Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:48:14 (3156490): wrapper (7.7.26015): starting
01:48:14 (3156490): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 01:48:14] Arguments: --nthreads 8
[2025-10-12 01:48:14] Threads: 8
[2025-10-12 01:48:14] Checking for CVMFS
[2025-10-12 01:48:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:48:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:48:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:48:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:48:14] 2.13.2.0 4298 23950 221728 151609 1 196 23629277 32935936 4322 16776704 0 69020447 99.721 51566602 29846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 01:48:14] CVMFS is ok
[2025-10-12 01:48:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:48:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:48:14] Further information can be found at the LHC@home message board.
[2025-10-12 01:48:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:48:14] Checking for apptainer binary...
[2025-10-12 01:48:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:48:14] Running /usr/bin/apptainer --version
[2025-10-12 01:48:14] apptainer version 1.4.3-1.el9
[2025-10-12 01:48:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:48:14] c-8-24.aglt2.org
[2025-10-12 01:48:14] apptainer works
[2025-10-12 01:48:14] Set ATHENA_PROC_NUMBER=8
[2025-10-12 01:48:14] Set ATHENA_CORE_NUMBER=8
[2025-10-12 01:48:14] Starting ATLAS job with PandaID=6838989695
[2025-10-12 01:48:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:35:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:35:41] 2025-10-12 07:35:02,208 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:35:41] 2025-10-12 07:35:02,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:35:41] 2025-10-12 07:35:02,211 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:35:41] 2025-10-12 07:35:02,212 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,212 | INFO     | sum of deviations: 5164232001.000003
[2025-10-12 03:35:41] 2025-10-12 07:35:02,212 | INFO     | mean x: 1760251301.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,212 | INFO     | mean y: 2140787.3714285716
[2025-10-12 03:35:41] 2025-10-12 07:35:02,213 | INFO     | -- intersect: -25324260912.698406
[2025-10-12 03:35:41] 2025-10-12 07:35:02,213 | INFO     | intersect: -25324260912.698406
[2025-10-12 03:35:41] 2025-10-12 07:35:02,213 | INFO     | chi2: 2.2837791813236077
[2025-10-12 03:35:41] 2025-10-12 07:35:02,213 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,214 | INFO     | sum of deviations: 11639440530.5
[2025-10-12 03:35:41] 2025-10-12 07:35:02,214 | INFO     | mean x: 1760251148.5
[2025-10-12 03:35:41] 2025-10-12 07:35:02,214 | INFO     | mean y: 2160276.73
[2025-10-12 03:35:41] 2025-10-12 07:35:02,214 | INFO     | -- intersect: -66078100729.892265
[2025-10-12 03:35:41] 2025-10-12 07:35:02,214 | INFO     | intersect: -66078100729.892265
[2025-10-12 03:35:41] 2025-10-12 07:35:02,215 | INFO     | chi2: 1.531072999921805
[2025-10-12 03:35:41] 2025-10-12 07:35:02,215 | INFO     | current chi2=1.531072999921805 (change=32.95879862454817 %)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,215 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,216 | INFO     | sum of deviations: 11069202008.000002
[2025-10-12 03:35:41] 2025-10-12 07:35:02,216 | INFO     | mean x: 1760250996.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,216 | INFO     | mean y: 2158280.6210526316
[2025-10-12 03:35:41] 2025-10-12 07:35:02,216 | INFO     | -- intersect: -73295448698.63445
[2025-10-12 03:35:41] 2025-10-12 07:35:02,216 | INFO     | intersect: -73295448698.63445
[2025-10-12 03:35:41] 2025-10-12 07:35:02,216 | INFO     | chi2: 1.533475616610522
[2025-10-12 03:35:41] 2025-10-12 07:35:02,217 | INFO     | current chi2=1.533475616610522 (change=-0.1569237187802086 %)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,217 | INFO     | right removable region: 94
[2025-10-12 03:35:41] 2025-10-12 07:35:02,217 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,217 | INFO     | sum of deviations: -8958764542.5
[2025-10-12 03:35:41] 2025-10-12 07:35:02,218 | INFO     | mean x: 1760251453.5
[2025-10-12 03:35:41] 2025-10-12 07:35:02,218 | INFO     | mean y: 2184000.33
[2025-10-12 03:35:41] 2025-10-12 07:35:02,218 | INFO     | -- intersect: 50863529121.67327
[2025-10-12 03:35:41] 2025-10-12 07:35:02,218 | INFO     | intersect: 50863529121.67327
[2025-10-12 03:35:41] 2025-10-12 07:35:02,218 | INFO     | chi2: 0.8424763704255108
[2025-10-12 03:35:41] 2025-10-12 07:35:02,218 | INFO     | current chi2=0.8424763704255108 (change=63.11042778062118 %)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,219 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,219 | INFO     | sum of deviations: -7268716018.999999
[2025-10-12 03:35:41] 2025-10-12 07:35:02,219 | INFO     | mean x: 1760251606.0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,219 | INFO     | mean y: 2178129.136842105
[2025-10-12 03:35:41] 2025-10-12 07:35:02,220 | INFO     | -- intersect: 48133892976.29783
[2025-10-12 03:35:41] 2025-10-12 07:35:02,220 | INFO     | intersect: 48133892976.29783
[2025-10-12 03:35:41] 2025-10-12 07:35:02,220 | INFO     | chi2: 0.8374998727509969
[2025-10-12 03:35:41] 2025-10-12 07:35:02,220 | INFO     | current chi2=0.8374998727509969 (change=0.5906987838721728 %)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,220 | INFO     | left removable region: 20
[2025-10-12 03:35:41] 2025-10-12 07:35:02,221 | INFO     | sum of square deviations: 125630262.5
[2025-10-12 03:35:41] 2025-10-12 07:35:02,221 | INFO     | sum of deviations: 1291568768.5000017
[2025-10-12 03:35:41] 2025-10-12 07:35:02,221 | INFO     | mean x: 1760251575.5
[2025-10-12 03:35:41] 2025-10-12 07:35:02,221 | INFO     | mean y: 2191382.2837837837
[2025-10-12 03:35:41] 2025-10-12 07:35:02,221 | INFO     | -- intersect: -18094451213.036137
[2025-10-12 03:35:41] 2025-10-12 07:35:02,221 | INFO     | intersect: -18094451213.036137
[2025-10-12 03:35:41] 2025-10-12 07:35:02,222 | INFO     | chi2: 0.009175755426163404
[2025-10-12 03:35:41] 2025-10-12 07:35:02,222 | INFO     | -- intersect: -18094451213.036137
[2025-10-12 03:35:41] 2025-10-12 07:35:02,222 | INFO     | current memory leak: 10.28 B/s (using 74 data points, chi2=0.01)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,222 | INFO     | could have reported an average CPU frequency of 2745 MHz (7 samples)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | ..............................
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . Timing measurements:
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . get job = 0 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . initial setup = 2 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . payload setup = 5 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . stage-in = 0 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . payload execution = 6366 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . stage-out = 0 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,223 | INFO     | . log creation = 0 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,224 | INFO     | ..............................
[2025-10-12 03:35:41] 2025-10-12 07:35:02,329 | INFO     | 
[2025-10-12 03:35:41] 2025-10-12 07:35:02,329 | INFO     | job summary report
[2025-10-12 03:35:41] 2025-10-12 07:35:02,329 | INFO     | --------------------------------------------------
[2025-10-12 03:35:41] 2025-10-12 07:35:02,329 | INFO     | PanDA job id: 6838989695
[2025-10-12 03:35:41] 2025-10-12 07:35:02,329 | INFO     | task id: 46676269
[2025-10-12 03:35:41] 2025-10-12 07:35:02,329 | INFO     | errors: (none)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | pilot state: finished 
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | transexitcode: 0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | exeerrorcode: 0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | exeerrordiag: 
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | exitcode: 0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | exitmsg: OK
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | cpuconsumptiontime: 46892 s
[2025-10-12 03:35:41] 2025-10-12 07:35:02,330 | INFO     | nevents: 400
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | neventsw: 0
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | pid: 3167112
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | pgrp: 3167112
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | corecount: 8
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | event service: False
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 6375: 2376257, 6376: 2385255, 6378: 2385439, 6382: 2385633}
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | --------------------------------------------------
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | 
[2025-10-12 03:35:41] 2025-10-12 07:35:02,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 03:35:41] 2025-10-12 07:35:02,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:35:41] 2025-10-12 07:35:02,351 | INFO     | job 6838989695 has completed (purged errors)
[2025-10-12 03:35:41] 2025-10-12 07:35:02,351 | INFO     | overall cleanup function is called
[2025-10-12 03:35:41] 2025-10-12 07:35:03,359 | INFO     | --- collectZombieJob: --- 10, [3167112]
[2025-10-12 03:35:41] 2025-10-12 07:35:03,359 | INFO     | zombie collector waiting for pid 3167112
[2025-10-12 03:35:41] 2025-10-12 07:35:03,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:35:41] 2025-10-12 07:35:03,359 | INFO     | collected zombie processes
[2025-10-12 03:35:41] 2025-10-12 07:35:03,359 | INFO     | will attempt to kill all subprocesses of pid=3167112
[2025-10-12 03:35:41] 2025-10-12 07:35:03,618 | INFO     | process IDs to be killed: [3167112] (in reverse order)
[2025-10-12 03:35:41] 2025-10-12 07:35:03,689 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:35:41] 2025-10-12 07:35:03,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:35:41] 2025-10-12 07:35:03,697 | INFO     | did not find any defunct processes belonging to 3167112
[2025-10-12 03:35:41] 2025-10-12 07:35:03,704 | INFO     | did not find any defunct processes belonging to 3167112
[2025-10-12 03:35:41] 2025-10-12 07:35:03,704 | INFO     | ready for new job
[2025-10-12 03:35:41] 2025-10-12 07:35:03,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:35:41] 2025-10-12 07:35:03,706 | INFO     | ***************************************
[2025-10-12 03:35:41] 2025-10-12 07:35:03,706 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:35:41] 2025-10-12 07:35:03,706 | INFO     | ***************************************
[2025-10-12 03:35:41] 2025-10-12 07:35:03,707 | INFO     | 
[2025-10-12 03:35:41] 2025-10-12 07:35:03,720 | INFO     | architecture information:
[2025-10-12 03:35:41] 2025-10-12 07:35:03,721 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:35:41] 2025-10-12 07:35:03,735 | INFO     | cat /etc/os-release:
[2025-10-12 03:35:41] NAME="CentOS Linux"
[2025-10-12 03:35:41] VERSION="7 (Core)"
[2025-10-12 03:35:41] ID="centos"
[2025-10-12 03:35:41] ID_LIKE="rhel fedora"
[2025-10-12 03:35:41] VERSION_ID="7"
[2025-10-12 03:35:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:35:41] ANSI_COLOR="0;31"
[2025-10-12 03:35:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:35:41] HOME_URL="https://www.centos.org/"
[2025-10-12 03:35:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:35:41] 
[2025-10-12 03:35:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:35:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:35:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:35:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:35:41] 
[2025-10-12 03:35:41] 2025-10-12 07:35:03,736 | INFO     | ***************************************
[2025-10-12 03:35:41] 2025-10-12 07:35:04,239 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 03:35:41] 2025-10-12 07:35:04,254 | INFO     | sufficient remaining disk space (74165780480 B)
[2025-10-12 03:35:41] 2025-10-12 07:35:04,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:35:41] 2025-10-12 07:35:04,255 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:35:41] 2025-10-12 07:35:04,255 | INFO     | update_server=False
[2025-10-12 03:35:41] 2025-10-12 07:35:04,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:35:41] 2025-10-12 07:35:04,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:35:41] 2025-10-12 07:35:04,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:35:41] 2025-10-12 07:35:04,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:35:41] 2025-10-12 07:35:04,256 | INFO     | aborting loop
[2025-10-12 03:35:41] 2025-10-12 07:35:04,367 | INFO     | all data control threads have been joined
[2025-10-12 03:35:41] 2025-10-12 07:35:04,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:35:41] 2025-10-12 07:35:05,089 | INFO     | all payload control threads have been joined
[2025-10-12 03:35:41] 2025-10-12 07:35:05,259 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,260 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,261 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,373 | INFO     | [data] control thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,499 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,519 | INFO     | all job control threads have been joined
[2025-10-12 03:35:41] 2025-10-12 07:35:05,550 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,977 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:05,989 | INFO     | [job] validate thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:06,094 | INFO     | [payload] control thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:06,261 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:06,364 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:06,378 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:06,440 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:06,525 | INFO     | [job] control thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:08,720 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:15,093 | INFO     | job.realtimelogging is not enabled
[2025-10-12 03:35:41] 2025-10-12 07:35:16,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:35:41] 2025-10-12 07:35:34,590 | INFO     | PID=3160167 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:35:41] 2025-10-12 07:35:34,591 | INFO     | .. there are 6 such processes running
[2025-10-12 03:35:41] 2025-10-12 07:35:34,592 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:35:41] 2025-10-12 07:35:34,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:35:41] 2025-10-12 07:35:34,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:35:41] 2025-10-12 07:35:35,189 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:35:41] 2025-10-12 07:35:36,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480000296768)>', '<ExcThread(monitor, started 140479354091264)>']
[2025-10-12 03:35:41] 2025-10-12 07:35:36,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:35:41] 2025-10-12 07:35:36,602 | INFO     | [monitor] control thread has ended
[2025-10-12 03:35:41] 2025-10-12 07:35:41,369 | INFO     | all workflow threads have been joined
[2025-10-12 03:35:41] 2025-10-12 07:35:41,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:35:41] 2025-10-12 07:35:41,370 | INFO     | traces error code: 0
[2025-10-12 03:35:41] 2025-10-12 07:35:41,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:35:41] 2025-10-12 07:35:41,488 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:35:41] 2025-10-12 07:35:41,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:35:41] 2025-10-12 07:35:41,492 [wrapper] pilotpid: 3160167
[2025-10-12 03:35:41] 2025-10-12 07:35:41,494 [wrapper] Pilot exit status: 0
[2025-10-12 03:35:41] 2025-10-12 07:35:41,502 [wrapper] pandaids: 6838989695
[2025-10-12 03:35:41] 2025-10-12 07:35:41,546 [wrapper] cleanup supervisor_pilot 3426567 3160168
[2025-10-12 03:35:41] 2025-10-12 07:35:41,548 [wrapper] Test setup, not cleaning
[2025-10-12 03:35:41] 2025-10-12 07:35:41,551 [wrapper] apfmon messages muted
[2025-10-12 03:35:41] 2025-10-12 07:35:41,553 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:35:41] 2025-10-12 07:35:41,555 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:35:41]  *** Error codes and diagnostics ***
[2025-10-12 03:35:41]     "exeErrorCode": 0,
[2025-10-12 03:35:41]     "exeErrorDiag": "",
[2025-10-12 03:35:41]     "pilotErrorCode": 0,
[2025-10-12 03:35:41]     "pilotErrorDiag": "",
[2025-10-12 03:35:41]  *** Listing of results directory ***
[2025-10-12 03:35:41] total 418288
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 17:39 pilot3.tar.gz
[2025-10-12 03:35:41] -rwx------. 1 boincer umatlas     36292 Oct 11 17:57 runpilot2-wrapper.sh
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 17:57 queuedata.json
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas       100 Oct 12 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:35:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 01:48 run_atlas
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas       105 Oct 12 01:48 job.xml
[2025-10-12 03:35:41] -rw-r--r--. 2 boincer umatlas 222848042 Oct 12 01:48 EVNT.46676267._002635.pool.root.1
[2025-10-12 03:35:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 01:48 start_atlas.sh
[2025-10-12 03:35:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 01:48 shared
[2025-10-12 03:35:41] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 01:48 input.tar.gz
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas         0 Oct 12 01:48 boinc_lockfile
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 01:48 pandaJob.out
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas    975528 Oct 12 01:48 agis_schedconf.cvmfs.json
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas   1560580 Oct 12 01:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:35:41] drwx------. 5 boincer umatlas      4096 Oct 12 01:48 pilot3
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 03:28 init_data.xml
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas 198995280 Oct 12 03:34 HITS.46676269._065603.pool.root.1
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas       529 Oct 12 03:34 boinc_task_state.xml
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas      1032 Oct 12 03:34 memory_monitor_summary.json
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas    362811 Oct 12 03:34 log.46676269._065603.job.log.tgz.1
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas      7808 Oct 12 03:35 heartbeat.json
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas        95 Oct 12 03:35 pilot_heartbeat.json
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas        27 Oct 12 03:35 wrapper_checkpoint.txt
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas      4895 Oct 12 03:35 pilotlog.txt
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas    929707 Oct 12 03:35 log.46676269._065603.job.log.1
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas       357 Oct 12 03:35 output.list
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 03:35 boinc_mmap_file
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas       620 Oct 12 03:35 runtime_log
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas   1310720 Oct 12 03:35 result.tar.gz
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas       650 Oct 12 03:35 VQbNDmelwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGfSMDmwRhLwm.diag
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas      8693 Oct 12 03:35 runtime_log.err
[2025-10-12 03:35:41] -rw-r--r--. 1 boincer umatlas     20873 Oct 12 03:35 stderr.txt
[2025-10-12 03:35:41] HITS file was successfully produced:
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas 198995280 Oct 12 03:34 shared/HITS.pool.root.1
[2025-10-12 03:35:41]  *** Contents of shared directory: ***
[2025-10-12 03:35:41] total 413820
[2025-10-12 03:35:41] -rw-r--r--. 2 boincer umatlas 222848042 Oct 12 01:48 ATLAS.root_0
[2025-10-12 03:35:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 01:48 start_atlas.sh
[2025-10-12 03:35:41] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 01:48 input.tar.gz
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas 198995280 Oct 12 03:34 HITS.pool.root.1
[2025-10-12 03:35:41] -rw-------. 1 boincer umatlas   1310720 Oct 12 03:35 result.tar.gz
03:35:43 (3156490): run_atlas exited; CPU time 47052.904093
03:35:43 (3156490): called boinc_finish(0)

</stderr_txt>
]]>

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