Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:13:34 (29313): wrapper (7.7.26015): starting
02:13:34 (29313): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 02:13:34] Arguments: --nthreads 8
[2025-10-12 02:13:34] Threads: 8
[2025-10-12 02:13:34] Checking for CVMFS
[2025-10-12 02:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:13:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:13:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:13:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:13:35] 2.11.2.0 1598 215828 127396 151610 1 56 20160311 20275201 917 130560 1 220602484 99.992 11691033 11166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:13:35] CVMFS is ok
[2025-10-12 02:13:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:13:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:13:35] Further information can be found at the LHC@home message board.
[2025-10-12 02:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:13:35] Checking for apptainer binary...
[2025-10-12 02:13:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:13:35] Running /usr/bin/apptainer --version
[2025-10-12 02:13:35] apptainer version 1.3.2-1.el7
[2025-10-12 02:13:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:13:35] c-205-36.aglt2.org
[2025-10-12 02:13:35] apptainer works
[2025-10-12 02:13:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 02:13:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 02:13:35] Starting ATLAS job with PandaID=6838989102
[2025-10-12 02:13:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:21:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:21:01]  status=None
[2025-10-12 03:21:01]  status_code=0
[2025-10-12 03:21:01]  storage_token=
[2025-10-12 03:21:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838989102/log.46676269._065417.job.log.tgz.1
[2025-10-12 03:21:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/fc/log.46676269._065417.job.log.tgz.1
[2025-10-12 03:21:01]  workdir=None
[2025-10-12 03:21:01] ]
[2025-10-12 03:21:01] 2025-10-12 07:20:21,133 | INFO     | transferring file log.46676269._065417.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838989102/log.46676269._065417.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 03:21:01] 2025-10-12 07:20:21,133 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838989102/log.46676269._065417.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._065417.job
[2025-10-12 03:21:01] 2025-10-12 07:20:21,156 | INFO     | adding to output.list: log.46676269._065417.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/fc/log.46676269._065417.job.log.tg
[2025-10-12 03:21:01] 2025-10-12 07:20:21,157 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 03:21:01] 2025-10-12 07:20:21,157 | INFO     | summary of transferred files:
[2025-10-12 03:21:01] 2025-10-12 07:20:21,157 | INFO     |  -- lfn=log.46676269._065417.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 03:21:01] 2025-10-12 07:20:21,157 | INFO     | stage-out finished correctly
[2025-10-12 03:21:01] 2025-10-12 07:20:21,402 | INFO     | time since job start (3993s) is within the limit (172800.0s)
[2025-10-12 03:21:01] 2025-10-12 07:20:22,325 | WARNING  | process 7185 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 03:21:01] 2025-10-12 07:20:22,325 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838989102/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:21:01] 2025-10-12 07:20:22,402 | INFO     | number of running child processes to parent process 7185: 1
[2025-10-12 03:21:01] 2025-10-12 07:20:22,402 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:21:01] 2025-10-12 07:20:23,407 | INFO     | time since job start (3995s) is within the limit (172800.0s)
[2025-10-12 03:21:01] 2025-10-12 07:20:24,150 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 03:21:01] 2025-10-12 07:20:24,275 | INFO     | job 6838989102 has state=finished
[2025-10-12 03:21:01] 2025-10-12 07:20:24,276 | INFO     | preparing for final server update for job 6838989102 in state='finished'
[2025-10-12 03:21:01] 2025-10-12 07:20:24,276 | INFO     | this job has now completed (state=finished)
[2025-10-12 03:21:01] 2025-10-12 07:20:24,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 03:21:01] 2025-10-12 07:20:24,277 | INFO     | log transfer has been attempted: DONE
[2025-10-12 03:21:01] 2025-10-12 07:20:24,277 | INFO     | job 6838989102 has finished - writing final server update
[2025-10-12 03:21:01] 2025-10-12 07:20:24,277 | INFO     | total number of processed events: 400 (read)
[2025-10-12 03:21:01] 2025-10-12 07:20:24,278 | INFO     | executing command: lscpu
[2025-10-12 03:21:01] 2025-10-12 07:20:24,312 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 03:21:01] 2025-10-12 07:20:24,905 | INFO     | monitor loop #298: job 0:6838989102 is in state 'finished'
[2025-10-12 03:21:01] 2025-10-12 07:20:24,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 03:21:01] 2025-10-12 07:20:25,413 | INFO     | time since job start (3997s) is within the limit (172800.0s)
[2025-10-12 03:21:01] 2025-10-12 07:20:27,408 | INFO     | monitor loop #299: job 0:6838989102 is in state 'finished'
[2025-10-12 03:21:01] 2025-10-12 07:20:27,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 03:21:01] 2025-10-12 07:20:27,417 | INFO     | time since job start (3999s) is within the limit (172800.0s)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,564 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 03:21:01] 2025-10-12 07:20:28,569 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2079.4735625
[2025-10-12 03:21:01] 2025-10-12 07:20:28,573 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838989102/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,574 | INFO     | extracted standard info from prmon json
[2025-10-12 03:21:01] 2025-10-12 07:20:28,574 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:21:01] 2025-10-12 07:20:28,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:21:01] 2025-10-12 07:20:28,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:21:01] 2025-10-12 07:20:28,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:21:01] 2025-10-12 07:20:28,577 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:21:01] 2025-10-12 07:20:28,578 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 03:21:01] 2025-10-12 07:20:28,578 | INFO     | sum of deviations: -817292426.5
[2025-10-12 03:21:01] 2025-10-12 07:20:28,578 | INFO     | mean x: 1760251696.5
[2025-10-12 03:21:01] 2025-10-12 07:20:28,578 | INFO     | mean y: 2566774.327586207
[2025-10-12 03:21:01] 2025-10-12 07:20:28,578 | INFO     | -- intersect: 23788432407.736767
[2025-10-12 03:21:01] 2025-10-12 07:20:28,578 | INFO     | intersect: 23788432407.736767
[2025-10-12 03:21:01] 2025-10-12 07:20:28,579 | INFO     | chi2: 0.0021769063173732667
[2025-10-12 03:21:01] 2025-10-12 07:20:28,579 | INFO     | -- intersect: 23788432407.736767
[2025-10-12 03:21:01] 2025-10-12 07:20:28,579 | INFO     | current memory leak: -13.51 B/s (using 58 data points, chi2=0.00)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,579 | INFO     | could have reported an average CPU frequency of 2270 MHz (6 samples)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | ..............................
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . Timing measurements:
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . get job = 0 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . initial setup = 2 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . payload setup = 6 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . stage-in = 0 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . payload execution = 3966 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . stage-out = 0 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,580 | INFO     | . log creation = 0 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,581 | INFO     | ..............................
[2025-10-12 03:21:01] 2025-10-12 07:20:28,664 | INFO     | 
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | job summary report
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | --------------------------------------------------
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | PanDA job id: 6838989102
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | task id: 46676269
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | errors: (none)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | pilot state: finished 
[2025-10-12 03:21:01] 2025-10-12 07:20:28,665 | INFO     | transexitcode: 0
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | exeerrorcode: 0
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | exeerrordiag: 
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | exitcode: 0
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | exitmsg: OK
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | cpuconsumptiontime: 29291 s
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | nevents: 400
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | neventsw: 0
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | pid: 7185
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | pgrp: 7185
[2025-10-12 03:21:01] 2025-10-12 07:20:28,666 | INFO     | corecount: 8
[2025-10-12 03:21:01] 2025-10-12 07:20:28,667 | INFO     | event service: False
[2025-10-12 03:21:01] 2025-10-12 07:20:28,667 | INFO     | sizes: {0: 2348685, 1: 2348884, 5: 2349146, 11: 2349202, 3976: 2375101, 3977: 2384099, 3980: 2384283, 3985: 2384477}
[2025-10-12 03:21:01] 2025-10-12 07:20:28,667 | INFO     | --------------------------------------------------
[2025-10-12 03:21:01] 2025-10-12 07:20:28,667 | INFO     | 
[2025-10-12 03:21:01] 2025-10-12 07:20:28,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 03:21:01] 2025-10-12 07:20:28,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:21:01] 2025-10-12 07:20:28,689 | INFO     | job 6838989102 has completed (purged errors)
[2025-10-12 03:21:01] 2025-10-12 07:20:28,690 | INFO     | overall cleanup function is called
[2025-10-12 03:21:01] 2025-10-12 07:20:29,697 | INFO     | --- collectZombieJob: --- 10, [7185]
[2025-10-12 03:21:01] 2025-10-12 07:20:29,697 | INFO     | zombie collector waiting for pid 7185
[2025-10-12 03:21:01] 2025-10-12 07:20:29,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:21:01] 2025-10-12 07:20:29,698 | INFO     | collected zombie processes
[2025-10-12 03:21:01] 2025-10-12 07:20:29,698 | INFO     | will attempt to kill all subprocesses of pid=7185
[2025-10-12 03:21:01] 2025-10-12 07:20:29,773 | INFO     | process IDs to be killed: [7185] (in reverse order)
[2025-10-12 03:21:01] 2025-10-12 07:20:29,817 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:21:01] 2025-10-12 07:20:29,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:21:01] 2025-10-12 07:20:29,821 | INFO     | did not find any defunct processes belonging to 7185
[2025-10-12 03:21:01] 2025-10-12 07:20:29,825 | INFO     | did not find any defunct processes belonging to 7185
[2025-10-12 03:21:01] 2025-10-12 07:20:29,825 | INFO     | ready for new job
[2025-10-12 03:21:01] 2025-10-12 07:20:29,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:21:01] 2025-10-12 07:20:29,827 | INFO     | ***************************************
[2025-10-12 03:21:01] 2025-10-12 07:20:29,827 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:21:01] 2025-10-12 07:20:29,827 | INFO     | ***************************************
[2025-10-12 03:21:01] 2025-10-12 07:20:29,827 | INFO     | 
[2025-10-12 03:21:01] 2025-10-12 07:20:29,829 | INFO     | architecture information:
[2025-10-12 03:21:01] 2025-10-12 07:20:29,829 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:21:01] 2025-10-12 07:20:29,844 | INFO     | cat /etc/os-release:
[2025-10-12 03:21:01] NAME="CentOS Linux"
[2025-10-12 03:21:01] VERSION="7 (Core)"
[2025-10-12 03:21:01] ID="centos"
[2025-10-12 03:21:01] ID_LIKE="rhel fedora"
[2025-10-12 03:21:01] VERSION_ID="7"
[2025-10-12 03:21:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:21:01] ANSI_COLOR="0;31"
[2025-10-12 03:21:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:21:01] HOME_URL="https://www.centos.org/"
[2025-10-12 03:21:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:21:01] 
[2025-10-12 03:21:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:21:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:21:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:21:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:21:01] 
[2025-10-12 03:21:01] 2025-10-12 07:20:29,844 | INFO     | ***************************************
[2025-10-12 03:21:01] 2025-10-12 07:20:30,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 03:21:01] 2025-10-12 07:20:30,366 | INFO     | sufficient remaining disk space (32699842560 B)
[2025-10-12 03:21:01] 2025-10-12 07:20:30,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:21:01] 2025-10-12 07:20:30,367 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:21:01] 2025-10-12 07:20:30,367 | INFO     | update_server=False
[2025-10-12 03:21:01] 2025-10-12 07:20:30,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:21:01] 2025-10-12 07:20:30,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:21:01] 2025-10-12 07:20:30,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:21:01] 2025-10-12 07:20:30,371 | INFO     | all job control threads have been joined
[2025-10-12 03:21:01] 2025-10-12 07:20:30,874 | INFO     | all data control threads have been joined
[2025-10-12 03:21:01] 2025-10-12 07:20:30,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:21:01] 2025-10-12 07:20:30,916 | INFO     | aborting loop
[2025-10-12 03:21:01] 2025-10-12 07:20:31,201 | INFO     | all payload control threads have been joined
[2025-10-12 03:21:01] 2025-10-12 07:20:31,372 | INFO     | [job] control thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:31,373 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:31,374 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:31,548 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:31,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:21:01] 2025-10-12 07:20:31,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:31,879 | INFO     | [data] control thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:31,921 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,115 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,206 | INFO     | [payload] control thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,466 | INFO     | [job] validate thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,834 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,860 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:32,867 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:33,747 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:34,374 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:21:01] 2025-10-12 07:20:54,309 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:21:01] 2025-10-12 07:20:56,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139775033440064)>', '<ExcThread(monitor, started 139774425798400)>']
[2025-10-12 03:21:01] 2025-10-12 07:21:00,636 | INFO     | PID=605 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 03:21:01] 2025-10-12 07:21:00,636 | INFO     | .. there are 2 such processes running
[2025-10-12 03:21:01] 2025-10-12 07:21:00,637 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:21:01] 2025-10-12 07:21:00,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:21:01] 2025-10-12 07:21:00,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:21:01] 2025-10-12 07:21:00,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:21:01] 2025-10-12 07:21:00,637 | INFO     | [monitor] control thread has ended
[2025-10-12 03:21:01] 2025-10-12 07:21:01,087 | INFO     | all workflow threads have been joined
[2025-10-12 03:21:01] 2025-10-12 07:21:01,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:21:01] 2025-10-12 07:21:01,088 | INFO     | traces error code: 0
[2025-10-12 03:21:01] 2025-10-12 07:21:01,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:21:01] 2025-10-12 07:21:01,168 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:21:01] 2025-10-12 07:21:01,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:21:01] 2025-10-12 07:21:01,174 [wrapper] pilotpid: 605
[2025-10-12 03:21:01] 2025-10-12 07:21:01,178 [wrapper] Pilot exit status: 0
[2025-10-12 03:21:01] 2025-10-12 07:21:01,189 [wrapper] pandaids: 6838989102
[2025-10-12 03:21:01] 2025-10-12 07:21:01,230 [wrapper] cleanup supervisor_pilot 19358 606
[2025-10-12 03:21:01] 2025-10-12 07:21:01,234 [wrapper] Test setup, not cleaning
[2025-10-12 03:21:01] 2025-10-12 07:21:01,238 [wrapper] apfmon messages muted
[2025-10-12 03:21:01] 2025-10-12 07:21:01,241 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:21:01] 2025-10-12 07:21:01,245 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:21:01]  *** Error codes and diagnostics ***
[2025-10-12 03:21:01]     "exeErrorCode": 0,
[2025-10-12 03:21:01]     "exeErrorDiag": "",
[2025-10-12 03:21:01]     "pilotErrorCode": 0,
[2025-10-12 03:21:01]     "pilotErrorDiag": "",
[2025-10-12 03:21:01]  *** Listing of results directory ***
[2025-10-12 03:21:01] total 415468
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 17:39 pilot3.tar.gz
[2025-10-12 03:21:01] -rwx------ 1 boincer umatlas     36292 Oct 11 17:42 runpilot2-wrapper.sh
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:42 queuedata.json
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas       100 Oct 12 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:21:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 02:13 run_atlas
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas       105 Oct 12 02:13 job.xml
[2025-10-12 03:21:01] -rw-r--r-- 2 boincer umatlas 223591276 Oct 12 02:13 EVNT.46676267._002628.pool.root.1
[2025-10-12 03:21:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:13 start_atlas.sh
[2025-10-12 03:21:01] drwxrwx--x 2 boincer umatlas      4096 Oct 12 02:13 shared
[2025-10-12 03:21:01] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 02:13 input.tar.gz
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas         0 Oct 12 02:13 boinc_lockfile
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 02:13 pandaJob.out
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas    975528 Oct 12 02:13 agis_schedconf.cvmfs.json
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas   1560580 Oct 12 02:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:21:01] drwx------ 5 boincer umatlas      4096 Oct 12 02:13 pilot3
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas      6135 Oct 12 03:19 init_data.xml
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas 196120417 Oct 12 03:19 HITS.46676269._065417.pool.root.1
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas       529 Oct 12 03:19 boinc_task_state.xml
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas      1046 Oct 12 03:20 memory_monitor_summary.json
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas    314300 Oct 12 03:20 log.46676269._065417.job.log.tgz.1
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas      7834 Oct 12 03:20 heartbeat.json
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 03:20 boinc_mmap_file
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas        27 Oct 12 03:20 wrapper_checkpoint.txt
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas        95 Oct 12 03:21 pilot_heartbeat.json
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas      4819 Oct 12 03:21 pilotlog.txt
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas    599235 Oct 12 03:21 log.46676269._065417.job.log.1
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas       357 Oct 12 03:21 output.list
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas       620 Oct 12 03:21 runtime_log
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas    931840 Oct 12 03:21 result.tar.gz
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 03:21 runtime_log.err
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas       658 Oct 12 03:21 EqAODmxWwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbdSMDmArIyhm.diag
[2025-10-12 03:21:01] -rw-r--r-- 1 boincer umatlas     21989 Oct 12 03:21 stderr.txt
[2025-10-12 03:21:01] HITS file was successfully produced:
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas 196120417 Oct 12 03:19 shared/HITS.pool.root.1
[2025-10-12 03:21:01]  *** Contents of shared directory: ***
[2025-10-12 03:21:01] total 411368
[2025-10-12 03:21:01] -rw-r--r-- 2 boincer umatlas 223591276 Oct 12 02:13 ATLAS.root_0
[2025-10-12 03:21:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:13 start_atlas.sh
[2025-10-12 03:21:01] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 02:13 input.tar.gz
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas 196120417 Oct 12 03:19 HITS.pool.root.1
[2025-10-12 03:21:01] -rw------- 1 boincer umatlas    931840 Oct 12 03:21 result.tar.gz
03:21:02 (29313): run_atlas exited; CPU time 29291.060544
03:21:02 (29313): called boinc_finish(0)

</stderr_txt>
]]>

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