Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:30 (3049709): wrapper (7.7.26015): starting
15:59:30 (3049709): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 15:59:30] Arguments: --nthreads 3
[2025-10-12 15:59:30] Threads: 3
[2025-10-12 15:59:30] Checking for CVMFS
[2025-10-12 15:59:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:59:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:59:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:59:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:59:30] 2.9.2.0 1694695 4440 82100 151621 2 57 29936085 36864000 0 130560 0 3550315 99.991 150889 984 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 15:59:30] CVMFS is ok
[2025-10-12 15:59:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:59:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:59:30] Further information can be found at the LHC@home message board.
[2025-10-12 15:59:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:59:30] Checking for apptainer binary...
[2025-10-12 15:59:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:59:30] Running /usr/bin/apptainer --version
[2025-10-12 15:59:30] apptainer version 1.4.1-1.1
[2025-10-12 15:59:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:59:30] thA312a
[2025-10-12 15:59:30] apptainer works
[2025-10-12 15:59:30] Set ATHENA_PROC_NUMBER=3
[2025-10-12 15:59:30] Set ATHENA_CORE_NUMBER=3
[2025-10-12 15:59:30] Starting ATLAS job with PandaID=6839163846
[2025-10-12 15:59:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:17:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | did not find any defunct processes belonging to 3059868
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | ready for new job
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | ***************************************
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | ***************************************
[2025-10-12 17:17:46] 2025-10-12 15:17:19,194 | INFO     | 
[2025-10-12 17:17:46] 2025-10-12 15:17:19,195 | INFO     | architecture information:
[2025-10-12 17:17:46] 2025-10-12 15:17:19,195 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:17:46] 2025-10-12 15:17:19,204 | INFO     | cat /etc/os-release:
[2025-10-12 17:17:46] NAME="CentOS Linux"
[2025-10-12 17:17:46] VERSION="7 (Core)"
[2025-10-12 17:17:46] ID="centos"
[2025-10-12 17:17:46] ID_LIKE="rhel fedora"
[2025-10-12 17:17:46] VERSION_ID="7"
[2025-10-12 17:17:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:17:46] ANSI_COLOR="0;31"
[2025-10-12 17:17:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:17:46] HOME_URL="https://www.centos.org/"
[2025-10-12 17:17:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:17:46] 
[2025-10-12 17:17:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:17:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:17:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:17:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:17:46] 
[2025-10-12 17:17:46] 2025-10-12 15:17:19,204 | INFO     | ***************************************
[2025-10-12 17:17:46] 2025-10-12 15:17:19,707 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 17:17:46] 2025-10-12 15:17:19,720 | INFO     | sufficient remaining disk space (274625200128 B)
[2025-10-12 17:17:46] 2025-10-12 15:17:19,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | INFO     | update_server=False
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:17:46] 2025-10-12 15:17:19,721 | INFO     | aborting loop
[2025-10-12 17:17:46] 2025-10-12 15:17:20,133 | INFO     | all data control threads have been joined
[2025-10-12 17:17:46] 2025-10-12 15:17:20,726 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:20,727 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:20,727 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:20,980 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:20,999 | INFO     | all payload control threads have been joined
[2025-10-12 17:17:46] 2025-10-12 15:17:21,040 | INFO     | all job control threads have been joined
[2025-10-12 17:17:46] 2025-10-12 15:17:21,139 | INFO     | [data] control thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:21,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:17:46] 2025-10-12 15:17:21,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:17:46] 2025-10-12 15:17:21,356 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:21,631 | INFO     | [job] validate thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:21,706 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:21,736 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:21,811 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:22,005 | INFO     | [payload] control thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:22,046 | INFO     | [job] control thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:22,048 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:23,174 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:25,198 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:30,694 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:17:46] 2025-10-12 15:17:31,700 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:17:46] 2025-10-12 15:17:41,032 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:17:46] 2025-10-12 15:17:41,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297498236736)>', '<ExcThread(monitor, started 140297136740096)>']
[2025-10-12 17:17:46] 2025-10-12 15:17:41,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:17:46] 2025-10-12 15:17:41,837 | INFO     | [monitor] control thread has ended
[2025-10-12 17:17:46] 2025-10-12 15:17:46,674 | INFO     | all workflow threads have been joined
[2025-10-12 17:17:46] 2025-10-12 15:17:46,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:17:46] 2025-10-12 15:17:46,674 | INFO     | traces error code: 0
[2025-10-12 17:17:46] 2025-10-12 15:17:46,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:17:46] 2025-10-12 15:17:46,724 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:17:46] 2025-10-12 15:17:46,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:17:46] 2025-10-12 15:17:46,729 [wrapper] pilotpid: 3053430
[2025-10-12 17:17:46] 2025-10-12 15:17:46,731 [wrapper] Pilot exit status: 0
[2025-10-12 17:17:46] 2025-10-12 15:17:46,739 [wrapper] pandaids: 6839163846
[2025-10-12 17:17:46] 2025-10-12 15:17:46,756 [wrapper] cleanup supervisor_pilot 3071808 3053431
[2025-10-12 17:17:46] 2025-10-12 15:17:46,758 [wrapper] Test setup, not cleaning
[2025-10-12 17:17:46] 2025-10-12 15:17:46,761 [wrapper] apfmon messages muted
[2025-10-12 17:17:46] 2025-10-12 15:17:46,764 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:17:46] 2025-10-12 15:17:46,766 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:17:46]  *** Error codes and diagnostics ***
[2025-10-12 17:17:46]     "exeErrorCode": 0,
[2025-10-12 17:17:46]     "exeErrorDiag": "",
[2025-10-12 17:17:46]     "pilotErrorCode": 0,
[2025-10-12 17:17:46]     "pilotErrorDiag": "",
[2025-10-12 17:17:46]  *** Listing of results directory ***
[2025-10-12 17:17:46] total 402988
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:26 queuedata.json
[2025-10-12 17:17:46] -rwx------ 1 boinc boinc     36292 Oct 12 02:27 runpilot2-wrapper.sh
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:17:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:59 run_atlas
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:59 job.xml
[2025-10-12 17:17:46] -rw-r--r-- 2 boinc boinc 218943155 Oct 12 15:59 EVNT.46676267._002759.pool.root.1
[2025-10-12 17:17:46] -rw-r--r-- 2 boinc boinc    569682 Oct 12 15:59 input.tar.gz
[2025-10-12 17:17:46] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:59 start_atlas.sh
[2025-10-12 17:17:46] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:59 shared
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:59 boinc_setup_complete
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc      6447 Oct 12 15:59 init_data.xml
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:59 boinc_lockfile
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc      2548 Oct 12 15:59 pandaJob.out
[2025-10-12 17:17:46] -rw------- 1 boinc boinc    975528 Oct 12 15:59 agis_schedconf.cvmfs.json
[2025-10-12 17:17:46] -rw------- 1 boinc boinc   1560580 Oct 12 15:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:17:46] drwx------ 5 boinc boinc      4096 Oct 12 15:59 pilot3
[2025-10-12 17:17:46] -rw------- 1 boinc boinc 187974724 Oct 12 17:16 HITS.46676269._067550.pool.root.1
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc       529 Oct 12 17:16 boinc_task_state.xml
[2025-10-12 17:17:46] -rw------- 1 boinc boinc        95 Oct 12 17:16 pilot_heartbeat.json
[2025-10-12 17:17:46] -rw------- 1 boinc boinc      1017 Oct 12 17:17 memory_monitor_summary.json
[2025-10-12 17:17:46] -rw------- 1 boinc boinc    236407 Oct 12 17:17 log.46676269._067550.job.log.tgz.1
[2025-10-12 17:17:46] -rw------- 1 boinc boinc      7746 Oct 12 17:17 heartbeat.json
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc        27 Oct 12 17:17 wrapper_checkpoint.txt
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc      8192 Oct 12 17:17 boinc_mmap_file
[2025-10-12 17:17:46] -rw------- 1 boinc boinc      4628 Oct 12 17:17 pilotlog.txt
[2025-10-12 17:17:46] -rw------- 1 boinc boinc    688546 Oct 12 17:17 log.46676269._067550.job.log.1
[2025-10-12 17:17:46] -rw------- 1 boinc boinc       357 Oct 12 17:17 output.list
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc       620 Oct 12 17:17 runtime_log
[2025-10-12 17:17:46] -rw------- 1 boinc boinc    942080 Oct 12 17:17 result.tar.gz
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc      8782 Oct 12 17:17 runtime_log.err
[2025-10-12 17:17:46] -rw------- 1 boinc boinc       659 Oct 12 17:17 XVdLDm66yR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBrSMDm69f2Hm.diag
[2025-10-12 17:17:46] -rw-r--r-- 1 boinc boinc      9657 Oct 12 17:17 stderr.txt
[2025-10-12 17:17:46] HITS file was successfully produced:
[2025-10-12 17:17:46] -rw------- 1 boinc boinc 187974724 Oct 12 17:16 shared/HITS.pool.root.1
[2025-10-12 17:17:46]  *** Contents of shared directory: ***
[2025-10-12 17:17:46] total 398888
[2025-10-12 17:17:46] -rw-r--r-- 2 boinc boinc 218943155 Oct 12 15:59 ATLAS.root_0
[2025-10-12 17:17:46] -rw-r--r-- 2 boinc boinc    569682 Oct 12 15:59 input.tar.gz
[2025-10-12 17:17:46] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:59 start_atlas.sh
[2025-10-12 17:17:46] -rw------- 1 boinc boinc 187974724 Oct 12 17:16 HITS.pool.root.1
[2025-10-12 17:17:46] -rw------- 1 boinc boinc    942080 Oct 12 17:17 result.tar.gz
17:17:48 (3049709): run_atlas exited; CPU time 13262.636889
17:17:48 (3049709): called boinc_finish(0)

</stderr_txt>
]]>

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