Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:54:43 (8009): wrapper (7.7.26015): starting
01:54:43 (8009): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 01:54:43] Arguments: --nthreads 12
[2025-10-12 01:54:43] Threads: 12
[2025-10-12 01:54:43] Checking for CVMFS
[2025-10-12 01:54:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:54:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:54:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:54:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:54:43] 2.11.2.0 2987 222442 97340 151609 3 57 14062622 20275200 1 130560 1 108077281 99.984 13378784 12221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 01:54:43] CVMFS is ok
[2025-10-12 01:54:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:54:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:54:43] Further information can be found at the LHC@home message board.
[2025-10-12 01:54:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:54:43] Checking for apptainer binary...
[2025-10-12 01:54:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:54:43] Running /usr/bin/apptainer --version
[2025-10-12 01:54:43] apptainer version 1.3.2-1.el7
[2025-10-12 01:54:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:54:45] c-205-19.aglt2.org
[2025-10-12 01:54:45] apptainer works
[2025-10-12 01:54:45] Set ATHENA_PROC_NUMBER=12
[2025-10-12 01:54:45] Set ATHENA_CORE_NUMBER=12
[2025-10-12 01:54:45] Starting ATLAS job with PandaID=6838634084
[2025-10-12 01:54:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:11:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:11:36]  status_code=0
[2025-10-12 03:11:36]  storage_token=
[2025-10-12 03:11:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838634084/log.46676269._061604.job.log.tgz.1
[2025-10-12 03:11:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/8b/log.46676269._061604.job.log.tgz.1
[2025-10-12 03:11:36]  workdir=None
[2025-10-12 03:11:36] ]
[2025-10-12 03:11:36] 2025-10-12 07:10:53,828 | INFO     | transferring file log.46676269._061604.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838634084/log.46676269._061604.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 03:11:36] 2025-10-12 07:10:53,828 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838634084/log.46676269._061604.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._061604.job
[2025-10-12 03:11:36] 2025-10-12 07:10:53,851 | INFO     | adding to output.list: log.46676269._061604.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/8b/log.46676269._061604.job.log.tg
[2025-10-12 03:11:36] 2025-10-12 07:10:53,852 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 03:11:36] 2025-10-12 07:10:53,852 | INFO     | summary of transferred files:
[2025-10-12 03:11:36] 2025-10-12 07:10:53,852 | INFO     |  -- lfn=log.46676269._061604.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 03:11:36] 2025-10-12 07:10:53,853 | INFO     | stage-out finished correctly
[2025-10-12 03:11:36] 2025-10-12 07:10:54,494 | INFO     | time since job start (4554s) is within the limit (172800.0s)
[2025-10-12 03:11:36] 2025-10-12 07:10:56,499 | INFO     | time since job start (4556s) is within the limit (172800.0s)
[2025-10-12 03:11:36] 2025-10-12 07:10:57,317 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 03:11:36] 2025-10-12 07:10:57,751 | WARNING  | process 18186 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 03:11:36] 2025-10-12 07:10:57,751 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634084/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:11:36] 2025-10-12 07:10:57,838 | INFO     | number of running child processes to parent process 18186: 1
[2025-10-12 03:11:36] 2025-10-12 07:10:57,838 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:11:36] 2025-10-12 07:10:58,505 | INFO     | time since job start (4558s) is within the limit (172800.0s)
[2025-10-12 03:11:36] 2025-10-12 07:10:58,919 | INFO     | job 6838634084 has state=finished
[2025-10-12 03:11:36] 2025-10-12 07:10:58,919 | INFO     | preparing for final server update for job 6838634084 in state='finished'
[2025-10-12 03:11:36] 2025-10-12 07:10:58,919 | INFO     | this job has now completed (state=finished)
[2025-10-12 03:11:36] 2025-10-12 07:10:58,920 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 03:11:36] 2025-10-12 07:10:58,920 | INFO     | log transfer has been attempted: DONE
[2025-10-12 03:11:36] 2025-10-12 07:10:58,920 | INFO     | job 6838634084 has finished - writing final server update
[2025-10-12 03:11:36] 2025-10-12 07:10:58,920 | INFO     | total number of processed events: 400 (read)
[2025-10-12 03:11:36] 2025-10-12 07:10:58,921 | INFO     | executing command: lscpu
[2025-10-12 03:11:36] 2025-10-12 07:10:58,947 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 03:11:36] 2025-10-12 07:11:00,341 | INFO     | monitor loop #339: job 0:6838634084 is in state 'finished'
[2025-10-12 03:11:36] 2025-10-12 07:11:00,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 03:11:36] 2025-10-12 07:11:00,511 | INFO     | time since job start (4560s) is within the limit (172800.0s)
[2025-10-12 03:11:36] 2025-10-12 07:11:02,517 | INFO     | time since job start (4562s) is within the limit (172800.0s)
[2025-10-12 03:11:36] 2025-10-12 07:11:02,844 | INFO     | monitor loop #340: job 0:6838634084 is in state 'finished'
[2025-10-12 03:11:36] 2025-10-12 07:11:02,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,677 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 03:11:36] 2025-10-12 07:11:03,681 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-10-12 03:11:36] 2025-10-12 07:11:03,683 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634084/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,684 | INFO     | extracted standard info from prmon json
[2025-10-12 03:11:36] 2025-10-12 07:11:03,684 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:11:36] 2025-10-12 07:11:03,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:11:36] 2025-10-12 07:11:03,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:11:36] 2025-10-12 07:11:03,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:11:36] 2025-10-12 07:11:03,687 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:11:36] 2025-10-12 07:11:03,687 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 03:11:36] 2025-10-12 07:11:03,688 | INFO     | sum of deviations: -1338768769.0000012
[2025-10-12 03:11:36] 2025-10-12 07:11:03,688 | INFO     | mean x: 1760250877.5
[2025-10-12 03:11:36] 2025-10-12 07:11:03,688 | INFO     | mean y: 2687215.1470588236
[2025-10-12 03:11:36] 2025-10-12 07:11:03,688 | INFO     | -- intersect: 24177822433.212936
[2025-10-12 03:11:36] 2025-10-12 07:11:03,688 | INFO     | intersect: 24177822433.212936
[2025-10-12 03:11:36] 2025-10-12 07:11:03,688 | INFO     | chi2: 0.042154386800614264
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | -- intersect: 24177822433.212936
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | current memory leak: -13.73 B/s (using 68 data points, chi2=0.04)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | ..............................
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | . Timing measurements:
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | . get job = 0 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,689 | INFO     | . initial setup = 2 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,690 | INFO     | . payload setup = 7 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,690 | INFO     | . stage-in = 0 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,690 | INFO     | . payload execution = 4524 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,690 | INFO     | . stage-out = 0 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,690 | INFO     | . log creation = 0 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,690 | INFO     | ..............................
[2025-10-12 03:11:36] 2025-10-12 07:11:03,771 | INFO     | 
[2025-10-12 03:11:36] 2025-10-12 07:11:03,771 | INFO     | job summary report
[2025-10-12 03:11:36] 2025-10-12 07:11:03,771 | INFO     | --------------------------------------------------
[2025-10-12 03:11:36] 2025-10-12 07:11:03,771 | INFO     | PanDA job id: 6838634084
[2025-10-12 03:11:36] 2025-10-12 07:11:03,772 | INFO     | task id: 46676269
[2025-10-12 03:11:36] 2025-10-12 07:11:03,772 | INFO     | errors: (none)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:11:36] 2025-10-12 07:11:03,772 | INFO     | pilot state: finished 
[2025-10-12 03:11:36] 2025-10-12 07:11:03,773 | INFO     | transexitcode: 0
[2025-10-12 03:11:36] 2025-10-12 07:11:03,773 | INFO     | exeerrorcode: 0
[2025-10-12 03:11:36] 2025-10-12 07:11:03,773 | INFO     | exeerrordiag: 
[2025-10-12 03:11:36] 2025-10-12 07:11:03,773 | INFO     | exitcode: 0
[2025-10-12 03:11:36] 2025-10-12 07:11:03,773 | INFO     | exitmsg: OK
[2025-10-12 03:11:36] 2025-10-12 07:11:03,773 | INFO     | cpuconsumptiontime: 47377 s
[2025-10-12 03:11:36] 2025-10-12 07:11:03,774 | INFO     | nevents: 400
[2025-10-12 03:11:36] 2025-10-12 07:11:03,774 | INFO     | neventsw: 0
[2025-10-12 03:11:36] 2025-10-12 07:11:03,774 | INFO     | pid: 18186
[2025-10-12 03:11:36] 2025-10-12 07:11:03,774 | INFO     | pgrp: 18186
[2025-10-12 03:11:36] 2025-10-12 07:11:03,774 | INFO     | corecount: 12
[2025-10-12 03:11:36] 2025-10-12 07:11:03,774 | INFO     | event service: False
[2025-10-12 03:11:36] 2025-10-12 07:11:03,775 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4535: 2375280, 4537: 2384278, 4540: 2384334, 4547: 2384656}
[2025-10-12 03:11:36] 2025-10-12 07:11:03,775 | INFO     | --------------------------------------------------
[2025-10-12 03:11:36] 2025-10-12 07:11:03,775 | INFO     | 
[2025-10-12 03:11:36] 2025-10-12 07:11:03,775 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 03:11:36] 2025-10-12 07:11:03,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,798 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,798 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,798 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,801 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:11:36] 2025-10-12 07:11:03,802 | INFO     | job 6838634084 has completed (purged errors)
[2025-10-12 03:11:36] 2025-10-12 07:11:03,802 | INFO     | overall cleanup function is called
[2025-10-12 03:11:36] 2025-10-12 07:11:04,810 | INFO     | --- collectZombieJob: --- 10, [18186]
[2025-10-12 03:11:36] 2025-10-12 07:11:04,810 | INFO     | zombie collector waiting for pid 18186
[2025-10-12 03:11:36] 2025-10-12 07:11:04,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:11:36] 2025-10-12 07:11:04,811 | INFO     | collected zombie processes
[2025-10-12 03:11:36] 2025-10-12 07:11:04,811 | INFO     | will attempt to kill all subprocesses of pid=18186
[2025-10-12 03:11:36] 2025-10-12 07:11:04,903 | INFO     | process IDs to be killed: [18186] (in reverse order)
[2025-10-12 03:11:36] 2025-10-12 07:11:04,955 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:11:36] 2025-10-12 07:11:04,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:11:36] 2025-10-12 07:11:04,958 | INFO     | did not find any defunct processes belonging to 18186
[2025-10-12 03:11:36] 2025-10-12 07:11:04,960 | INFO     | did not find any defunct processes belonging to 18186
[2025-10-12 03:11:36] 2025-10-12 07:11:04,961 | INFO     | ready for new job
[2025-10-12 03:11:36] 2025-10-12 07:11:04,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:11:36] 2025-10-12 07:11:04,962 | INFO     | ***************************************
[2025-10-12 03:11:36] 2025-10-12 07:11:04,962 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:11:36] 2025-10-12 07:11:04,962 | INFO     | ***************************************
[2025-10-12 03:11:36] 2025-10-12 07:11:04,962 | INFO     | 
[2025-10-12 03:11:36] 2025-10-12 07:11:04,963 | INFO     | architecture information:
[2025-10-12 03:11:36] 2025-10-12 07:11:04,963 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:11:36] 2025-10-12 07:11:04,978 | INFO     | cat /etc/os-release:
[2025-10-12 03:11:36] NAME="CentOS Linux"
[2025-10-12 03:11:36] VERSION="7 (Core)"
[2025-10-12 03:11:36] ID="centos"
[2025-10-12 03:11:36] ID_LIKE="rhel fedora"
[2025-10-12 03:11:36] VERSION_ID="7"
[2025-10-12 03:11:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:11:36] ANSI_COLOR="0;31"
[2025-10-12 03:11:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:11:36] HOME_URL="https://www.centos.org/"
[2025-10-12 03:11:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:11:36] 
[2025-10-12 03:11:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:11:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:11:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:11:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:11:36] 
[2025-10-12 03:11:36] 2025-10-12 07:11:04,978 | INFO     | ***************************************
[2025-10-12 03:11:36] 2025-10-12 07:11:05,481 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 03:11:36] 2025-10-12 07:11:05,497 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-12 03:11:36] 2025-10-12 07:11:05,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:11:36] 2025-10-12 07:11:05,498 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:11:36] 2025-10-12 07:11:05,498 | INFO     | update_server=False
[2025-10-12 03:11:36] 2025-10-12 07:11:05,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:11:36] 2025-10-12 07:11:05,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:11:36] 2025-10-12 07:11:05,579 | INFO     | all data control threads have been joined
[2025-10-12 03:11:36] 2025-10-12 07:11:05,720 | INFO     | all job control threads have been joined
[2025-10-12 03:11:36] 2025-10-12 07:11:06,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:11:36] 2025-10-12 07:11:06,353 | INFO     | aborting loop
[2025-10-12 03:11:36] 2025-10-12 07:11:06,487 | INFO     | all payload control threads have been joined
[2025-10-12 03:11:36] 2025-10-12 07:11:06,504 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,504 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,541 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,586 | INFO     | [data] control thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,725 | INFO     | [job] control thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,916 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:06,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:11:36] 2025-10-12 07:11:07,017 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:07,352 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:11:36] 2025-10-12 07:11:07,358 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:07,492 | INFO     | [payload] control thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:07,514 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:07,529 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:07,810 | INFO     | [job] validate thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:07,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:11:36] 2025-10-12 07:11:08,957 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:11,914 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:15,602 | INFO     | job.realtimelogging is not enabled
[2025-10-12 03:11:36] 2025-10-12 07:11:16,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:11:36] 2025-10-12 07:11:18,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734896953152)>', '<ExcThread(monitor, started 139734454093568)>']
[2025-10-12 03:11:36] 2025-10-12 07:11:23,166 | INFO     | all workflow threads have been joined
[2025-10-12 03:11:36] 2025-10-12 07:11:23,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:11:36] 2025-10-12 07:11:23,166 | INFO     | traces error code: 0
[2025-10-12 03:11:36] 2025-10-12 07:11:23,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:11:36] 2025-10-12 07:11:35,723 | INFO     | PID=11690 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 03:11:36] 2025-10-12 07:11:35,724 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:11:36] 2025-10-12 07:11:35,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:11:36] 2025-10-12 07:11:35,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:11:36] 2025-10-12 07:11:35,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:11:36] 2025-10-12 07:11:35,724 | INFO     | [monitor] control thread has ended
[2025-10-12 03:11:36] 2025-10-12 07:11:35,810 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:11:36] 2025-10-12 07:11:35,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:11:36] 2025-10-12 07:11:35,817 [wrapper] pilotpid: 11690
[2025-10-12 03:11:36] 2025-10-12 07:11:35,821 [wrapper] Pilot exit status: 0
[2025-10-12 03:11:36] 2025-10-12 07:11:35,837 [wrapper] pandaids: 6838634084
[2025-10-12 03:11:36] 2025-10-12 07:11:35,880 [wrapper] cleanup supervisor_pilot 12359 11691
[2025-10-12 03:11:36] 2025-10-12 07:11:35,884 [wrapper] Test setup, not cleaning
[2025-10-12 03:11:36] 2025-10-12 07:11:35,888 [wrapper] apfmon messages muted
[2025-10-12 03:11:36] 2025-10-12 07:11:35,892 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:11:36] 2025-10-12 07:11:35,896 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:11:36]  *** Error codes and diagnostics ***
[2025-10-12 03:11:36]     "exeErrorCode": 0,
[2025-10-12 03:11:36]     "exeErrorDiag": "",
[2025-10-12 03:11:36]     "pilotErrorCode": 0,
[2025-10-12 03:11:36]     "pilotErrorDiag": "",
[2025-10-12 03:11:36]  *** Listing of results directory ***
[2025-10-12 03:11:36] total 413992
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:07 pilot3.tar.gz
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:13 queuedata.json
[2025-10-12 03:11:36] -rwx------ 1 boincer umatlas     36292 Oct 11 13:13 runpilot2-wrapper.sh
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas       100 Oct 12 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:11:36] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 01:54 run_atlas
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas       105 Oct 12 01:54 job.xml
[2025-10-12 03:11:36] -rw-r--r-- 2 boincer umatlas 223178244 Oct 12 01:54 EVNT.46676267._002474.pool.root.1
[2025-10-12 03:11:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:54 start_atlas.sh
[2025-10-12 03:11:36] drwxrwx--x 2 boincer umatlas      4096 Oct 12 01:54 shared
[2025-10-12 03:11:36] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 01:54 input.tar.gz
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas         0 Oct 12 01:54 boinc_lockfile
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 01:54 pandaJob.out
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas    975528 Oct 12 01:54 agis_schedconf.cvmfs.json
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas   1560580 Oct 12 01:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:11:36] drwx------ 5 boincer umatlas      4096 Oct 12 01:55 pilot3
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas 194775981 Oct 12 03:10 HITS.46676269._061604.pool.root.1
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 03:10 init_data.xml
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas       530 Oct 12 03:10 boinc_task_state.xml
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas      1050 Oct 12 03:10 memory_monitor_summary.json
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas    377423 Oct 12 03:10 log.46676269._061604.job.log.tgz.1
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas        95 Oct 12 03:10 pilot_heartbeat.json
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas      7852 Oct 12 03:11 heartbeat.json
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas       745 Oct 12 03:11 pilotlog.txt
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas    660587 Oct 12 03:11 log.46676269._061604.job.log.1
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas       357 Oct 12 03:11 output.list
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas       620 Oct 12 03:11 runtime_log
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas   1054720 Oct 12 03:11 result.tar.gz
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 03:11 runtime_log.err
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas       659 Oct 12 03:11 24gKDmFLsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX2gNDm7WsFzn.diag
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 03:11 boinc_mmap_file
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas        27 Oct 12 03:11 wrapper_checkpoint.txt
[2025-10-12 03:11:36] -rw-r--r-- 1 boincer umatlas     22087 Oct 12 03:11 stderr.txt
[2025-10-12 03:11:36] HITS file was successfully produced:
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas 194775981 Oct 12 03:10 shared/HITS.pool.root.1
[2025-10-12 03:11:36]  *** Contents of shared directory: ***
[2025-10-12 03:11:36] total 409772
[2025-10-12 03:11:36] -rw-r--r-- 2 boincer umatlas 223178244 Oct 12 01:54 ATLAS.root_0
[2025-10-12 03:11:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:54 start_atlas.sh
[2025-10-12 03:11:36] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 01:54 input.tar.gz
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas 194775981 Oct 12 03:10 HITS.pool.root.1
[2025-10-12 03:11:36] -rw------- 1 boincer umatlas   1054720 Oct 12 03:11 result.tar.gz
03:11:37 (8009): run_atlas exited; CPU time 47353.454537
03:11:37 (8009): called boinc_finish(0)

</stderr_txt>
]]>

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