Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:35:40 (21376): wrapper (7.7.26015): starting
01:35:40 (21376): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 01:35:40] Arguments: --nthreads 8
[2025-10-12 01:35:40] Threads: 8
[2025-10-12 01:35:40] Checking for CVMFS
[2025-10-12 01:35:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:35:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:35:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:35:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:35:41] 2.11.2.0 2790 185318 80984 151609 3 57 14542423 20275200 1 130560 1 65132789 99.977 6933848 23175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 01:35:41] CVMFS is ok
[2025-10-12 01:35:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:35:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:35:41] Further information can be found at the LHC@home message board.
[2025-10-12 01:35:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:35:41] Checking for apptainer binary...
[2025-10-12 01:35:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:35:41] Running /usr/bin/apptainer --version
[2025-10-12 01:35:41] apptainer version 1.3.2-1.el7
[2025-10-12 01:35:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:35:43] c-204-4.aglt2.org
[2025-10-12 01:35:43] apptainer works
[2025-10-12 01:35:43] Set ATHENA_PROC_NUMBER=8
[2025-10-12 01:35:43] Set ATHENA_CORE_NUMBER=8
[2025-10-12 01:35:43] Starting ATLAS job with PandaID=6839164167
[2025-10-12 01:35:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:45:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:45:18] 2025-10-12 07:44:45,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:45:18] 2025-10-12 07:44:45,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:45:18] 2025-10-12 07:44:45,849 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:45:18] 2025-10-12 07:44:45,850 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 03:45:18] 2025-10-12 07:44:45,850 | INFO     | sum of deviations: 4131850585.499998
[2025-10-12 03:45:18] 2025-10-12 07:44:45,850 | INFO     | mean x: 1760251204.5
[2025-10-12 03:45:18] 2025-10-12 07:44:45,851 | INFO     | mean y: 2518465.119047619
[2025-10-12 03:45:18] 2025-10-12 07:44:45,851 | INFO     | -- intersect: -11723661508.055473
[2025-10-12 03:45:18] 2025-10-12 07:44:45,851 | INFO     | intersect: -11723661508.055473
[2025-10-12 03:45:18] 2025-10-12 07:44:45,851 | INFO     | chi2: 1.690188037392812
[2025-10-12 03:45:18] 2025-10-12 07:44:45,852 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 03:45:18] 2025-10-12 07:44:45,852 | INFO     | sum of deviations: 4192424958.0000014
[2025-10-12 03:45:18] 2025-10-12 07:44:45,852 | INFO     | mean x: 1760251052.0
[2025-10-12 03:45:18] 2025-10-12 07:44:45,852 | INFO     | mean y: 2518595.396694215
[2025-10-12 03:45:18] 2025-10-12 07:44:45,853 | INFO     | -- intersect: -13432399998.384026
[2025-10-12 03:45:18] 2025-10-12 07:44:45,853 | INFO     | intersect: -13432399998.384026
[2025-10-12 03:45:18] 2025-10-12 07:44:45,853 | INFO     | chi2: 1.6923794269548442
[2025-10-12 03:45:18] 2025-10-12 07:44:45,853 | INFO     | current chi2=1.6923794269548442 (change=-0.12965359554979192 %)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,853 | INFO     | right removable region: 120
[2025-10-12 03:45:18] 2025-10-12 07:44:45,854 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 03:45:18] 2025-10-12 07:44:45,854 | INFO     | sum of deviations: -15615234206.000002
[2025-10-12 03:45:18] 2025-10-12 07:44:45,854 | INFO     | mean x: 1760251357.0
[2025-10-12 03:45:18] 2025-10-12 07:44:45,854 | INFO     | mean y: 2560173.2892561983
[2025-10-12 03:45:18] 2025-10-12 07:44:45,855 | INFO     | -- intersect: 50042677487.84571
[2025-10-12 03:45:18] 2025-10-12 07:44:45,855 | INFO     | intersect: 50042677487.84571
[2025-10-12 03:45:18] 2025-10-12 07:44:45,855 | INFO     | chi2: 0.14469435682904974
[2025-10-12 03:45:18] 2025-10-12 07:44:45,855 | INFO     | current chi2=0.14469435682904974 (change=91.43915625788908 %)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,855 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 03:45:18] 2025-10-12 07:44:45,856 | INFO     | sum of deviations: -16082431315.000002
[2025-10-12 03:45:18] 2025-10-12 07:44:45,856 | INFO     | mean x: 1760251509.5
[2025-10-12 03:45:18] 2025-10-12 07:44:45,856 | INFO     | mean y: 2561134.706896552
[2025-10-12 03:45:18] 2025-10-12 07:44:45,856 | INFO     | -- intersect: 58495886978.4702
[2025-10-12 03:45:18] 2025-10-12 07:44:45,857 | INFO     | intersect: 58495886978.4702
[2025-10-12 03:45:18] 2025-10-12 07:44:45,857 | INFO     | chi2: 0.11596528929015529
[2025-10-12 03:45:18] 2025-10-12 07:44:45,857 | INFO     | current chi2=0.11596528929015529 (change=19.855002066761063 %)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,857 | INFO     | sufficient remaining disk space (18579718144 B)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,857 | INFO     | left removable region: 20
[2025-10-12 03:45:18] 2025-10-12 07:44:45,858 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,858 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 03:45:18] 2025-10-12 07:44:45,859 | INFO     | sum of deviations: -7989987827.000001
[2025-10-12 03:45:18] 2025-10-12 07:44:45,859 | INFO     | mean x: 1760251631.5
[2025-10-12 03:45:18] 2025-10-12 07:44:45,859 | INFO     | mean y: 2542330.26
[2025-10-12 03:45:18] 2025-10-12 07:44:45,859 | INFO     | -- intersect: 45363882897.99124
[2025-10-12 03:45:18] 2025-10-12 07:44:45,859 | INFO     | intersect: 45363882897.99124
[2025-10-12 03:45:18] 2025-10-12 07:44:45,860 | INFO     | chi2: 0.09005727828683147
[2025-10-12 03:45:18] 2025-10-12 07:44:45,860 | INFO     | -- intersect: 45363882897.99124
[2025-10-12 03:45:18] 2025-10-12 07:44:45,860 | INFO     | current memory leak: -25.77 B/s (using 100 data points, chi2=0.09)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,860 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,861 | INFO     | ..............................
[2025-10-12 03:45:18] 2025-10-12 07:44:45,861 | INFO     | . Timing measurements:
[2025-10-12 03:45:18] 2025-10-12 07:44:45,861 | INFO     | . get job = 0 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,861 | INFO     | . initial setup = 2 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,861 | INFO     | . payload setup = 8 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,861 | INFO     | . stage-in = 0 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,862 | INFO     | . payload execution = 7688 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,862 | INFO     | . stage-out = 0 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,862 | INFO     | . log creation = 0 s
[2025-10-12 03:45:18] 2025-10-12 07:44:45,862 | INFO     | ..............................
[2025-10-12 03:45:18] 2025-10-12 07:44:45,931 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6839164167: 3418408 B (within 2537553920 B limit)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,952 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6839164167/HITS.46676269._067756.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,957 | INFO     | total size of present files: 0 B (workdir size: 3418408 B)
[2025-10-12 03:45:18] 2025-10-12 07:44:45,957 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6839164167/HITS.46676269._067756.pool.root.1 since it does not exist
[2025-10-12 03:45:18] 2025-10-12 07:44:46,049 | INFO     | number of running child processes to parent process 31547: 1
[2025-10-12 03:45:18] 2025-10-12 07:44:46,049 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:45:18] 2025-10-12 07:44:46,049 | INFO     | aborting job monitoring since job object (job id=6839164167) has expired
[2025-10-12 03:45:18] 2025-10-12 07:44:46,182 | INFO     | 
[2025-10-12 03:45:18] 2025-10-12 07:44:46,182 | INFO     | job summary report
[2025-10-12 03:45:18] 2025-10-12 07:44:46,183 | INFO     | --------------------------------------------------
[2025-10-12 03:45:18] 2025-10-12 07:44:46,183 | INFO     | PanDA job id: 6839164167
[2025-10-12 03:45:18] 2025-10-12 07:44:46,183 | INFO     | task id: 46676269
[2025-10-12 03:45:18] 2025-10-12 07:44:46,183 | INFO     | errors: (none)
[2025-10-12 03:45:18] 2025-10-12 07:44:46,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | pilot state: finished 
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | transexitcode: 0
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | exeerrorcode: 0
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | exeerrordiag: 
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | exitcode: 0
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | exitmsg: OK
[2025-10-12 03:45:18] 2025-10-12 07:44:46,184 | INFO     | cpuconsumptiontime: 56434 s
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | nevents: 400
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | neventsw: 0
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | pid: 31547
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | pgrp: 31547
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | corecount: 8
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | event service: False
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7700: 2376720, 7701: 2385718, 7702: 2385774, 7708: 2386096}
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | --------------------------------------------------
[2025-10-12 03:45:18] 2025-10-12 07:44:46,185 | INFO     | 
[2025-10-12 03:45:18] 2025-10-12 07:44:46,186 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 03:45:18] 2025-10-12 07:44:46,215 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,215 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,216 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,216 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,217 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:45:18] 2025-10-12 07:44:46,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:45:18] 2025-10-12 07:44:46,219 | INFO     | job 6839164167 has completed (purged errors)
[2025-10-12 03:45:18] 2025-10-12 07:44:46,219 | INFO     | overall cleanup function is called
[2025-10-12 03:45:18] 2025-10-12 07:44:47,227 | INFO     | --- collectZombieJob: --- 10, [31547]
[2025-10-12 03:45:18] 2025-10-12 07:44:47,228 | INFO     | zombie collector waiting for pid 31547
[2025-10-12 03:45:18] 2025-10-12 07:44:47,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:45:18] 2025-10-12 07:44:47,228 | INFO     | collected zombie processes
[2025-10-12 03:45:18] 2025-10-12 07:44:47,228 | INFO     | will attempt to kill all subprocesses of pid=31547
[2025-10-12 03:45:18] 2025-10-12 07:44:47,319 | INFO     | process IDs to be killed: [31547] (in reverse order)
[2025-10-12 03:45:18] 2025-10-12 07:44:47,375 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:45:18] 2025-10-12 07:44:47,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:45:18] 2025-10-12 07:44:47,379 | INFO     | did not find any defunct processes belonging to 31547
[2025-10-12 03:45:18] 2025-10-12 07:44:47,383 | INFO     | did not find any defunct processes belonging to 31547
[2025-10-12 03:45:18] 2025-10-12 07:44:47,384 | INFO     | ready for new job
[2025-10-12 03:45:18] 2025-10-12 07:44:47,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:45:18] 2025-10-12 07:44:47,386 | INFO     | ***************************************
[2025-10-12 03:45:18] 2025-10-12 07:44:47,386 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:45:18] 2025-10-12 07:44:47,386 | INFO     | ***************************************
[2025-10-12 03:45:18] 2025-10-12 07:44:47,386 | INFO     | 
[2025-10-12 03:45:18] 2025-10-12 07:44:47,386 | INFO     | architecture information:
[2025-10-12 03:45:18] 2025-10-12 07:44:47,387 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:45:18] 2025-10-12 07:44:47,407 | INFO     | cat /etc/os-release:
[2025-10-12 03:45:18] NAME="CentOS Linux"
[2025-10-12 03:45:18] VERSION="7 (Core)"
[2025-10-12 03:45:18] ID="centos"
[2025-10-12 03:45:18] ID_LIKE="rhel fedora"
[2025-10-12 03:45:18] VERSION_ID="7"
[2025-10-12 03:45:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:45:18] ANSI_COLOR="0;31"
[2025-10-12 03:45:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:45:18] HOME_URL="https://www.centos.org/"
[2025-10-12 03:45:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:45:18] 
[2025-10-12 03:45:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:45:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:45:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:45:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:45:18] 
[2025-10-12 03:45:18] 2025-10-12 07:44:47,408 | INFO     | ***************************************
[2025-10-12 03:45:18] 2025-10-12 07:44:47,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 03:45:18] 2025-10-12 07:44:47,936 | INFO     | sufficient remaining disk space (18583912448 B)
[2025-10-12 03:45:18] 2025-10-12 07:44:47,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:45:18] 2025-10-12 07:44:47,937 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:45:18] 2025-10-12 07:44:47,938 | INFO     | update_server=False
[2025-10-12 03:45:18] 2025-10-12 07:44:47,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:45:18] 2025-10-12 07:44:47,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:45:18] 2025-10-12 07:44:47,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:45:18] 2025-10-12 07:44:47,940 | INFO     | aborting loop
[2025-10-12 03:45:18] 2025-10-12 07:44:47,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:45:18] 2025-10-12 07:44:48,020 | INFO     | all data control threads have been joined
[2025-10-12 03:45:18] 2025-10-12 07:44:48,440 | INFO     | all payload control threads have been joined
[2025-10-12 03:45:18] 2025-10-12 07:44:48,745 | INFO     | all job control threads have been joined
[2025-10-12 03:45:18] 2025-10-12 07:44:48,944 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:48,944 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:48,945 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,026 | INFO     | [data] control thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,186 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,351 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,442 | INFO     | [payload] control thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,750 | INFO     | [job] control thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,841 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:49,946 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:50,357 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:50,363 | INFO     | [job] validate thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:50,405 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:50,419 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:50,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:45:18] 2025-10-12 07:44:54,488 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:44:58,844 | INFO     | job.realtimelogging is not enabled
[2025-10-12 03:45:18] 2025-10-12 07:44:59,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:45:18] 2025-10-12 07:45:12,604 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:45:18] 2025-10-12 07:45:13,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386549282624)>', '<ExcThread(monitor, started 140385795942144)>']
[2025-10-12 03:45:18] 2025-10-12 07:45:17,760 | INFO     | PID=25119 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 03:45:18] 2025-10-12 07:45:17,767 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:45:18] 2025-10-12 07:45:17,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:45:18] 2025-10-12 07:45:17,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:45:18] 2025-10-12 07:45:17,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:45:18] 2025-10-12 07:45:17,767 | INFO     | [monitor] control thread has ended
[2025-10-12 03:45:18] 2025-10-12 07:45:18,401 | INFO     | all workflow threads have been joined
[2025-10-12 03:45:18] 2025-10-12 07:45:18,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:45:18] 2025-10-12 07:45:18,402 | INFO     | traces error code: 0
[2025-10-12 03:45:18] 2025-10-12 07:45:18,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:45:18] 2025-10-12 07:45:18,514 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:45:18] 2025-10-12 07:45:18,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:45:18] 2025-10-12 07:45:18,523 [wrapper] pilotpid: 25119
[2025-10-12 03:45:18] 2025-10-12 07:45:18,528 [wrapper] Pilot exit status: 0
[2025-10-12 03:45:18] 2025-10-12 07:45:18,545 [wrapper] pandaids: 6839164167
[2025-10-12 03:45:18] 2025-10-12 07:45:18,587 [wrapper] cleanup supervisor_pilot 30898 25120
[2025-10-12 03:45:18] 2025-10-12 07:45:18,591 [wrapper] Test setup, not cleaning
[2025-10-12 03:45:18] 2025-10-12 07:45:18,596 [wrapper] apfmon messages muted
[2025-10-12 03:45:18] 2025-10-12 07:45:18,601 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:45:18] 2025-10-12 07:45:18,605 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:45:18]  *** Error codes and diagnostics ***
[2025-10-12 03:45:18]     "exeErrorCode": 0,
[2025-10-12 03:45:18]     "exeErrorDiag": "",
[2025-10-12 03:45:18]     "pilotErrorCode": 0,
[2025-10-12 03:45:18]     "pilotErrorDiag": "",
[2025-10-12 03:45:18]  *** Listing of results directory ***
[2025-10-12 03:45:18] total 416284
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:33 queuedata.json
[2025-10-12 03:45:18] -rwx------ 1 boincer umatlas     36292 Oct 11 20:34 runpilot2-wrapper.sh
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas       100 Oct 12 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:45:18] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 01:35 run_atlas
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas       105 Oct 12 01:35 job.xml
[2025-10-12 03:45:18] -rw-r--r-- 2 boincer umatlas 220658860 Oct 12 01:35 EVNT.46676267._002972.pool.root.1
[2025-10-12 03:45:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:35 start_atlas.sh
[2025-10-12 03:45:18] drwxrwx--x 2 boincer umatlas      4096 Oct 12 01:35 shared
[2025-10-12 03:45:18] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 01:35 input.tar.gz
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas         0 Oct 12 01:35 boinc_lockfile
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 01:35 pandaJob.out
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas    975528 Oct 12 01:35 agis_schedconf.cvmfs.json
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas   1560580 Oct 12 01:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:45:18] drwx------ 5 boincer umatlas      4096 Oct 12 01:36 pilot3
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas      5908 Oct 12 03:36 init_data.xml
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas 198824732 Oct 12 03:44 HITS.46676269._067756.pool.root.1
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas       529 Oct 12 03:44 boinc_task_state.xml
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas      1049 Oct 12 03:44 memory_monitor_summary.json
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas    364068 Oct 12 03:44 log.46676269._067756.job.log.tgz.1
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas      7848 Oct 12 03:44 heartbeat.json
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 03:45 boinc_mmap_file
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas        27 Oct 12 03:45 wrapper_checkpoint.txt
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas        95 Oct 12 03:45 pilot_heartbeat.json
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas      4818 Oct 12 03:45 pilotlog.txt
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas   1085170 Oct 12 03:45 log.46676269._067756.job.log.1
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas       357 Oct 12 03:45 output.list
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas       620 Oct 12 03:45 runtime_log
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas   1464320 Oct 12 03:45 result.tar.gz
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 03:45 runtime_log.err
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas       658 Oct 12 03:45 rixKDm8DzR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8rSMDm7Vk5Xm.diag
[2025-10-12 03:45:18] -rw-r--r-- 1 boincer umatlas     21305 Oct 12 03:45 stderr.txt
[2025-10-12 03:45:18] HITS file was successfully produced:
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas 198824732 Oct 12 03:44 shared/HITS.pool.root.1
[2025-10-12 03:45:18]  *** Contents of shared directory: ***
[2025-10-12 03:45:18] total 411664
[2025-10-12 03:45:18] -rw-r--r-- 2 boincer umatlas 220658860 Oct 12 01:35 ATLAS.root_0
[2025-10-12 03:45:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:35 start_atlas.sh
[2025-10-12 03:45:18] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 01:35 input.tar.gz
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas 198824732 Oct 12 03:44 HITS.pool.root.1
[2025-10-12 03:45:18] -rw------- 1 boincer umatlas   1464320 Oct 12 03:45 result.tar.gz
03:45:20 (21376): run_atlas exited; CPU time 56376.366727
03:45:20 (21376): called boinc_finish(0)

</stderr_txt>
]]>

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