Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:32:07 (1512802): wrapper (7.7.26015): starting
03:32:07 (1512802): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 03:32:07] Arguments: --nthreads 9
[2025-10-12 03:32:07] Threads: 9
[2025-10-12 03:32:07] Checking for CVMFS
[2025-10-12 03:32:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:32:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:32:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:32:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:32:08] 2.13.2.0 5060 5383 101416 151612 2 131 28023981 40960001 23061 16776704 0 17628570 99.835 7305509 36552 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:32:08] CVMFS is ok
[2025-10-12 03:32:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:32:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:32:08] Further information can be found at the LHC@home message board.
[2025-10-12 03:32:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:32:08] Checking for apptainer binary...
[2025-10-12 03:32:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:32:08] Running /usr/bin/apptainer --version
[2025-10-12 03:32:08] apptainer version 1.4.3-1.el9
[2025-10-12 03:32:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:32:08] c-212-3.aglt2.org
[2025-10-12 03:32:08] apptainer works
[2025-10-12 03:32:08] Set ATHENA_PROC_NUMBER=9
[2025-10-12 03:32:08] Set ATHENA_CORE_NUMBER=9
[2025-10-12 03:32:08] Starting ATLAS job with PandaID=6839163270
[2025-10-12 03:32:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:12:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:12:02] 2025-10-12 12:11:28,253 | INFO     | time since job start (16744s) is within the limit (172800.0s)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,144 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 08:12:02] 2025-10-12 12:11:29,172 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2946.103479166668
[2025-10-12 08:12:02] 2025-10-12 12:11:29,217 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839163270/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,217 | INFO     | extracted standard info from prmon json
[2025-10-12 08:12:02] 2025-10-12 12:11:29,217 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:12:02] 2025-10-12 12:11:29,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:12:02] 2025-10-12 12:11:29,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:12:02] 2025-10-12 12:11:29,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:12:02] 2025-10-12 12:11:29,230 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:12:02] 2025-10-12 12:11:29,230 | INFO     | sum of square deviations: 6378632857.678868
[2025-10-12 08:12:02] 2025-10-12 12:11:29,243 | INFO     | sum of deviations: -835410636.372268
[2025-10-12 08:12:02] 2025-10-12 12:11:29,244 | INFO     | mean x: 1760262702.5547445
[2025-10-12 08:12:02] 2025-10-12 12:11:29,244 | INFO     | mean y: 2560308.3248175182
[2025-10-12 08:12:02] 2025-10-12 12:11:29,244 | INFO     | -- intersect: 233102215.55393896
[2025-10-12 08:12:02] 2025-10-12 12:11:29,244 | INFO     | intersect: 233102215.55393896
[2025-10-12 08:12:02] 2025-10-12 12:11:29,244 | INFO     | chi2: 1.1876030788645464
[2025-10-12 08:12:02] 2025-10-12 12:11:29,244 | INFO     | sum of square deviations: 6035775190.163573
[2025-10-12 08:12:02] 2025-10-12 12:11:29,247 | INFO     | sum of deviations: -900335644.5799348
[2025-10-12 08:12:02] 2025-10-12 12:11:29,247 | INFO     | mean x: 1760262550.055762
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | mean y: 2560279.43866171
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | -- intersect: 265132536.9702456
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | intersect: 265132536.9702456
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | chi2: 1.1875070649155646
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | current chi2=1.1875070649155646 (change=0.008084683400588797 %)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | right removable region: 268
[2025-10-12 08:12:02] 2025-10-12 12:11:29,248 | INFO     | sum of square deviations: 6035766040.163572
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | sum of deviations: -31339876265.516754
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | mean x: 1760262855.055762
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | mean y: 2573718.301115242
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | -- intersect: 9142493938.061289
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | intersect: 9142493938.061289
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | chi2: 0.060606777028489656
[2025-10-12 08:12:02] 2025-10-12 12:11:29,250 | INFO     | current chi2=0.060606777028489656 (change=94.89671438992605 %)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,251 | INFO     | sum of square deviations: 5705411085.147748
[2025-10-12 08:12:02] 2025-10-12 12:11:29,256 | INFO     | sum of deviations: -26397575249.693176
[2025-10-12 08:12:02] 2025-10-12 12:11:29,256 | INFO     | mean x: 1760263007.5568182
[2025-10-12 08:12:02] 2025-10-12 12:11:29,256 | INFO     | mean y: 2571438.412878788
[2025-10-12 08:12:02] 2025-10-12 12:11:29,257 | INFO     | -- intersect: 8146888212.044455
[2025-10-12 08:12:02] 2025-10-12 12:11:29,257 | INFO     | intersect: 8146888212.044455
[2025-10-12 08:12:02] 2025-10-12 12:11:29,257 | INFO     | chi2: 0.055654805155046554
[2025-10-12 08:12:02] 2025-10-12 12:11:29,257 | INFO     | current chi2=0.055654805155046554 (change=8.170657006089122 %)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,257 | INFO     | left removable region: 20
[2025-10-12 08:12:02] 2025-10-12 12:11:29,257 | INFO     | sum of square deviations: 4729657037.09274
[2025-10-12 08:12:02] 2025-10-12 12:11:29,259 | INFO     | sum of deviations: -18462405313.120975
[2025-10-12 08:12:02] 2025-10-12 12:11:29,259 | INFO     | mean x: 1760263129.560484
[2025-10-12 08:12:02] 2025-10-12 12:11:29,262 | INFO     | mean y: 2567829.0080645164
[2025-10-12 08:12:02] 2025-10-12 12:11:29,262 | INFO     | -- intersect: 6873825322.059815
[2025-10-12 08:12:02] 2025-10-12 12:11:29,262 | INFO     | intersect: 6873825322.059815
[2025-10-12 08:12:02] 2025-10-12 12:11:29,262 | INFO     | chi2: 0.04923306418198358
[2025-10-12 08:12:02] 2025-10-12 12:11:29,262 | INFO     | -- intersect: 6873825322.059815
[2025-10-12 08:12:02] 2025-10-12 12:11:29,263 | INFO     | current memory leak: -3.90 B/s (using 248 data points, chi2=0.05)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,263 | INFO     | could have reported an average CPU frequency of 2920 MHz (13 samples)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | ..............................
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . Timing measurements:
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . get job = 0 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . initial setup = 2 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . payload setup = 7 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . stage-in = 0 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . payload execution = 16697 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . stage-out = 3 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | . log creation = 0 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,264 | INFO     | ..............................
[2025-10-12 08:12:02] 2025-10-12 12:11:29,382 | INFO     | 
[2025-10-12 08:12:02] 2025-10-12 12:11:29,382 | INFO     | job summary report
[2025-10-12 08:12:02] 2025-10-12 12:11:29,382 | INFO     | --------------------------------------------------
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | PanDA job id: 6839163270
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | task id: 46676269
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | errors: (none)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | pilot state: finished 
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | transexitcode: 0
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | exeerrorcode: 0
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | exeerrordiag: 
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | exitcode: 0
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | exitmsg: OK
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | cpuconsumptiontime: 39359 s
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | nevents: 400
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | neventsw: 0
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | pid: 1523177
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | pgrp: 1523177
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | corecount: 9
[2025-10-12 08:12:02] 2025-10-12 12:11:29,383 | INFO     | event service: False
[2025-10-12 08:12:02] 2025-10-12 12:11:29,384 | INFO     | sizes: {0: 2348685, 1: 2348884, 6: 2349146, 12: 2349174, 16708: 2381118, 16709: 2381117, 16712: 2390327, 16716: 2390383, 16727: 2390577}
[2025-10-12 08:12:02] 2025-10-12 12:11:29,384 | INFO     | --------------------------------------------------
[2025-10-12 08:12:02] 2025-10-12 12:11:29,384 | INFO     | 
[2025-10-12 08:12:02] 2025-10-12 12:11:29,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 08:12:02] 2025-10-12 12:11:29,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | job 6839163270 has completed (purged errors)
[2025-10-12 08:12:02] 2025-10-12 12:11:29,449 | INFO     | overall cleanup function is called
[2025-10-12 08:12:02] 2025-10-12 12:11:30,463 | INFO     | --- collectZombieJob: --- 10, [1523177]
[2025-10-12 08:12:02] 2025-10-12 12:11:30,463 | INFO     | zombie collector waiting for pid 1523177
[2025-10-12 08:12:02] 2025-10-12 12:11:30,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:12:02] 2025-10-12 12:11:30,464 | INFO     | collected zombie processes
[2025-10-12 08:12:02] 2025-10-12 12:11:30,464 | INFO     | will attempt to kill all subprocesses of pid=1523177
[2025-10-12 08:12:02] 2025-10-12 12:11:30,907 | INFO     | process IDs to be killed: [1523177] (in reverse order)
[2025-10-12 08:12:02] 2025-10-12 12:11:31,037 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:12:02] 2025-10-12 12:11:31,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:12:02] 2025-10-12 12:11:31,054 | INFO     | did not find any defunct processes belonging to 1523177
[2025-10-12 08:12:02] 2025-10-12 12:11:31,071 | INFO     | did not find any defunct processes belonging to 1523177
[2025-10-12 08:12:02] 2025-10-12 12:11:31,071 | INFO     | ready for new job
[2025-10-12 08:12:02] 2025-10-12 12:11:31,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:12:02] 2025-10-12 12:11:31,074 | INFO     | ***************************************
[2025-10-12 08:12:02] 2025-10-12 12:11:31,074 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:12:02] 2025-10-12 12:11:31,074 | INFO     | ***************************************
[2025-10-12 08:12:02] 2025-10-12 12:11:31,074 | INFO     | 
[2025-10-12 08:12:02] 2025-10-12 12:11:31,080 | INFO     | architecture information:
[2025-10-12 08:12:02] 2025-10-12 12:11:31,080 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:12:02] 2025-10-12 12:11:31,099 | INFO     | cat /etc/os-release:
[2025-10-12 08:12:02] NAME="CentOS Linux"
[2025-10-12 08:12:02] VERSION="7 (Core)"
[2025-10-12 08:12:02] ID="centos"
[2025-10-12 08:12:02] ID_LIKE="rhel fedora"
[2025-10-12 08:12:02] VERSION_ID="7"
[2025-10-12 08:12:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:12:02] ANSI_COLOR="0;31"
[2025-10-12 08:12:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:12:02] HOME_URL="https://www.centos.org/"
[2025-10-12 08:12:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:12:02] 
[2025-10-12 08:12:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:12:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:12:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:12:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:12:02] 
[2025-10-12 08:12:02] 2025-10-12 12:11:31,100 | INFO     | ***************************************
[2025-10-12 08:12:02] 2025-10-12 12:11:31,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 08:12:02] 2025-10-12 12:11:31,624 | INFO     | sufficient remaining disk space (127114674176 B)
[2025-10-12 08:12:02] 2025-10-12 12:11:31,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:12:02] 2025-10-12 12:11:31,624 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:12:02] 2025-10-12 12:11:31,624 | INFO     | update_server=False
[2025-10-12 08:12:02] 2025-10-12 12:11:31,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:12:02] 2025-10-12 12:11:31,937 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 08:12:02] 2025-10-12 12:11:31,938 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 08:12:02] 2025-10-12 12:11:31,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:12:02] 2025-10-12 12:11:31,938 | INFO     | will abort loop
[2025-10-12 08:12:02] 2025-10-12 12:11:32,135 | INFO     | all data control threads have been joined
[2025-10-12 08:12:02] 2025-10-12 12:11:32,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:12:02] 2025-10-12 12:11:32,430 | INFO     | all payload control threads have been joined
[2025-10-12 08:12:02] 2025-10-12 12:11:32,630 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:32,688 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:32,913 | INFO     | all job control threads have been joined
[2025-10-12 08:12:02] 2025-10-12 12:11:32,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:12:02] 2025-10-12 12:11:32,944 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:32,952 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,146 | INFO     | [data] control thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,148 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,252 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,357 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,436 | INFO     | [payload] control thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,786 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,809 | INFO     | [job] validate thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:33,919 | INFO     | [job] control thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:34,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:12:02] 2025-10-12 12:11:34,435 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:35,401 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:36,932 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:12:02] 2025-10-12 12:11:52,658 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:12:02] 2025-10-12 12:11:54,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505163519808)>', '<ExcThread(monitor, started 140504528307968)>']
[2025-10-12 08:12:02] 2025-10-12 12:11:59,698 | INFO     | all workflow threads have been joined
[2025-10-12 08:12:02] 2025-10-12 12:11:59,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:12:02] 2025-10-12 12:11:59,699 | INFO     | traces error code: 0
[2025-10-12 08:12:02] 2025-10-12 12:11:59,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:12:02] 2025-10-12 12:12:01,856 | INFO     | PID=1516485 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:12:02] 2025-10-12 12:12:01,857 | INFO     | .. there are 23 such processes running
[2025-10-12 08:12:02] 2025-10-12 12:12:01,857 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:12:02] 2025-10-12 12:12:01,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:12:02] 2025-10-12 12:12:01,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:12:02] 2025-10-12 12:12:01,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:12:02] 2025-10-12 12:12:01,858 | INFO     | [monitor] control thread has ended
[2025-10-12 08:12:02] 2025-10-12 12:12:02,011 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:12:02] 2025-10-12 12:12:02,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:12:02] 2025-10-12 12:12:02,017 [wrapper] pilotpid: 1516485
[2025-10-12 08:12:02] 2025-10-12 12:12:02,023 [wrapper] Pilot exit status: 0
[2025-10-12 08:12:02] 2025-10-12 12:12:02,133 [wrapper] pandaids: 6839163270
[2025-10-12 08:12:02] 2025-10-12 12:12:02,640 [wrapper] cleanup supervisor_pilot 2376018 1516486
[2025-10-12 08:12:02] 2025-10-12 12:12:02,643 [wrapper] Test setup, not cleaning
[2025-10-12 08:12:02] 2025-10-12 12:12:02,645 [wrapper] apfmon messages muted
[2025-10-12 08:12:02] 2025-10-12 12:12:02,648 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:12:02] 2025-10-12 12:12:02,651 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:12:02]  *** Error codes and diagnostics ***
[2025-10-12 08:12:02]     "exeErrorCode": 0,
[2025-10-12 08:12:02]     "exeErrorDiag": "",
[2025-10-12 08:12:02]     "pilotErrorCode": 0,
[2025-10-12 08:12:02]     "pilotErrorDiag": "",
[2025-10-12 08:12:02]  *** Listing of results directory ***
[2025-10-12 08:12:02] total 414020
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 20:13 queuedata.json
[2025-10-12 08:12:02] -rwx------. 1 boincer umatlas     36292 Oct 11 20:14 runpilot2-wrapper.sh
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:12:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 03:32 run_atlas
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 03:32 job.xml
[2025-10-12 08:12:02] -rw-r--r--. 2 boincer umatlas 219801294 Oct 12 03:32 EVNT.46676267._002750.pool.root.1
[2025-10-12 08:12:02] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 03:32 input.tar.gz
[2025-10-12 08:12:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 03:32 start_atlas.sh
[2025-10-12 08:12:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 03:32 shared
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 03:32 boinc_lockfile
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 03:32 pandaJob.out
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas    975520 Oct 12 03:32 agis_schedconf.cvmfs.json
[2025-10-12 08:12:02] drwx------. 5 boincer umatlas      4096 Oct 12 03:32 pilot3
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas      6947 Oct 12 08:09 init_data.xml
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas 194823646 Oct 12 08:10 HITS.46676269._067434.pool.root.1
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas       531 Oct 12 08:10 boinc_task_state.xml
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas      1038 Oct 12 08:11 memory_monitor_summary.json
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas    507631 Oct 12 08:11 log.46676269._067434.job.log.tgz.1
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas        95 Oct 12 08:11 pilot_heartbeat.json
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas      7777 Oct 12 08:11 heartbeat.json
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:11 boinc_mmap_file
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas        28 Oct 12 08:11 wrapper_checkpoint.txt
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas       823 Oct 12 08:12 pilotlog.txt
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas   2211273 Oct 12 08:12 log.46676269._067434.job.log.1
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas       357 Oct 12 08:12 output.list
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:12 runtime_log
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas   2734080 Oct 12 08:12 result.tar.gz
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas       654 Oct 12 08:12 yLcKDmauyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm11hNDmdEsqjm.diag
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 08:12 runtime_log.err
[2025-10-12 08:12:02] -rw-r--r--. 1 boincer umatlas     21193 Oct 12 08:12 stderr.txt
[2025-10-12 08:12:02] HITS file was successfully produced:
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas 194823646 Oct 12 08:10 shared/HITS.pool.root.1
[2025-10-12 08:12:02]  *** Contents of shared directory: ***
[2025-10-12 08:12:02] total 408164
[2025-10-12 08:12:02] -rw-r--r--. 2 boincer umatlas 219801294 Oct 12 03:32 ATLAS.root_0
[2025-10-12 08:12:02] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 03:32 input.tar.gz
[2025-10-12 08:12:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 03:32 start_atlas.sh
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas 194823646 Oct 12 08:10 HITS.pool.root.1
[2025-10-12 08:12:02] -rw-------. 1 boincer umatlas   2734080 Oct 12 08:12 result.tar.gz
08:12:03 (1512802): run_atlas exited; CPU time 39855.191925
08:12:03 (1512802): called boinc_finish(0)

</stderr_txt>
]]>

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