Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 07:22:40 (19552): vboxwrapper version 26210
2025-10-12 07:22:40 (19552): BOINC client version: 7.22.2
2025-10-12 07:22:42 (19552): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-12 07:22:42 (19552): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 07:22:42 (19552): Create VM. (boinc_edab3822dd09ad59, slot#0)
2025-10-12 07:22:43 (19552): Setting Memory Size for VM. (4700MB)
2025-10-12 07:22:43 (19552): Setting CPU Count for VM. (7)
2025-10-12 07:22:43 (19552): Setting Chipset Options for VM.
2025-10-12 07:22:44 (19552): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 07:22:44 (19552): Setting Boot Options for VM.
2025-10-12 07:22:45 (19552): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 07:22:45 (19552): Enabling VM Network Access.
2025-10-12 07:22:45 (19552): Disabling USB Support for VM.
2025-10-12 07:22:46 (19552): Disabling COM Port Support for VM.
2025-10-12 07:22:46 (19552): Disabling LPT Port Support for VM.
2025-10-12 07:22:46 (19552): Disabling Audio Support for VM.
2025-10-12 07:22:47 (19552): Disabling Clipboard Support for VM.
2025-10-12 07:22:47 (19552): Disabling Drag and Drop Support for VM.
2025-10-12 07:22:47 (19552): Adding storage controller(s) to VM.
2025-10-12 07:22:48 (19552): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 07:22:50 (19552): Adding VirtualBox Guest Additions to VM.
2025-10-12 07:22:51 (19552): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 07:22:51 (19552): forwarding host port 51762 to guest port 80
2025-10-12 07:22:52 (19552): Enabling remote desktop for VM.
2025-10-12 07:22:52 (19552): Required extension pack not installed, remote desktop not enabled.
2025-10-12 07:22:52 (19552): Enabling shared directory for VM.
2025-10-12 07:22:53 (19552): Starting VM using VBoxManage interface. (boinc_edab3822dd09ad59, slot#0)
2025-10-12 07:23:04 (19552): Successfully started VM. (PID = '20228')
2025-10-12 07:23:04 (19552): Reporting VM Process ID to BOINC.
2025-10-12 07:23:04 (19552): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-12 07:23:04 (19552): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 07:23:04 (19552): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 07:23:04 (19552): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 07:23:04 (19552): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 07:23:04 (19552): Detected: Web Application Enabled (http://localhost:51762)
2025-10-12 07:23:04 (19552): Preference change detected
2025-10-12 07:23:04 (19552): Setting CPU throttle for VM. (75%)
2025-10-12 07:23:04 (19552): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 07:23:06 (19552): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 07:23:06 (19552): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 07:23:11 (19552): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 07:23:11 (19552): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 07:23:11 (19552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 07:23:26 (19552): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 07:23:26 (19552): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 07:23:58 (19552): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.000518 main     Log opened 2025-10-12T07:23:56.733572000Z
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.000924 main     OS Product: Linux
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.001063 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.001363 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.001597 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.001604 main     Process ID: 1318
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.001605 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 07:23:58 (19552): Guest Log: 00:00:00.005388 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 07:23:59 (19552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 07:23:59 (19552): Guest Log: [INFO] Mounting shared directory
2025-10-12 07:23:59 (19552): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 07:24:08 (19552): Guest Log: 00:00:10.014744 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 477 931 000ns (GuestNow=1 760 268 248 223 303 000 ns GuestLast=1 760 253 836 745 372 000 ns fSetTimeLastLoop=true )
2025-10-12 07:25:02 (19552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 07:25:02 (19552): Guest Log: [INFO] Detected branch: prod
2025-10-12 07:25:02 (19552): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 07:25:02 (19552): Guest Log: Copying input files
2025-10-12 07:25:10 (19552): Guest Log: Copied input files into RunAtlas.
2025-10-12 07:25:10 (19552): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 07:25:10 (19552): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 07:25:10 (19552): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 07:25:10 (19552): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 07:26:07 (19552): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 07:26:08 (19552): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 07:26:08 (19552): Guest Log: 2.6.3.0 1628 1 32132 151619 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 07:26:12 (19552): Guest Log: copied the webapp to /var/www
2025-10-12 07:26:12 (19552): Guest Log: ATHENA_PROC_NUMBER=7
2025-10-12 07:26:12 (19552): Guest Log: ATHENA_CORE_NUMBER=7
2025-10-12 07:26:13 (19552): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 07:26:13 (19552): Guest Log:  *** Starting ATLAS job. (PandaID=6839164203 taskID=46676269) ***
2025-10-12 07:38:45 (19552): Guest Log:  *** Job finished ***
2025-10-12 07:38:45 (19552): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:08,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:08,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:38,245 | INFO     | [monitor] cgroup control has ended
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:39,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686713464640)>', '<ExcThread(monitor, started 139685674342144)>']
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:39,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:39,899 | INFO     | [monitor] control thread has ended
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,278 | INFO     | all workflow threads have been joined
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,279 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,280 | INFO     | traces error code: 0
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,667 [wrapper] ==== pilot stdout END ====
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,693 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,714 [wrapper] pilotpid: 6072
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,737 [wrapper] Pilot exit status: 0
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,868 [wrapper] pandaids: 6839164203
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:44,982 [wrapper] cleanup supervisor_pilot  6078 6073
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:45,002 [wrapper] Test setup, not cleaning
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:45,020 [wrapper] apfmon messages muted
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:45,036 [wrapper] ==== wrapper stdout END ====
2025-10-12 07:38:45 (19552): Guest Log: 2025-10-12 11:38:45,052 [wrapper] ==== wrapper stderr END ====
2025-10-12 07:38:45 (19552): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 07:38:45 (19552): Guest Log:     "exeErrorCode": 65,
2025-10-12 07:38:45 (19552): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-12 07:38:45 (19552): Guest Log:     "pilotErrorCode": 1305,
2025-10-12 07:38:45 (19552): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-12 07:38:45 (19552): Guest Log:  *** Listing of results directory ***
2025-10-12 07:38:45 (19552): Guest Log: total 4260
2025-10-12 07:38:45 (19552): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 12 00:05 pilot3.tar.gz
2025-10-12 07:38:45 (19552): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 12 00:33 queuedata.json
2025-10-12 07:38:45 (19552): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 12 00:35 runpilot2-wrapper.sh
2025-10-12 07:38:45 (19552): Guest Log: -rwxr-xr-x. 1 atlas atlas    6103 Oct 12 11:25 init_data.xml
2025-10-12 07:38:45 (19552): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 12 11:25 start_atlas.sh
2025-10-12 07:38:45 (19552): Guest Log: -rwxr-xr-x. 1 atlas atlas  569684 Oct 12 11:25 input.tar.gz
2025-10-12 07:38:45 (19552): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 12 11:25 EVNT.46676267._003096.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 07:38:45 (19552): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Oct 12 11:26 pandaJob.out
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas  975520 Oct 12 11:27 agis_schedconf.cvmfs.json
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas 1560580 Oct 12 11:27 agis_ddmendpoints.agis.ALL.json
2025-10-12 07:38:45 (19552): Guest Log: drwx------. 5 atlas atlas    4096 Oct 12 11:27 pilot3
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas   53695 Oct 12 11:35 log.46676269._067792.job.log.tgz.1
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas    8184 Oct 12 11:37 heartbeat.json
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas      95 Oct 12 11:37 pilot_heartbeat.json
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas    4805 Oct 12 11:38 pilotlog.txt
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas  213586 Oct 12 11:38 log.46676269._067792.job.log.1
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas     188 Oct 12 11:38 output.list
2025-10-12 07:38:45 (19552): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 12 11:38 runtime_log
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas  286720 Oct 12 11:38 result.tar.gz
2025-10-12 07:38:45 (19552): Guest Log: -rw-------. 1 atlas atlas     647 Oct 12 11:38 WV2NDmPEzR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmosSMDmRHNgwn.diag
2025-10-12 07:38:45 (19552): Guest Log: -rw-r--r--. 1 atlas atlas    8492 Oct 12 11:38 runtime_log.err
2025-10-12 07:38:45 (19552): Guest Log: Looking for outputfile HITS.46676269._067792.pool.root.1
2025-10-12 07:38:45 (19552): Guest Log: No HITS file was produced
2025-10-12 07:38:45 (19552): Guest Log: Successfully finished the ATLAS job!
2025-10-12 07:38:45 (19552): Guest Log: Copying the results back to the shared directory!
2025-10-12 07:38:46 (19552): Guest Log:  *** Contents of shared directory: ***
2025-10-12 07:38:46 (19552): Guest Log: total 215416
2025-10-12 07:38:46 (19552): Guest Log: -rwxrwxrwx. 1 root root 219698288 Oct 12 11:22 ATLAS.root_0
2025-10-12 07:38:46 (19552): Guest Log: -rwxrwxrwx. 1 root root      6103 Oct 12 11:22 init_data.xml
2025-10-12 07:38:46 (19552): Guest Log: -rwxrwxrwx. 1 root root    569684 Oct 12 06:24 input.tar.gz
2025-10-12 07:38:46 (19552): Guest Log: -rwxrwxrwx. 1 root root    286720 Oct 12 11:38 result.tar.gz
2025-10-12 07:38:46 (19552): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 06:24 start_atlas.sh
2025-10-12 07:38:46 (19552): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 07:38:46 (19552): VM Completion File Detected.
2025-10-12 07:38:46 (19552): Powering off VM.
2025-10-12 07:38:48 (19552): Successfully stopped VM.
2025-10-12 07:38:48 (19552): Deregistering VM. (boinc_edab3822dd09ad59, slot#0)
2025-10-12 07:38:48 (19552): Removing network bandwidth throttle group from VM.
2025-10-12 07:38:48 (19552): Removing VM from VirtualBox.
2025-10-12 07:38:54 (19552): called boinc_finish(0)

</stderr_txt>
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