Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:20 (3824096): wrapper (7.7.26015): starting
12:40:20 (3824096): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 12:40:20] Arguments: --nthreads 4
[2025-10-13 12:40:20] Threads: 4
[2025-10-13 12:40:20] Checking for CVMFS
[2025-10-13 12:40:20] No cvmfs_config command found, will try listing directly
[2025-10-13 12:40:20] CVMFS is ok
[2025-10-13 12:40:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:40:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:40:20] Further information can be found at the LHC@home message board.
[2025-10-13 12:40:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:40:20] Checking for apptainer binary...
[2025-10-13 12:40:20] which: no apptainer in ((null))
[2025-10-13 12:40:20] apptainer is not installed, using version from CVMFS
[2025-10-13 12:40:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:40:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-10-13 12:40:20] apptainer works
[2025-10-13 12:40:20] Set ATHENA_PROC_NUMBER=4
[2025-10-13 12:40:20] Set ATHENA_CORE_NUMBER=4
[2025-10-13 12:40:20] Starting ATLAS job with PandaID=6839163111
[2025-10-13 12:40:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:08:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:08:31] 2025-10-13 13:54:08,413 | INFO     | time since job start (11618s) is within the limit (172800.0s)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,100 | INFO     | monitor loop #851: job 0:6839163111 is in state 'finished'
[2025-10-13 16:08:31] 2025-10-13 13:54:09,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,798 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 16:08:31] 2025-10-13 13:54:09,806 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2604.168200000001
[2025-10-13 16:08:31] 2025-10-13 13:54:09,814 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6839163111/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,815 | INFO     | extracted standard info from prmon json
[2025-10-13 16:08:31] 2025-10-13 13:54:09,815 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:08:31] 2025-10-13 13:54:09,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:08:31] 2025-10-13 13:54:09,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:08:31] 2025-10-13 13:54:09,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:08:31] 2025-10-13 13:54:09,820 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:08:31] 2025-10-13 13:54:09,820 | INFO     | sum of square deviations: 2126802667.5
[2025-10-13 16:08:31] 2025-10-13 13:54:09,822 | INFO     | sum of deviations: -11072801557.000004
[2025-10-13 16:08:31] 2025-10-13 13:54:09,822 | INFO     | mean x: 1760357820.5
[2025-10-13 16:08:31] 2025-10-13 13:54:09,822 | INFO     | mean y: 2362905.6842105263
[2025-10-13 16:08:31] 2025-10-13 13:54:09,822 | INFO     | -- intersect: 9167337688.521946
[2025-10-13 16:08:31] 2025-10-13 13:54:09,822 | INFO     | intersect: 9167337688.521946
[2025-10-13 16:08:31] 2025-10-13 13:54:09,823 | INFO     | chi2: 1.5497282508670898
[2025-10-13 16:08:31] 2025-10-13 13:54:09,823 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,825 | INFO     | sum of deviations: -10583718136.000008
[2025-10-13 16:08:31] 2025-10-13 13:54:09,825 | INFO     | mean x: 1760357668.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,825 | INFO     | mean y: 2363361.8864864865
[2025-10-13 16:08:31] 2025-10-13 13:54:09,825 | INFO     | -- intersect: 9492189635.173738
[2025-10-13 16:08:31] 2025-10-13 13:54:09,825 | INFO     | intersect: 9492189635.173738
[2025-10-13 16:08:31] 2025-10-13 13:54:09,826 | INFO     | chi2: 1.548720282695396
[2025-10-13 16:08:31] 2025-10-13 13:54:09,826 | INFO     | current chi2=1.548720282695396 (change=0.06504160785155177 %)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,826 | INFO     | right removable region: 184
[2025-10-13 16:08:31] 2025-10-13 13:54:09,826 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,828 | INFO     | sum of deviations: -32821602599.000004
[2025-10-13 16:08:31] 2025-10-13 13:54:09,828 | INFO     | mean x: 1760357973.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,828 | INFO     | mean y: 2382851.8
[2025-10-13 16:08:31] 2025-10-13 13:54:09,828 | INFO     | -- intersect: 29431677608.008904
[2025-10-13 16:08:31] 2025-10-13 13:54:09,828 | INFO     | intersect: 29431677608.008904
[2025-10-13 16:08:31] 2025-10-13 13:54:09,829 | INFO     | chi2: 0.2415609359571394
[2025-10-13 16:08:31] 2025-10-13 13:54:09,829 | INFO     | current chi2=0.2415609359571394 (change=84.41269068806203 %)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,829 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,830 | INFO     | sum of deviations: -26113066232.999996
[2025-10-13 16:08:31] 2025-10-13 13:54:09,831 | INFO     | mean x: 1760358125.5
[2025-10-13 16:08:31] 2025-10-13 13:54:09,831 | INFO     | mean y: 2376227.066666667
[2025-10-13 16:08:31] 2025-10-13 13:54:09,831 | INFO     | -- intersect: 25422424128.342613
[2025-10-13 16:08:31] 2025-10-13 13:54:09,831 | INFO     | intersect: 25422424128.342613
[2025-10-13 16:08:31] 2025-10-13 13:54:09,831 | INFO     | chi2: 0.220555499004058
[2025-10-13 16:08:31] 2025-10-13 13:54:09,832 | INFO     | current chi2=0.220555499004058 (change=8.69570937446957 %)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,832 | INFO     | left removable region: 20
[2025-10-13 16:08:31] 2025-10-13 13:54:09,832 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,833 | INFO     | sum of deviations: -9153872646.0
[2025-10-13 16:08:31] 2025-10-13 13:54:09,833 | INFO     | mean x: 1760358247.5
[2025-10-13 16:08:31] 2025-10-13 13:54:09,833 | INFO     | mean y: 2358903.56097561
[2025-10-13 16:08:31] 2025-10-13 13:54:09,834 | INFO     | -- intersect: 11784171342.16393
[2025-10-13 16:08:31] 2025-10-13 13:54:09,834 | INFO     | intersect: 11784171342.16393
[2025-10-13 16:08:31] 2025-10-13 13:54:09,834 | INFO     | chi2: 0.11461262933172944
[2025-10-13 16:08:31] 2025-10-13 13:54:09,834 | INFO     | -- intersect: 11784171342.16393
[2025-10-13 16:08:31] 2025-10-13 13:54:09,835 | INFO     | current memory leak: -6.69 B/s (using 164 data points, chi2=0.11)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,835 | INFO     | could have reported an average CPU frequency of 2603 MHz (10 samples)
[2025-10-13 16:08:31] 2025-10-13 13:54:09,835 | INFO     | ..............................
[2025-10-13 16:08:31] 2025-10-13 13:54:09,835 | INFO     | . Timing measurements:
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . get job = 0 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . initial setup = 1 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . payload setup = 5 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . stage-in = 0 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . payload execution = 11581 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . stage-out = 1 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,836 | INFO     | . log creation = 0 s
[2025-10-13 16:08:31] 2025-10-13 13:54:09,837 | INFO     | ..............................
[2025-10-13 16:08:31] 2025-10-13 13:54:10,063 | INFO     | 
[2025-10-13 16:08:31] 2025-10-13 13:54:10,063 | INFO     | job summary report
[2025-10-13 16:08:31] 2025-10-13 13:54:10,063 | INFO     | --------------------------------------------------
[2025-10-13 16:08:31] 2025-10-13 13:54:10,063 | INFO     | PanDA job id: 6839163111
[2025-10-13 16:08:31] 2025-10-13 13:54:10,063 | INFO     | task id: 46676269
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | errors: (none)
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | pilot state: finished 
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | transexitcode: 0
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | exeerrorcode: 0
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | exeerrordiag: 
[2025-10-13 16:08:31] 2025-10-13 13:54:10,064 | INFO     | exitcode: 0
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | exitmsg: OK
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | cpuconsumptiontime: 44598 s
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | nevents: 400
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | neventsw: 0
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | pid: 3836963
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | pgrp: 3836963
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | corecount: 4
[2025-10-13 16:08:31] 2025-10-13 13:54:10,065 | INFO     | event service: False
[2025-10-13 16:08:31] 2025-10-13 13:54:10,066 | INFO     | sizes: {0: 2348752, 1: 2348894, 5: 2349156, 11: 2349212, 11591: 2378655, 11593: 2387675, 11595: 2387859, 11604: 2388053}
[2025-10-13 16:08:31] 2025-10-13 13:54:10,066 | INFO     | --------------------------------------------------
[2025-10-13 16:08:31] 2025-10-13 13:54:10,066 | INFO     | 
[2025-10-13 16:08:31] 2025-10-13 13:54:10,066 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-10-13 16:08:31] 2025-10-13 13:54:10,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:08:31] 2025-10-13 13:54:10,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:08:31] 2025-10-13 13:54:10,088 | INFO     | job 6839163111 has completed (purged errors)
[2025-10-13 16:08:31] 2025-10-13 13:54:10,088 | INFO     | overall cleanup function is called
[2025-10-13 16:08:31] 2025-10-13 13:54:11,095 | INFO     | --- collectZombieJob: --- 10, [3836963]
[2025-10-13 16:08:31] 2025-10-13 13:54:11,095 | INFO     | zombie collector waiting for pid 3836963
[2025-10-13 16:08:31] 2025-10-13 13:54:11,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:08:31] 2025-10-13 13:54:11,096 | INFO     | collected zombie processes
[2025-10-13 16:08:31] 2025-10-13 13:54:11,096 | INFO     | will attempt to kill all subprocesses of pid=3836963
[2025-10-13 16:08:31] 2025-10-13 13:54:11,434 | INFO     | process IDs to be killed: [3836963] (in reverse order)
[2025-10-13 16:08:31] 2025-10-13 13:54:11,518 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:08:31] 2025-10-13 13:54:11,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:08:31] 2025-10-13 13:54:11,528 | INFO     | did not find any defunct processes belonging to 3836963
[2025-10-13 16:08:31] 2025-10-13 13:54:11,538 | INFO     | did not find any defunct processes belonging to 3836963
[2025-10-13 16:08:31] 2025-10-13 13:54:11,538 | INFO     | ready for new job
[2025-10-13 16:08:31] 2025-10-13 13:54:11,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:08:31] 2025-10-13 13:54:11,540 | INFO     | ***************************************
[2025-10-13 16:08:31] 2025-10-13 13:54:11,540 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:08:31] 2025-10-13 13:54:11,541 | INFO     | ***************************************
[2025-10-13 16:08:31] 2025-10-13 13:54:11,541 | INFO     | 
[2025-10-13 16:08:31] 2025-10-13 13:54:11,543 | INFO     | architecture information:
[2025-10-13 16:08:31] 2025-10-13 13:54:11,543 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:08:31] 2025-10-13 13:54:11,557 | INFO     | cat /etc/os-release:
[2025-10-13 16:08:31] NAME="CentOS Linux"
[2025-10-13 16:08:31] VERSION="7 (Core)"
[2025-10-13 16:08:31] ID="centos"
[2025-10-13 16:08:31] ID_LIKE="rhel fedora"
[2025-10-13 16:08:31] VERSION_ID="7"
[2025-10-13 16:08:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:08:31] ANSI_COLOR="0;31"
[2025-10-13 16:08:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:08:31] HOME_URL="https://www.centos.org/"
[2025-10-13 16:08:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:08:31] 
[2025-10-13 16:08:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:08:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:08:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:08:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:08:31] 
[2025-10-13 16:08:31] 2025-10-13 13:54:11,558 | INFO     | ***************************************
[2025-10-13 16:08:31] 2025-10-13 13:54:12,060 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-10-13 16:08:31] 2025-10-13 13:54:12,074 | INFO     | sufficient remaining disk space (1677290635264 B)
[2025-10-13 16:08:31] 2025-10-13 13:54:12,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:08:31] 2025-10-13 13:54:12,075 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:08:31] 2025-10-13 13:54:12,075 | INFO     | update_server=False
[2025-10-13 16:08:31] 2025-10-13 13:54:12,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:08:31] 2025-10-13 13:54:12,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:08:31] 2025-10-13 13:54:12,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:08:31] 2025-10-13 13:54:12,143 | INFO     | all data control threads have been joined
[2025-10-13 16:08:31] 2025-10-13 13:54:12,170 | INFO     | all job control threads have been joined
[2025-10-13 16:08:31] 2025-10-13 13:54:12,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:08:31] 2025-10-13 13:54:12,608 | INFO     | aborting loop
[2025-10-13 16:08:31] 2025-10-13 13:54:12,754 | INFO     | all payload control threads have been joined
[2025-10-13 16:08:31] 2025-10-13 13:54:13,080 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,091 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,148 | INFO     | [data] control thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,175 | INFO     | [job] control thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,386 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,388 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,515 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,613 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:13,757 | INFO     | [payload] control thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:14,102 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:14,231 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:14,292 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:14,387 | INFO     | [job] validate thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:14,404 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:14,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:08:31] 2025-10-13 13:54:15,965 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:16,081 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:08:31] 2025-10-13 13:54:41,903 | INFO     | PID=3827753 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:08:31] 2025-10-13 13:54:41,904 | INFO     | .. there are 3 such processes running
[2025-10-13 16:08:31] 2025-10-13 13:54:41,904 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:08:31] 2025-10-13 13:54:41,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:08:31] 2025-10-13 13:54:41,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:08:31] 2025-10-13 13:54:49,263 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:08:31] 2025-10-13 13:54:50,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23158940616512)>', '<ExcThread(monitor, started 23158696400640)>']
[2025-10-13 16:08:31] 2025-10-13 13:54:50,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:08:31] 2025-10-13 13:54:50,949 | INFO     | [monitor] control thread has ended
[2025-10-13 16:08:31] 2025-10-13 13:54:55,264 | INFO     | all workflow threads have been joined
[2025-10-13 16:08:31] 2025-10-13 13:54:55,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:08:31] 2025-10-13 13:54:55,265 | INFO     | traces error code: 0
[2025-10-13 16:08:31] 2025-10-13 13:54:55,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:08:31] 2025-10-13 13:54:55,392 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:08:31] 2025-10-13 13:54:55,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:08:31] 2025-10-13 13:54:55,396 [wrapper] pilotpid: 3827753
[2025-10-13 16:08:31] 2025-10-13 13:54:55,399 [wrapper] Pilot exit status: 0
[2025-10-13 16:08:31] 2025-10-13 13:54:55,408 [wrapper] pandaids: 6839163111
[2025-10-13 16:08:31] 2025-10-13 13:54:55,462 [wrapper] cleanup supervisor_pilot 3980487 3827754
[2025-10-13 16:08:31] 2025-10-13 13:54:55,464 [wrapper] Test setup, not cleaning
[2025-10-13 16:08:31] 2025-10-13 13:54:55,467 [wrapper] apfmon messages muted
[2025-10-13 16:08:31] 2025-10-13 13:54:55,469 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:08:31] 2025-10-13 13:54:55,471 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:08:31]  *** Error codes and diagnostics ***
[2025-10-13 16:08:31]     "exeErrorCode": 0,
[2025-10-13 16:08:31]     "exeErrorDiag": "",
[2025-10-13 16:08:31]     "pilotErrorCode": 0,
[2025-10-13 16:08:31]     "pilotErrorDiag": "",
[2025-10-13 16:08:31]  *** Listing of results directory ***
[2025-10-13 16:08:31] total 405392
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 01:21 pilot3.tar.gz
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:51 queuedata.json
[2025-10-13 16:08:31] -rwx------ 1 boinc boinc     36292 Oct 12 01:52 runpilot2-wrapper.sh
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:08:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:40 run_atlas
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:40 job.xml
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc      6421 Oct 13 12:40 init_data.xml
[2025-10-13 16:08:31] -rw-r--r-- 2 boinc boinc 222338019 Oct 13 12:40 EVNT.46676267._002739.pool.root.1
[2025-10-13 16:08:31] -rw-r--r-- 2 boinc boinc    569680 Oct 13 12:40 input.tar.gz
[2025-10-13 16:08:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:40 start_atlas.sh
[2025-10-13 16:08:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:40 shared
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:40 boinc_lockfile
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:40 pandaJob.out
[2025-10-13 16:08:31] -rw------- 1 boinc boinc    972497 Oct 13 12:40 agis_schedconf.cvmfs.json
[2025-10-13 16:08:31] drwx------ 5 boinc boinc      4096 Oct 13 12:40 pilot3
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc       527 Oct 13 15:53 boinc_task_state.xml
[2025-10-13 16:08:31] -rw------- 1 boinc boinc 184862447 Oct 13 15:53 HITS.46676269._067275.pool.root.1
[2025-10-13 16:08:31] -rw------- 1 boinc boinc        95 Oct 13 15:53 pilot_heartbeat.json
[2025-10-13 16:08:31] -rw------- 1 boinc boinc      1030 Oct 13 15:53 memory_monitor_summary.json
[2025-10-13 16:08:31] -rw------- 1 boinc boinc   1560580 Oct 13 15:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:08:31] -rw------- 1 boinc boinc    354840 Oct 13 15:53 log.46676269._067275.job.log.tgz.1
[2025-10-13 16:08:31] -rw------- 1 boinc boinc      7829 Oct 13 15:54 heartbeat.json
[2025-10-13 16:08:31] -rw------- 1 boinc boinc      4834 Oct 13 15:54 pilotlog.txt
[2025-10-13 16:08:31] -rw------- 1 boinc boinc   1657393 Oct 13 15:54 log.46676269._067275.job.log.1
[2025-10-13 16:08:31] -rw------- 1 boinc boinc       357 Oct 13 15:54 output.list
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:54 runtime_log
[2025-10-13 16:08:31] -rw------- 1 boinc boinc   2027520 Oct 13 15:54 result.tar.gz
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc      9070 Oct 13 15:54 runtime_log.err
[2025-10-13 16:08:31] -rw------- 1 boinc boinc       666 Oct 13 15:54 M14LDmRZyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr0hNDmfIQMRm.diag
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:08 wrapper_checkpoint.txt
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:08 boinc_mmap_file
[2025-10-13 16:08:31] -rw-r--r-- 1 boinc boinc     20916 Oct 13 16:08 stderr.txt
[2025-10-13 16:08:31] HITS file was successfully produced:
[2025-10-13 16:08:31] -rw------- 1 boinc boinc 184862447 Oct 13 15:53 shared/HITS.pool.root.1
[2025-10-13 16:08:31]  *** Contents of shared directory: ***
[2025-10-13 16:08:31] total 400224
[2025-10-13 16:08:31] -rw-r--r-- 2 boinc boinc 222338019 Oct 13 12:40 ATLAS.root_0
[2025-10-13 16:08:31] -rw-r--r-- 2 boinc boinc    569680 Oct 13 12:40 input.tar.gz
[2025-10-13 16:08:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:40 start_atlas.sh
[2025-10-13 16:08:31] -rw------- 1 boinc boinc 184862447 Oct 13 15:53 HITS.pool.root.1
[2025-10-13 16:08:31] -rw------- 1 boinc boinc   2027520 Oct 13 15:54 result.tar.gz
16:08:33 (3824096): run_atlas exited; CPU time 45007.732258
16:08:33 (3824096): called boinc_finish(0)

</stderr_txt>
]]>

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