Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:20 (1191224): wrapper (7.7.26015): starting
17:30:20 (1191224): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 17:30:20] Arguments: --nthreads 4
[2025-10-13 17:30:20] Threads: 4
[2025-10-13 17:30:20] Checking for CVMFS
[2025-10-13 17:30:20] No cvmfs_config command found, will try listing directly
[2025-10-13 17:30:20] CVMFS is ok
[2025-10-13 17:30:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:30:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:30:20] Further information can be found at the LHC@home message board.
[2025-10-13 17:30:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:30:20] Checking for apptainer binary...
[2025-10-13 17:30:20] which: no apptainer in ((null))
[2025-10-13 17:30:20] apptainer is not installed, using version from CVMFS
[2025-10-13 17:30:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:30:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-13 17:30:20] apptainer works
[2025-10-13 17:30:20] Set ATHENA_PROC_NUMBER=4
[2025-10-13 17:30:20] Set ATHENA_CORE_NUMBER=4
[2025-10-13 17:30:20] Starting ATLAS job with PandaID=6839319357
[2025-10-13 17:30:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:47:40 (1259363): wrapper (7.7.26015): starting
18:47:40 (1259363): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:47:40] Arguments: --nthreads 4
[2025-10-13 18:47:40] Threads: 4
[2025-10-13 18:47:40] This job has been restarted, cleaning up previous attempt
[2025-10-13 18:47:40] Checking for CVMFS
[2025-10-13 18:47:40] No cvmfs_config command found, will try listing directly
[2025-10-13 18:47:41] CVMFS is ok
[2025-10-13 18:47:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:47:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:47:41] Further information can be found at the LHC@home message board.
[2025-10-13 18:47:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:47:41] Checking for apptainer binary...
[2025-10-13 18:47:41] which: no apptainer in ((null))
[2025-10-13 18:47:41] apptainer is not installed, using version from CVMFS
[2025-10-13 18:47:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:47:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-13 18:47:41] apptainer works
[2025-10-13 18:47:41] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:47:41] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:47:41] Starting ATLAS job with PandaID=6839319357
[2025-10-13 18:47:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:55:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:55:25] 2025-10-13 19:32:57,307 | INFO     | monitor loop #721: job 0:6839319357 is in state 'finished'
[2025-10-13 22:55:25] 2025-10-13 19:32:57,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 22:55:25] 2025-10-13 19:32:57,772 | INFO     | time since job start (9904s) is within the limit (172800.0s)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,089 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 22:55:25] 2025-10-13 19:32:58,099 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2699.972312500001
[2025-10-13 22:55:25] 2025-10-13 19:32:58,112 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6839319357/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,113 | INFO     | extracted standard info from prmon json
[2025-10-13 22:55:25] 2025-10-13 19:32:58,113 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 22:55:25] 2025-10-13 19:32:58,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 22:55:25] 2025-10-13 19:32:58,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 22:55:25] 2025-10-13 19:32:58,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 22:55:25] 2025-10-13 19:32:58,118 | INFO     | fitting pss+swap vs Time
[2025-10-13 22:55:25] 2025-10-13 19:32:58,118 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 22:55:25] 2025-10-13 19:32:58,119 | INFO     | sum of deviations: -17359897127.5
[2025-10-13 22:55:25] 2025-10-13 19:32:58,119 | INFO     | mean x: 1760379010.5
[2025-10-13 22:55:25] 2025-10-13 19:32:58,119 | INFO     | mean y: 2370406.141975309
[2025-10-13 22:55:25] 2025-10-13 19:32:58,119 | INFO     | -- intersect: 23184130659.56123
[2025-10-13 22:55:25] 2025-10-13 19:32:58,119 | INFO     | intersect: 23184130659.56123
[2025-10-13 22:55:25] 2025-10-13 19:32:58,120 | INFO     | chi2: 1.5176864395118923
[2025-10-13 22:55:25] 2025-10-13 19:32:58,120 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,121 | INFO     | sum of deviations: -16499118167.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,121 | INFO     | mean x: 1760378858.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,121 | INFO     | mean y: 2371515.7770700636
[2025-10-13 22:55:25] 2025-10-13 19:32:58,122 | INFO     | -- intersect: 24207484566.403255
[2025-10-13 22:55:25] 2025-10-13 19:32:58,122 | INFO     | intersect: 24207484566.403255
[2025-10-13 22:55:25] 2025-10-13 19:32:58,122 | INFO     | chi2: 1.5147533192626361
[2025-10-13 22:55:25] 2025-10-13 19:32:58,122 | INFO     | current chi2=1.5147533192626361 (change=0.19326259844553345 %)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,122 | INFO     | right removable region: 156
[2025-10-13 22:55:25] 2025-10-13 19:32:58,122 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,123 | INFO     | sum of deviations: -31356944470.000008
[2025-10-13 22:55:25] 2025-10-13 19:32:58,123 | INFO     | mean x: 1760379163.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,124 | INFO     | mean y: 2387941.5031847134
[2025-10-13 22:55:25] 2025-10-13 19:32:58,124 | INFO     | -- intersect: 46004756652.29276
[2025-10-13 22:55:25] 2025-10-13 19:32:58,124 | INFO     | intersect: 46004756652.29276
[2025-10-13 22:55:25] 2025-10-13 19:32:58,124 | INFO     | chi2: 0.30295072629279257
[2025-10-13 22:55:25] 2025-10-13 19:32:58,124 | INFO     | current chi2=0.30295072629279257 (change=80.0386484055148 %)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,124 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,125 | INFO     | sum of deviations: -22714599798.500004
[2025-10-13 22:55:25] 2025-10-13 19:32:58,125 | INFO     | mean x: 1760379315.5
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | mean y: 2376061.427631579
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | -- intersect: 36723922015.42455
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | intersect: 36723922015.42455
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | chi2: 0.2533111685412282
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | current chi2=0.2533111685412282 (change=16.385356905726397 %)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | left removable region: 20
[2025-10-13 22:55:25] 2025-10-13 19:32:58,126 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,127 | INFO     | sum of deviations: -3771215230.4999995
[2025-10-13 22:55:25] 2025-10-13 19:32:58,127 | INFO     | mean x: 1760379437.5
[2025-10-13 22:55:25] 2025-10-13 19:32:58,127 | INFO     | mean y: 2348292.345588235
[2025-10-13 22:55:25] 2025-10-13 19:32:58,128 | INFO     | -- intersect: 8514041039.503636
[2025-10-13 22:55:25] 2025-10-13 19:32:58,128 | INFO     | intersect: 8514041039.503636
[2025-10-13 22:55:25] 2025-10-13 19:32:58,128 | INFO     | chi2: 0.04324440263845938
[2025-10-13 22:55:25] 2025-10-13 19:32:58,128 | INFO     | -- intersect: 8514041039.503636
[2025-10-13 22:55:25] 2025-10-13 19:32:58,128 | INFO     | current memory leak: -4.84 B/s (using 136 data points, chi2=0.04)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | could have reported an average CPU frequency of 2732 MHz (9 samples)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | ..............................
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . Timing measurements:
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . get job = 0 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . initial setup = 1 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . payload setup = 6 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . stage-in = 0 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . payload execution = 9872 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,129 | INFO     | . stage-out = 1 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,130 | INFO     | . log creation = 0 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,130 | INFO     | ..............................
[2025-10-13 22:55:25] 2025-10-13 19:32:58,288 | INFO     | 
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | job summary report
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | --------------------------------------------------
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | PanDA job id: 6839319357
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | task id: 46676269
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | errors: (none)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | pilot state: finished 
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | transexitcode: 0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | exeerrorcode: 0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,289 | INFO     | exeerrordiag: 
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | exitcode: 0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | exitmsg: OK
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | cpuconsumptiontime: 38059 s
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | nevents: 400
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | neventsw: 0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | pid: 1270871
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | pgrp: 1270871
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | corecount: 4
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | event service: False
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | sizes: {0: 2348752, 1: 2348894, 5: 2349156, 11: 2349212, 9882: 2377849, 9884: 2386869, 9885: 2387053, 9889: 2387311}
[2025-10-13 22:55:25] 2025-10-13 19:32:58,290 | INFO     | --------------------------------------------------
[2025-10-13 22:55:25] 2025-10-13 19:32:58,291 | INFO     | 
[2025-10-13 22:55:25] 2025-10-13 19:32:58,291 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-10-13 22:55:25] 2025-10-13 19:32:58,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 22:55:25] 2025-10-13 19:32:58,316 | INFO     | job 6839319357 has completed (purged errors)
[2025-10-13 22:55:25] 2025-10-13 19:32:58,316 | INFO     | overall cleanup function is called
[2025-10-13 22:55:25] 2025-10-13 19:32:59,320 | INFO     | --- collectZombieJob: --- 10, [1270871]
[2025-10-13 22:55:25] 2025-10-13 19:32:59,320 | INFO     | zombie collector waiting for pid 1270871
[2025-10-13 22:55:25] 2025-10-13 19:32:59,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 22:55:25] 2025-10-13 19:32:59,321 | INFO     | collected zombie processes
[2025-10-13 22:55:25] 2025-10-13 19:32:59,321 | INFO     | will attempt to kill all subprocesses of pid=1270871
[2025-10-13 22:55:25] 2025-10-13 19:32:59,716 | INFO     | process IDs to be killed: [1270871] (in reverse order)
[2025-10-13 22:55:25] 2025-10-13 19:32:59,834 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 22:55:25] 2025-10-13 19:32:59,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 22:55:25] 2025-10-13 19:32:59,848 | INFO     | did not find any defunct processes belonging to 1270871
[2025-10-13 22:55:25] 2025-10-13 19:32:59,861 | INFO     | did not find any defunct processes belonging to 1270871
[2025-10-13 22:55:25] 2025-10-13 19:32:59,861 | INFO     | ready for new job
[2025-10-13 22:55:25] 2025-10-13 19:32:59,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 22:55:25] 2025-10-13 19:32:59,864 | INFO     | ***************************************
[2025-10-13 22:55:25] 2025-10-13 19:32:59,864 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 22:55:25] 2025-10-13 19:32:59,864 | INFO     | ***************************************
[2025-10-13 22:55:25] 2025-10-13 19:32:59,864 | INFO     | 
[2025-10-13 22:55:25] 2025-10-13 19:32:59,868 | INFO     | architecture information:
[2025-10-13 22:55:25] 2025-10-13 19:32:59,869 | INFO     | executing command: cat /etc/os-release
[2025-10-13 22:55:25] 2025-10-13 19:32:59,885 | INFO     | cat /etc/os-release:
[2025-10-13 22:55:25] NAME="CentOS Linux"
[2025-10-13 22:55:25] VERSION="7 (Core)"
[2025-10-13 22:55:25] ID="centos"
[2025-10-13 22:55:25] ID_LIKE="rhel fedora"
[2025-10-13 22:55:25] VERSION_ID="7"
[2025-10-13 22:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 22:55:25] ANSI_COLOR="0;31"
[2025-10-13 22:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 22:55:25] HOME_URL="https://www.centos.org/"
[2025-10-13 22:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 22:55:25] 
[2025-10-13 22:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 22:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 22:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 22:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 22:55:25] 
[2025-10-13 22:55:25] 2025-10-13 19:32:59,886 | INFO     | ***************************************
[2025-10-13 22:55:25] 2025-10-13 19:33:00,389 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-10-13 22:55:25] 2025-10-13 19:33:00,406 | INFO     | sufficient remaining disk space (695654678528 B)
[2025-10-13 22:55:25] 2025-10-13 19:33:00,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 22:55:25] 2025-10-13 19:33:00,406 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 22:55:25] 2025-10-13 19:33:00,406 | INFO     | update_server=False
[2025-10-13 22:55:25] 2025-10-13 19:33:00,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 22:55:25] 2025-10-13 19:33:00,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:55:25] 2025-10-13 19:33:00,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 22:55:25] 2025-10-13 19:33:00,510 | INFO     | all data control threads have been joined
[2025-10-13 22:55:25] 2025-10-13 19:33:00,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:55:25] 2025-10-13 19:33:00,813 | INFO     | aborting loop
[2025-10-13 22:55:25] 2025-10-13 19:33:01,411 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:01,428 | INFO     | all payload control threads have been joined
[2025-10-13 22:55:25] 2025-10-13 19:33:01,515 | INFO     | [data] control thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:01,732 | INFO     | all job control threads have been joined
[2025-10-13 22:55:25] 2025-10-13 19:33:01,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:01,818 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:01,908 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,405 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,430 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,434 | INFO     | [payload] control thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,559 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,587 | INFO     | [job] validate thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,736 | INFO     | [job] control thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,784 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,803 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:02,899 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:03,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:55:25] 2025-10-13 19:33:04,249 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:04,410 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:55:25] 2025-10-13 19:33:08,681 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:55:25] 2025-10-13 19:33:10,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23135171856192)>', '<ExcThread(monitor, started 23134939875072)>']
[2025-10-13 22:55:25] 2025-10-13 19:33:15,756 | INFO     | all workflow threads have been joined
[2025-10-13 22:55:25] 2025-10-13 19:33:15,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:55:25] 2025-10-13 19:33:15,757 | INFO     | traces error code: 0
[2025-10-13 22:55:25] 2025-10-13 19:33:15,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:55:25] 2025-10-13 19:33:31,368 | INFO     | PID=1263677 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 22:55:25] 2025-10-13 19:33:31,368 | INFO     | .. there are 4 such processes running
[2025-10-13 22:55:25] 2025-10-13 19:33:31,368 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:55:25] 2025-10-13 19:33:31,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:55:25] 2025-10-13 19:33:31,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:55:25] 2025-10-13 19:33:31,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:55:25] 2025-10-13 19:33:31,369 | INFO     | [monitor] control thread has ended
[2025-10-13 22:55:25] 2025-10-13 19:33:31,511 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:55:25] 2025-10-13 19:33:31,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:55:25] 2025-10-13 19:33:31,517 [wrapper] pilotpid: 1263677
[2025-10-13 22:55:25] 2025-10-13 19:33:31,519 [wrapper] Pilot exit status: 0
[2025-10-13 22:55:25] 2025-10-13 19:33:31,530 [wrapper] pandaids: 6839319357 6839319357
[2025-10-13 22:55:25] 2025-10-13 19:33:31,606 [wrapper] cleanup supervisor_pilot 1534976 1263678
[2025-10-13 22:55:25] 2025-10-13 19:33:31,609 [wrapper] Test setup, not cleaning
[2025-10-13 22:55:25] 2025-10-13 19:33:31,612 [wrapper] apfmon messages muted
[2025-10-13 22:55:25] 2025-10-13 19:33:31,615 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:55:25] 2025-10-13 19:33:31,618 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:55:25]  *** Error codes and diagnostics ***
[2025-10-13 22:55:25]     "exeErrorCode": 0,
[2025-10-13 22:55:25]     "exeErrorDiag": "",
[2025-10-13 22:55:25]     "pilotErrorCode": 0,
[2025-10-13 22:55:25]     "pilotErrorDiag": "",
[2025-10-13 22:55:25]  *** Listing of results directory ***
[2025-10-13 22:55:25] total 631716
[2025-10-13 22:55:25] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:18 pilot3.tar.gz
[2025-10-13 22:55:25] -rwx------ 1 boinc boinc     36292 Oct 12 05:20 runpilot2-wrapper.sh
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:20 queuedata.json
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:55:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:30 run_atlas
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:30 job.xml
[2025-10-13 22:55:25] -rw-r--r-- 3 boinc boinc 220528641 Oct 13 17:30 EVNT.46676267._003217.pool.root.1
[2025-10-13 22:55:25] -rw-r--r-- 3 boinc boinc 220528641 Oct 13 17:30 ATLAS.root_0
[2025-10-13 22:55:25] -rw-r--r-- 2 boinc boinc    569679 Oct 13 17:30 input.tar.gz
[2025-10-13 22:55:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:30 start_atlas.sh
[2025-10-13 22:55:25] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:30 shared
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:30 boinc_lockfile
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc      6641 Oct 13 18:47 init_data.xml
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc      2549 Oct 13 18:47 pandaJob.out
[2025-10-13 22:55:25] -rw------- 1 boinc boinc    972783 Oct 13 18:47 agis_schedconf.cvmfs.json
[2025-10-13 22:55:25] -rw------- 1 boinc boinc 198440226 Oct 13 21:32 HITS.46676269._070059.pool.root.1
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc       528 Oct 13 21:32 boinc_task_state.xml
[2025-10-13 22:55:25] -rw------- 1 boinc boinc        97 Oct 13 21:32 pilot_heartbeat.json
[2025-10-13 22:55:25] -rw------- 1 boinc boinc      1051 Oct 13 21:32 memory_monitor_summary.json
[2025-10-13 22:55:25] -rw------- 1 boinc boinc   1560580 Oct 13 21:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:55:25] -rw------- 1 boinc boinc    333277 Oct 13 21:32 log.46676269._070059.job.log.tgz.1
[2025-10-13 22:55:25] -rw------- 1 boinc boinc      7857 Oct 13 21:32 heartbeat.json
[2025-10-13 22:55:25] -rw------- 1 boinc boinc       822 Oct 13 21:33 pilotlog.txt
[2025-10-13 22:55:25] -rw------- 1 boinc boinc   1402013 Oct 13 21:33 log.46676269._070059.job.log.1
[2025-10-13 22:55:25] -rw------- 1 boinc boinc       357 Oct 13 21:33 output.list
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:33 runtime_log
[2025-10-13 22:55:25] -rw------- 1 boinc boinc   1751040 Oct 13 21:33 result.tar.gz
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc      9146 Oct 13 21:33 runtime_log.err
[2025-10-13 22:55:25] -rw------- 1 boinc boinc       793 Oct 13 21:33 LCHODmMo1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBTiNDmxwRqCn.diag
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc        26 Oct 13 22:55 wrapper_checkpoint.txt
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:55 boinc_mmap_file
[2025-10-13 22:55:25] -rw-r--r-- 1 boinc boinc     22833 Oct 13 22:55 stderr.txt
[2025-10-13 22:55:25] HITS file was successfully produced:
[2025-10-13 22:55:25] -rw------- 1 boinc boinc 198440226 Oct 13 21:32 shared/HITS.pool.root.1
[2025-10-13 22:55:25]  *** Contents of shared directory: ***
[2025-10-13 22:55:25] total 411452
[2025-10-13 22:55:25] -rw-r--r-- 3 boinc boinc 220528641 Oct 13 17:30 ATLAS.root_0
[2025-10-13 22:55:25] -rw-r--r-- 2 boinc boinc    569679 Oct 13 17:30 input.tar.gz
[2025-10-13 22:55:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:30 start_atlas.sh
[2025-10-13 22:55:25] -rw------- 1 boinc boinc 198440226 Oct 13 21:32 HITS.pool.root.1
[2025-10-13 22:55:25] -rw------- 1 boinc boinc   1751040 Oct 13 21:33 result.tar.gz
22:55:27 (1259363): run_atlas exited; CPU time 38504.734568
22:55:27 (1259363): called boinc_finish(0)

</stderr_txt>
]]>

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