Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:16:43 (1450700): wrapper (7.7.26015): starting
18:16:43 (1450700): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:16:43] Arguments: --nthreads 4
[2025-10-13 18:16:43] Threads: 4
[2025-10-13 18:16:43] Checking for CVMFS
[2025-10-13 18:16:43] No cvmfs_config command found, will try listing directly
[2025-10-13 18:16:43] CVMFS is ok
[2025-10-13 18:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:16:43] Further information can be found at the LHC@home message board.
[2025-10-13 18:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:16:43] Checking for apptainer binary...
[2025-10-13 18:16:43] which: no apptainer in ((null))
[2025-10-13 18:16:43] apptainer is not installed, using version from CVMFS
[2025-10-13 18:16:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:16:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-13 18:16:44] apptainer works
[2025-10-13 18:16:44] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:16:44] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:16:44] Starting ATLAS job with PandaID=6839163979
[2025-10-13 18:16:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:56:49 (1491614): wrapper (7.7.26015): starting
18:56:49 (1491614): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:56:49] Arguments: --nthreads 4
[2025-10-13 18:56:49] Threads: 4
[2025-10-13 18:56:49] This job has been restarted, cleaning up previous attempt
[2025-10-13 18:56:49] Checking for CVMFS
[2025-10-13 18:56:49] No cvmfs_config command found, will try listing directly
[2025-10-13 18:56:50] CVMFS is ok
[2025-10-13 18:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:56:50] Further information can be found at the LHC@home message board.
[2025-10-13 18:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:56:50] Checking for apptainer binary...
[2025-10-13 18:56:50] which: no apptainer in ((null))
[2025-10-13 18:56:50] apptainer is not installed, using version from CVMFS
[2025-10-13 18:56:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:56:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-13 18:56:50] apptainer works
[2025-10-13 18:56:50] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:56:50] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:56:50] Starting ATLAS job with PandaID=6839163979
[2025-10-13 18:56:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:53:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:53:57] 2025-10-13 19:49:37,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:53:57] 2025-10-13 19:49:37,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:53:57] 2025-10-13 19:49:37,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:53:57] 2025-10-13 19:49:37,741 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:53:57] 2025-10-13 19:49:37,741 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 21:53:57] 2025-10-13 19:49:37,742 | INFO     | sum of deviations: 3723242237.9999924
[2025-10-13 21:53:57] 2025-10-13 19:49:37,743 | INFO     | mean x: 1760379802.5
[2025-10-13 21:53:57] 2025-10-13 19:49:37,743 | INFO     | mean y: 2313738.188235294
[2025-10-13 21:53:57] 2025-10-13 19:49:37,743 | INFO     | -- intersect: -4300152880.979384
[2025-10-13 21:53:57] 2025-10-13 19:49:37,743 | INFO     | intersect: -4300152880.979384
[2025-10-13 21:53:57] 2025-10-13 19:49:37,743 | INFO     | chi2: 2.0606000338228343
[2025-10-13 21:53:57] 2025-10-13 19:49:37,744 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | sum of deviations: 14023695772.000004
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | mean x: 1760379650.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | mean y: 2325480.56969697
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | -- intersect: -17721379682.882202
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | intersect: -17721379682.882202
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | chi2: 1.2775648707531921
[2025-10-13 21:53:57] 2025-10-13 19:49:37,745 | INFO     | current chi2=1.2775648707531921 (change=38.00034699683819 %)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,746 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | sum of deviations: 13509487213.5
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | mean x: 1760379497.5
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | mean y: 2324841.73125
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | -- intersect: -18722758505.57039
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | intersect: -18722758505.57039
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | chi2: 1.2786960119440431
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | current chi2=1.2786960119440431 (change=-0.08853884579529306 %)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,747 | INFO     | right removable region: 159
[2025-10-13 21:53:57] 2025-10-13 19:49:37,748 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,749 | INFO     | sum of deviations: -14915655157.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,749 | INFO     | mean x: 1760379955.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,749 | INFO     | mean y: 2335121.6303030304
[2025-10-13 21:53:57] 2025-10-13 19:49:37,749 | INFO     | -- intersect: 18853337341.233494
[2025-10-13 21:53:57] 2025-10-13 19:49:37,749 | INFO     | intersect: 18853337341.233494
[2025-10-13 21:53:57] 2025-10-13 19:49:37,749 | INFO     | chi2: 0.8458948978994587
[2025-10-13 21:53:57] 2025-10-13 19:49:37,750 | INFO     | current chi2=0.8458948978994587 (change=58.94909812603707 %)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,750 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,751 | INFO     | sum of deviations: -11116829191.5
[2025-10-13 21:53:57] 2025-10-13 19:49:37,751 | INFO     | mean x: 1760380107.5
[2025-10-13 21:53:57] 2025-10-13 19:49:37,751 | INFO     | mean y: 2330378.08125
[2025-10-13 21:53:57] 2025-10-13 19:49:37,751 | INFO     | -- intersect: 15411029613.724903
[2025-10-13 21:53:57] 2025-10-13 19:49:37,751 | INFO     | intersect: 15411029613.724903
[2025-10-13 21:53:57] 2025-10-13 19:49:37,751 | INFO     | chi2: 0.8285526754081638
[2025-10-13 21:53:57] 2025-10-13 19:49:37,752 | INFO     | current chi2=0.8285526754081638 (change=2.05016279615345 %)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,752 | INFO     | left removable region: 20
[2025-10-13 21:53:57] 2025-10-13 19:49:37,752 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,753 | INFO     | sum of deviations: 2304069613.0000005
[2025-10-13 21:53:57] 2025-10-13 19:49:37,753 | INFO     | mean x: 1760380077.0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,753 | INFO     | mean y: 2338163.330935252
[2025-10-13 21:53:57] 2025-10-13 19:49:37,753 | INFO     | -- intersect: -4868477509.804941
[2025-10-13 21:53:57] 2025-10-13 19:49:37,753 | INFO     | intersect: -4868477509.804941
[2025-10-13 21:53:57] 2025-10-13 19:49:37,753 | INFO     | chi2: 0.00025157194334522964
[2025-10-13 21:53:57] 2025-10-13 19:49:37,754 | INFO     | -- intersect: -4868477509.804941
[2025-10-13 21:53:57] 2025-10-13 19:49:37,754 | INFO     | current memory leak: 2.77 B/s (using 139 data points, chi2=0.00)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,754 | INFO     | could have reported an average CPU frequency of 2719 MHz (9 samples)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | ..............................
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . Timing measurements:
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . get job = 0 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . initial setup = 1 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . payload setup = 6 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . stage-in = 0 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . payload execution = 10325 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . stage-out = 1 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | . log creation = 0 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,755 | INFO     | ..............................
[2025-10-13 21:53:57] 2025-10-13 19:49:37,851 | INFO     | 
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | job summary report
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | --------------------------------------------------
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | PanDA job id: 6839163979
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | task id: 46676269
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | errors: (none)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | pilot state: finished 
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | transexitcode: 0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | exeerrorcode: 0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,852 | INFO     | exeerrordiag: 
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | exitcode: 0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | exitmsg: OK
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | cpuconsumptiontime: 39833 s
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | nevents: 400
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | neventsw: 0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | pid: 1513045
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | pgrp: 1513045
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | corecount: 4
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | event service: False
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | sizes: {0: 2348646, 1: 2348845, 5: 2349107, 11: 2349163, 10334: 2377997, 10335: 2387201, 10340: 2387403}
[2025-10-13 21:53:57] 2025-10-13 19:49:37,853 | INFO     | --------------------------------------------------
[2025-10-13 21:53:57] 2025-10-13 19:49:37,854 | INFO     | 
[2025-10-13 21:53:57] 2025-10-13 19:49:37,854 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-10-13 21:53:57] 2025-10-13 19:49:37,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:53:57] 2025-10-13 19:49:37,878 | INFO     | job 6839163979 has completed (purged errors)
[2025-10-13 21:53:57] 2025-10-13 19:49:37,879 | INFO     | overall cleanup function is called
[2025-10-13 21:53:57] 2025-10-13 19:49:38,887 | INFO     | --- collectZombieJob: --- 10, [1513045]
[2025-10-13 21:53:57] 2025-10-13 19:49:38,887 | INFO     | zombie collector waiting for pid 1513045
[2025-10-13 21:53:57] 2025-10-13 19:49:38,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:53:57] 2025-10-13 19:49:38,887 | INFO     | collected zombie processes
[2025-10-13 21:53:57] 2025-10-13 19:49:38,887 | INFO     | will attempt to kill all subprocesses of pid=1513045
[2025-10-13 21:53:57] 2025-10-13 19:49:39,316 | INFO     | process IDs to be killed: [1513045] (in reverse order)
[2025-10-13 21:53:57] 2025-10-13 19:49:39,429 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:53:57] 2025-10-13 19:49:39,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:53:57] 2025-10-13 19:49:39,442 | INFO     | did not find any defunct processes belonging to 1513045
[2025-10-13 21:53:57] 2025-10-13 19:49:39,454 | INFO     | did not find any defunct processes belonging to 1513045
[2025-10-13 21:53:57] 2025-10-13 19:49:39,454 | INFO     | ready for new job
[2025-10-13 21:53:57] 2025-10-13 19:49:39,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:53:57] 2025-10-13 19:49:39,457 | INFO     | ***************************************
[2025-10-13 21:53:57] 2025-10-13 19:49:39,457 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:53:57] 2025-10-13 19:49:39,457 | INFO     | ***************************************
[2025-10-13 21:53:57] 2025-10-13 19:49:39,457 | INFO     | 
[2025-10-13 21:53:57] 2025-10-13 19:49:39,461 | INFO     | architecture information:
[2025-10-13 21:53:57] 2025-10-13 19:49:39,462 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:53:57] 2025-10-13 19:49:39,478 | INFO     | cat /etc/os-release:
[2025-10-13 21:53:57] NAME="CentOS Linux"
[2025-10-13 21:53:57] VERSION="7 (Core)"
[2025-10-13 21:53:57] ID="centos"
[2025-10-13 21:53:57] ID_LIKE="rhel fedora"
[2025-10-13 21:53:57] VERSION_ID="7"
[2025-10-13 21:53:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:53:57] ANSI_COLOR="0;31"
[2025-10-13 21:53:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:53:57] HOME_URL="https://www.centos.org/"
[2025-10-13 21:53:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:53:57] 
[2025-10-13 21:53:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:53:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:53:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:53:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:53:57] 
[2025-10-13 21:53:57] 2025-10-13 19:49:39,479 | INFO     | ***************************************
[2025-10-13 21:53:57] 2025-10-13 19:49:39,982 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-10-13 21:53:57] 2025-10-13 19:49:40,003 | INFO     | sufficient remaining disk space (691820036096 B)
[2025-10-13 21:53:57] 2025-10-13 19:49:40,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:53:57] 2025-10-13 19:49:40,003 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:53:57] 2025-10-13 19:49:40,003 | INFO     | update_server=False
[2025-10-13 21:53:57] 2025-10-13 19:49:40,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:53:57] 2025-10-13 19:49:40,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:53:57] 2025-10-13 19:49:40,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:53:57] 2025-10-13 19:49:40,005 | INFO     | aborting loop
[2025-10-13 21:53:57] 2025-10-13 19:49:40,033 | INFO     | all data control threads have been joined
[2025-10-13 21:53:57] 2025-10-13 19:49:41,009 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:53:57] 2025-10-13 19:49:41,010 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,015 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,036 | INFO     | [data] control thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,239 | INFO     | all job control threads have been joined
[2025-10-13 21:53:57] 2025-10-13 19:49:41,477 | INFO     | all payload control threads have been joined
[2025-10-13 21:53:57] 2025-10-13 19:49:41,586 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,658 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,700 | INFO     | [job] validate thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,769 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,910 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:41,910 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:42,240 | INFO     | [job] control thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:42,460 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:42,483 | INFO     | [payload] control thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:42,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:53:57] 2025-10-13 19:49:43,015 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:43,867 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:49:44,010 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:53:57] 2025-10-13 19:50:10,535 | INFO     | PID=1498497 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:53:57] 2025-10-13 19:50:10,536 | INFO     | .. there are 4 such processes running
[2025-10-13 21:53:57] 2025-10-13 19:50:10,537 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:53:57] 2025-10-13 19:50:10,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:53:57] 2025-10-13 19:50:10,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:53:57] 2025-10-13 19:50:17,924 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:53:57] 2025-10-13 19:50:18,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23251908638528)>', '<ExcThread(monitor, started 23251466036992)>']
[2025-10-13 21:53:57] 2025-10-13 19:50:19,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:53:57] 2025-10-13 19:50:19,579 | INFO     | [monitor] control thread has ended
[2025-10-13 21:53:57] 2025-10-13 19:50:23,956 | INFO     | all workflow threads have been joined
[2025-10-13 21:53:57] 2025-10-13 19:50:23,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:53:57] 2025-10-13 19:50:23,957 | INFO     | traces error code: 0
[2025-10-13 21:53:57] 2025-10-13 19:50:23,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:53:57] 2025-10-13 19:50:24,104 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:53:57] 2025-10-13 19:50:24,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:53:57] 2025-10-13 19:50:24,108 [wrapper] pilotpid: 1498497
[2025-10-13 21:53:57] 2025-10-13 19:50:24,111 [wrapper] Pilot exit status: 0
[2025-10-13 21:53:57] 2025-10-13 19:50:24,120 [wrapper] pandaids: 6839163979 6839163979
[2025-10-13 21:53:57] 2025-10-13 19:50:24,193 [wrapper] cleanup supervisor_pilot 1760083 1498498
[2025-10-13 21:53:57] 2025-10-13 19:50:24,196 [wrapper] Test setup, not cleaning
[2025-10-13 21:53:57] 2025-10-13 19:50:24,199 [wrapper] apfmon messages muted
[2025-10-13 21:53:57] 2025-10-13 19:50:24,202 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:53:57] 2025-10-13 19:50:24,204 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:53:57]  *** Error codes and diagnostics ***
[2025-10-13 21:53:57]     "exeErrorCode": 0,
[2025-10-13 21:53:57]     "exeErrorDiag": "",
[2025-10-13 21:53:57]     "pilotErrorCode": 0,
[2025-10-13 21:53:57]     "pilotErrorDiag": "",
[2025-10-13 21:53:57]  *** Listing of results directory ***
[2025-10-13 21:53:57] total 627492
[2025-10-13 21:53:57] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:27 queuedata.json
[2025-10-13 21:53:57] -rwx------ 1 boinc boinc     36292 Oct 12 02:28 runpilot2-wrapper.sh
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:53:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:27 run_atlas
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:27 job.xml
[2025-10-13 21:53:57] -rw-r--r-- 3 boinc boinc 221667143 Oct 13 18:16 EVNT.46676267._002777.pool.root.1
[2025-10-13 21:53:57] -rw-r--r-- 3 boinc boinc 221667143 Oct 13 18:16 ATLAS.root_0
[2025-10-13 21:53:57] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:16 start_atlas.sh
[2025-10-13 21:53:57] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:16 shared
[2025-10-13 21:53:57] -rw-r--r-- 2 boinc boinc    569681 Oct 13 18:16 input.tar.gz
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:16 boinc_lockfile
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc      6637 Oct 13 18:56 init_data.xml
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc      2549 Oct 13 18:56 pandaJob.out
[2025-10-13 21:53:57] -rw------- 1 boinc boinc    972783 Oct 13 18:57 agis_schedconf.cvmfs.json
[2025-10-13 21:53:57] -rw------- 1 boinc boinc 191663791 Oct 13 21:48 HITS.46676269._067683.pool.root.1
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:49 boinc_task_state.xml
[2025-10-13 21:53:57] -rw------- 1 boinc boinc      1043 Oct 13 21:49 memory_monitor_summary.json
[2025-10-13 21:53:57] -rw------- 1 boinc boinc   1560580 Oct 13 21:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:53:57] -rw------- 1 boinc boinc    349762 Oct 13 21:49 log.46676269._067683.job.log.tgz.1
[2025-10-13 21:53:57] -rw------- 1 boinc boinc      7852 Oct 13 21:49 heartbeat.json
[2025-10-13 21:53:57] -rw------- 1 boinc boinc        97 Oct 13 21:50 pilot_heartbeat.json
[2025-10-13 21:53:57] -rw------- 1 boinc boinc      4833 Oct 13 21:50 pilotlog.txt
[2025-10-13 21:53:57] -rw------- 1 boinc boinc   1477814 Oct 13 21:50 log.46676269._067683.job.log.1
[2025-10-13 21:53:57] -rw------- 1 boinc boinc       357 Oct 13 21:50 output.list
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:50 runtime_log
[2025-10-13 21:53:57] -rw------- 1 boinc boinc   1843200 Oct 13 21:50 result.tar.gz
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc      9147 Oct 13 21:50 runtime_log.err
[2025-10-13 21:53:57] -rw------- 1 boinc boinc       795 Oct 13 21:50 DnjKDm57yR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA4hNDmBXDMJn.diag
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc        26 Oct 13 21:53 wrapper_checkpoint.txt
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:53 boinc_mmap_file
[2025-10-13 21:53:57] -rw-r--r-- 1 boinc boinc     22570 Oct 13 21:53 stderr.txt
[2025-10-13 21:53:57] HITS file was successfully produced:
[2025-10-13 21:53:57] -rw------- 1 boinc boinc 191663791 Oct 13 21:48 shared/HITS.pool.root.1
[2025-10-13 21:53:57]  *** Contents of shared directory: ***
[2025-10-13 21:53:57] total 406028
[2025-10-13 21:53:57] -rw-r--r-- 3 boinc boinc 221667143 Oct 13 18:16 ATLAS.root_0
[2025-10-13 21:53:57] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:16 start_atlas.sh
[2025-10-13 21:53:57] -rw-r--r-- 2 boinc boinc    569681 Oct 13 18:16 input.tar.gz
[2025-10-13 21:53:57] -rw------- 1 boinc boinc 191663791 Oct 13 21:48 HITS.pool.root.1
[2025-10-13 21:53:57] -rw------- 1 boinc boinc   1843200 Oct 13 21:50 result.tar.gz
21:53:59 (1491614): run_atlas exited; CPU time 40284.162885
21:53:59 (1491614): called boinc_finish(0)

</stderr_txt>
]]>

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