 2025-10-12 08:07:11,137 | INFO     | --- collectZombieJob: --- 10, [6031]
[2025-10-12 04:08:03] 2025-10-12 08:07:11,138 | INFO     | zombie collector waiting for pid 6031
[2025-10-12 04:08:03] 2025-10-12 08:07:11,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:08:03] 2025-10-12 08:07:11,139 | INFO     | collected zombie processes
[2025-10-12 04:08:03] 2025-10-12 08:07:11,139 | INFO     | will attempt to kill all subprocesses of pid=6031
[2025-10-12 04:08:03] 2025-10-12 08:07:11,224 | INFO     | process IDs to be killed: [6031] (in reverse order)
[2025-10-12 04:08:03] 2025-10-12 08:07:11,278 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:08:03] 2025-10-12 08:07:11,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:08:03] 2025-10-12 08:07:11,282 | INFO     | did not find any defunct processes belonging to 6031
[2025-10-12 04:08:03] 2025-10-12 08:07:11,285 | INFO     | did not find any defunct processes belonging to 6031
[2025-10-12 04:08:03] 2025-10-12 08:07:11,285 | INFO     | ready for new job
[2025-10-12 04:08:03] 2025-10-12 08:07:11,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:08:03] 2025-10-12 08:07:11,287 | INFO     | ***************************************
[2025-10-12 04:08:03] 2025-10-12 08:07:11,287 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:08:03] 2025-10-12 08:07:11,287 | INFO     | ***************************************
[2025-10-12 04:08:03] 2025-10-12 08:07:11,287 | INFO     | 
[2025-10-12 04:08:03] 2025-10-12 08:07:11,288 | INFO     | architecture information:
[2025-10-12 04:08:03] 2025-10-12 08:07:11,288 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:08:03] 2025-10-12 08:07:11,308 | INFO     | cat /etc/os-release:
[2025-10-12 04:08:03] NAME="CentOS Linux"
[2025-10-12 04:08:03] VERSION="7 (Core)"
[2025-10-12 04:08:03] ID="centos"
[2025-10-12 04:08:03] ID_LIKE="rhel fedora"
[2025-10-12 04:08:03] VERSION_ID="7"
[2025-10-12 04:08:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:08:03] ANSI_COLOR="0;31"
[2025-10-12 04:08:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:08:03] HOME_URL="https://www.centos.org/"
[2025-10-12 04:08:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:08:03] 
[2025-10-12 04:08:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:08:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:08:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:08:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:08:03] 
[2025-10-12 04:08:03] 2025-10-12 08:07:11,308 | INFO     | ***************************************
[2025-10-12 04:08:03] 2025-10-12 08:07:11,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 04:08:03] 2025-10-12 08:07:11,833 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-10-12 04:08:03] 2025-10-12 08:07:11,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:08:03] 2025-10-12 08:07:11,833 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:08:03] 2025-10-12 08:07:11,834 | INFO     | update_server=False
[2025-10-12 04:08:03] 2025-10-12 08:07:11,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:08:03] 2025-10-12 08:07:11,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:08:03] 2025-10-12 08:07:12,198 | INFO     | all data control threads have been joined
[2025-10-12 04:08:03] 2025-10-12 08:07:12,367 | INFO     | all job control threads have been joined
[2025-10-12 04:08:03] 2025-10-12 08:07:12,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:08:03] 2025-10-12 08:07:12,759 | INFO     | aborting loop
[2025-10-12 04:08:03] 2025-10-12 08:07:12,840 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:12,841 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:12,852 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,073 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:08:03] 2025-10-12 08:07:13,204 | INFO     | [data] control thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,241 | INFO     | [job] validate thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,253 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,265 | INFO     | all payload control threads have been joined
[2025-10-12 04:08:03] 2025-10-12 08:07:13,278 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,373 | INFO     | [job] control thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,500 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:08:03] 2025-10-12 08:07:13,764 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:13,992 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:14,271 | INFO     | [payload] control thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:15,129 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:17,591 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:22,048 | INFO     | job.realtimelogging is not enabled
[2025-10-12 04:08:03] 2025-10-12 08:07:23,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:08:03] 2025-10-12 08:07:42,009 | INFO     | PID=31923 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 04:08:03] 2025-10-12 08:07:42,009 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:08:03] 2025-10-12 08:07:42,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:08:03] 2025-10-12 08:07:42,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:08:03] 2025-10-12 08:07:57,337 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:08:03] 2025-10-12 08:07:57,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894044120896)>', '<ExcThread(monitor, started 139893359490816)>']
[2025-10-12 04:08:03] 2025-10-12 08:07:58,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:08:03] 2025-10-12 08:07:58,088 | INFO     | [monitor] control thread has ended
[2025-10-12 04:08:03] 2025-10-12 08:08:02,698 | INFO     | all workflow threads have been joined
[2025-10-12 04:08:03] 2025-10-12 08:08:02,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:08:03] 2025-10-12 08:08:02,699 | INFO     | traces error code: 0
[2025-10-12 04:08:03] 2025-10-12 08:08:02,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:08:03] 2025-10-12 08:08:02,819 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:08:03] 2025-10-12 08:08:02,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:08:03] 2025-10-12 08:08:02,830 [wrapper] pilotpid: 31923
[2025-10-12 04:08:03] 2025-10-12 08:08:02,834 [wrapper] Pilot exit status: 0
[2025-10-12 04:08:03] 2025-10-12 08:08:02,854 [wrapper] pandaids: 6839164346
[2025-10-12 04:08:03] 2025-10-12 08:08:02,898 [wrapper] cleanup supervisor_pilot 18607 31924
[2025-10-12 04:08:03] 2025-10-12 08:08:02,903 [wrapper] Test setup, not cleaning
[2025-10-12 04:08:03] 2025-10-12 08:08:02,908 [wrapper] apfmon messages muted
[2025-10-12 04:08:03] 2025-10-12 08:08:02,913 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:08:03] 2025-10-12 08:08:02,917 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:08:03]  *** Error codes and diagnostics ***
[2025-10-12 04:08:03]     "exeErrorCode": 0,
[2025-10-12 04:08:03]     "exeErrorDiag": "",
[2025-10-12 04:08:03]     "pilotErrorCode": 0,
[2025-10-12 04:08:03]     "pilotErrorDiag": "",
[2025-10-12 04:08:03]  *** Listing of results directory ***
[2025-10-12 04:08:03] total 418128
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:38 queuedata.json
[2025-10-12 04:08:03] -rwx------ 1 boincer umatlas     36292 Oct 11 20:40 runpilot2-wrapper.sh
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas       100 Oct 12 02:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:08:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 02:11 run_atlas
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas       105 Oct 12 02:11 job.xml
[2025-10-12 04:08:03] -rw-r--r-- 2 boincer umatlas 223809058 Oct 12 02:11 EVNT.46676267._003105.pool.root.1
[2025-10-12 04:08:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:11 start_atlas.sh
[2025-10-12 04:08:03] drwxrwx--x 2 boincer umatlas      4096 Oct 12 02:11 shared
[2025-10-12 04:08:03] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 02:11 input.tar.gz
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas         0 Oct 12 02:11 boinc_lockfile
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 02:11 pandaJob.out
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas    975528 Oct 12 02:11 agis_schedconf.cvmfs.json
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas   1560580 Oct 12 02:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:08:03] drwx------ 5 boincer umatlas      4096 Oct 12 02:11 pilot3
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 04:04 init_data.xml
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas 197791384 Oct 12 04:06 HITS.46676269._067935.pool.root.1
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas      1050 Oct 12 04:06 memory_monitor_summary.json
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas       529 Oct 12 04:07 boinc_task_state.xml
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas    357814 Oct 12 04:07 log.46676269._067935.job.log.tgz.1
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas      7847 Oct 12 04:07 heartbeat.json
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas        95 Oct 12 04:07 pilot_heartbeat.json
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas        27 Oct 12 04:07 wrapper_checkpoint.txt
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 04:07 boinc_mmap_file
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas      4818 Oct 12 04:08 pilotlog.txt
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas    978789 Oct 12 04:08 log.46676269._067935.job.log.1
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas       357 Oct 12 04:08 output.list
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas       620 Oct 12 04:08 runtime_log
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas   1351680 Oct 12 04:08 result.tar.gz
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 04:08 runtime_log.err
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas       658 Oct 12 04:08 E1KNDmSJzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt6hNDmYpXH3m.diag
[2025-10-12 04:08:03] -rw-r--r-- 1 boincer umatlas     20838 Oct 12 04:08 stderr.txt
[2025-10-12 04:08:03] HITS file was successfully produced:
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas 197791384 Oct 12 04:06 shared/HITS.pool.root.1
[2025-10-12 04:08:03]  *** Contents of shared directory: ***
[2025-10-12 04:08:03] total 413616
[2025-10-12 04:08:03] -rw-r--r-- 2 boincer umatlas 223809058 Oct 12 02:11 ATLAS.root_0
[2025-10-12 04:08:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:11 start_atlas.sh
[2025-10-12 04:08:03] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 02:11 input.tar.gz
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas 197791384 Oct 12 04:06 HITS.pool.root.1
[2025-10-12 04:08:03] -rw------- 1 boincer umatlas   1351680 Oct 12 04:08 result.tar.gz
04:08:04 (27982): run_atlas exited; CPU time 51342.960362
04:08:04 (27982): called boinc_finish(0)

</stderr_txt>
]]>

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