Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:07:14 (635978): wrapper (7.7.26015): starting
02:07:14 (635978): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 02:07:14] Arguments: --nthreads 9
[2025-10-12 02:07:14] Threads: 9
[2025-10-12 02:07:14] Checking for CVMFS
[2025-10-12 02:07:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:07:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:07:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:07:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:07:15] 2.13.2.0 3269412 35346 369172 151610 3 13 30833305 40960000 49877 16776704 0 451448032 99.844 184214480 36801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 02:07:15] CVMFS is ok
[2025-10-12 02:07:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:07:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:07:15] Further information can be found at the LHC@home message board.
[2025-10-12 02:07:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:07:15] Checking for apptainer binary...
[2025-10-12 02:07:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:07:15] Running /usr/bin/apptainer --version
[2025-10-12 02:07:15] apptainer version 1.4.3-1.el9
[2025-10-12 02:07:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:07:15] c8-16-2.aglt2.org
[2025-10-12 02:07:15] apptainer works
[2025-10-12 02:07:15] Set ATHENA_PROC_NUMBER=9
[2025-10-12 02:07:15] Set ATHENA_CORE_NUMBER=9
[2025-10-12 02:07:15] Starting ATLAS job with PandaID=6838851879
[2025-10-12 02:07:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:00:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:00:45]  replicas=None
[2025-10-12 03:00:45]  scope=mc23_13p6TeV
[2025-10-12 03:00:45]  status=None
[2025-10-12 03:00:45]  status_code=0
[2025-10-12 03:00:45]  storage_token=
[2025-10-12 03:00:45]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6838851879/log.46676269._063974.job.log.tgz.1
[2025-10-12 03:00:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/34/log.46676269._063974.job.log.tgz.1
[2025-10-12 03:00:45]  workdir=None
[2025-10-12 03:00:45] ]
[2025-10-12 03:00:45] 2025-10-12 07:00:03,937 | INFO     | transferring file log.46676269._063974.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6838851879/log.46676269._063974.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 03:00:45] 2025-10-12 07:00:03,937 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6838851879/log.46676269._063974.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._063974.job
[2025-10-12 03:00:45] 2025-10-12 07:00:03,971 | INFO     | adding to output.list: log.46676269._063974.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/34/log.46676269._063974.job.log.tg
[2025-10-12 03:00:45] 2025-10-12 07:00:03,971 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 03:00:45] 2025-10-12 07:00:03,971 | INFO     | summary of transferred files:
[2025-10-12 03:00:45] 2025-10-12 07:00:03,971 | INFO     |  -- lfn=log.46676269._063974.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 03:00:45] 2025-10-12 07:00:03,971 | INFO     | stage-out finished correctly
[2025-10-12 03:00:45] 2025-10-12 07:00:05,381 | INFO     | time since job start (3156s) is within the limit (172800.0s)
[2025-10-12 03:00:45] 2025-10-12 07:00:05,505 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 03:00:45] 2025-10-12 07:00:06,201 | INFO     | job 6838851879 has state=finished
[2025-10-12 03:00:45] 2025-10-12 07:00:06,201 | INFO     | preparing for final server update for job 6838851879 in state='finished'
[2025-10-12 03:00:45] 2025-10-12 07:00:06,201 | INFO     | this job has now completed (state=finished)
[2025-10-12 03:00:45] 2025-10-12 07:00:06,201 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 03:00:45] 2025-10-12 07:00:06,202 | INFO     | log transfer has been attempted: DONE
[2025-10-12 03:00:45] 2025-10-12 07:00:06,202 | INFO     | job 6838851879 has finished - writing final server update
[2025-10-12 03:00:45] 2025-10-12 07:00:06,202 | INFO     | total number of processed events: 400 (read)
[2025-10-12 03:00:45] 2025-10-12 07:00:06,202 | INFO     | executing command: lscpu
[2025-10-12 03:00:45] 2025-10-12 07:00:06,283 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 03:00:45] 2025-10-12 07:00:07,389 | INFO     | time since job start (3158s) is within the limit (172800.0s)
[2025-10-12 03:00:45] 2025-10-12 07:00:08,680 | WARNING  | process 652447 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 03:00:45] 2025-10-12 07:00:08,680 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838851879/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:00:45] 2025-10-12 07:00:09,398 | INFO     | time since job start (3160s) is within the limit (172800.0s)
[2025-10-12 03:00:45] 2025-10-12 07:00:09,706 | INFO     | number of running child processes to parent process 652447: 1
[2025-10-12 03:00:45] 2025-10-12 07:00:09,706 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:00:45] 2025-10-12 07:00:11,405 | INFO     | time since job start (3162s) is within the limit (172800.0s)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,052 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 03:00:45] 2025-10-12 07:00:12,056 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3774.205281249998
[2025-10-12 03:00:45] 2025-10-12 07:00:12,065 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838851879/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,066 | INFO     | extracted standard info from prmon json
[2025-10-12 03:00:45] 2025-10-12 07:00:12,066 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:00:45] 2025-10-12 07:00:12,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:00:45] 2025-10-12 07:00:12,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:00:45] 2025-10-12 07:00:12,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | sum of square deviations: 28242390.0
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | sum of deviations: -73284546.00000007
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | mean x: 1760250929.0
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | mean y: 2214821.222222222
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | -- intersect: 4569788251.723088
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | intersect: 4569788251.723088
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | chi2: 0.015192673175216682
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | -- intersect: 4569788251.723088
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | current memory leak: -2.59 B/s (using 45 data points, chi2=0.02)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,067 | INFO     | could have reported an average CPU frequency of 3792 MHz (5 samples)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | ..............................
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . Timing measurements:
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . get job = 0 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . initial setup = 2 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . payload setup = 8 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . stage-in = 0 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . payload execution = 3124 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . stage-out = 0 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | . log creation = 0 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,068 | INFO     | ..............................
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | 
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | job summary report
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | --------------------------------------------------
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | PanDA job id: 6838851879
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | task id: 46676269
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | errors: (none)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | pilot state: finished 
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | transexitcode: 0
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | exeerrorcode: 0
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | exeerrordiag: 
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | exitcode: 0
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | exitmsg: OK
[2025-10-12 03:00:45] 2025-10-12 07:00:12,121 | INFO     | cpuconsumptiontime: 21473 s
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | nevents: 400
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | neventsw: 0
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | pid: 652447
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | pgrp: 652447
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | corecount: 9
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | event service: False
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | sizes: {0: 2348579, 1: 2348834, 7: 2349096, 11: 2349124, 3137: 2374561, 3138: 2383559, 3140: 2383743, 3146: 2383969}
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | --------------------------------------------------
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | 
[2025-10-12 03:00:45] 2025-10-12 07:00:12,122 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 03:00:45] 2025-10-12 07:00:12,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:00:45] 2025-10-12 07:00:12,145 | INFO     | job 6838851879 has completed (purged errors)
[2025-10-12 03:00:45] 2025-10-12 07:00:12,146 | INFO     | overall cleanup function is called
[2025-10-12 03:00:45] 2025-10-12 07:00:13,157 | INFO     | --- collectZombieJob: --- 10, [652447]
[2025-10-12 03:00:45] 2025-10-12 07:00:13,157 | INFO     | zombie collector waiting for pid 652447
[2025-10-12 03:00:45] 2025-10-12 07:00:13,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:00:45] 2025-10-12 07:00:13,157 | INFO     | collected zombie processes
[2025-10-12 03:00:45] 2025-10-12 07:00:13,157 | INFO     | will attempt to kill all subprocesses of pid=652447
[2025-10-12 03:00:45] 2025-10-12 07:00:13,760 | INFO     | process IDs to be killed: [652447] (in reverse order)
[2025-10-12 03:00:45] 2025-10-12 07:00:13,978 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:00:45] 2025-10-12 07:00:13,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:00:45] 2025-10-12 07:00:14,008 | INFO     | did not find any defunct processes belonging to 652447
[2025-10-12 03:00:45] 2025-10-12 07:00:14,038 | INFO     | did not find any defunct processes belonging to 652447
[2025-10-12 03:00:45] 2025-10-12 07:00:14,038 | INFO     | ready for new job
[2025-10-12 03:00:45] 2025-10-12 07:00:14,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:00:45] 2025-10-12 07:00:14,040 | INFO     | ***************************************
[2025-10-12 03:00:45] 2025-10-12 07:00:14,040 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:00:45] 2025-10-12 07:00:14,040 | INFO     | ***************************************
[2025-10-12 03:00:45] 2025-10-12 07:00:14,040 | INFO     | 
[2025-10-12 03:00:45] 2025-10-12 07:00:14,045 | INFO     | architecture information:
[2025-10-12 03:00:45] 2025-10-12 07:00:14,046 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:00:45] 2025-10-12 07:00:14,061 | INFO     | cat /etc/os-release:
[2025-10-12 03:00:45] NAME="CentOS Linux"
[2025-10-12 03:00:45] VERSION="7 (Core)"
[2025-10-12 03:00:45] ID="centos"
[2025-10-12 03:00:45] ID_LIKE="rhel fedora"
[2025-10-12 03:00:45] VERSION_ID="7"
[2025-10-12 03:00:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:00:45] ANSI_COLOR="0;31"
[2025-10-12 03:00:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:00:45] HOME_URL="https://www.centos.org/"
[2025-10-12 03:00:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:00:45] 
[2025-10-12 03:00:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:00:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:00:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:00:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:00:45] 
[2025-10-12 03:00:45] 2025-10-12 07:00:14,062 | INFO     | ***************************************
[2025-10-12 03:00:45] 2025-10-12 07:00:14,564 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 03:00:45] 2025-10-12 07:00:14,581 | INFO     | sufficient remaining disk space (167445004288 B)
[2025-10-12 03:00:45] 2025-10-12 07:00:14,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:00:45] 2025-10-12 07:00:14,581 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:00:45] 2025-10-12 07:00:14,581 | INFO     | update_server=False
[2025-10-12 03:00:45] 2025-10-12 07:00:14,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:00:45] 2025-10-12 07:00:14,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:00:45] 2025-10-12 07:00:14,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 03:00:45] 2025-10-12 07:00:14,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 03:00:45] 2025-10-12 07:00:14,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:00:45] 2025-10-12 07:00:14,720 | INFO     | will abort loop
[2025-10-12 03:00:45] 2025-10-12 07:00:14,773 | INFO     | all data control threads have been joined
[2025-10-12 03:00:45] 2025-10-12 07:00:15,116 | INFO     | all payload control threads have been joined
[2025-10-12 03:00:45] 2025-10-12 07:00:15,586 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:15,724 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:15,778 | INFO     | [data] control thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:15,886 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,064 | INFO     | [job] validate thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:00:45] 2025-10-12 07:00:16,109 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,121 | INFO     | [payload] control thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,228 | INFO     | all job control threads have been joined
[2025-10-12 03:00:45] 2025-10-12 07:00:16,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,551 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,624 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:16,823 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:17,026 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:17,056 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:17,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:00:45] 2025-10-12 07:00:17,233 | INFO     | [job] control thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:18,144 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:20,088 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:00:45] 2025-10-12 07:00:34,246 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:00:45] 2025-10-12 07:00:34,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158640785216)>', '<ExcThread(monitor, started 140157936203520)>']
[2025-10-12 03:00:45] 2025-10-12 07:00:39,318 | INFO     | all workflow threads have been joined
[2025-10-12 03:00:45] 2025-10-12 07:00:39,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:00:45] 2025-10-12 07:00:39,318 | INFO     | traces error code: 0
[2025-10-12 03:00:45] 2025-10-12 07:00:39,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:00:45] 2025-10-12 07:00:45,247 | INFO     | PID=640721 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 03:00:45] 2025-10-12 07:00:45,248 | INFO     | .. there are 52 such processes running
[2025-10-12 03:00:45] 2025-10-12 07:00:45,250 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:00:45] 2025-10-12 07:00:45,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:00:45] 2025-10-12 07:00:45,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:00:45] 2025-10-12 07:00:45,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:00:45] 2025-10-12 07:00:45,250 | INFO     | [monitor] control thread has ended
[2025-10-12 03:00:45] 2025-10-12 07:00:45,485 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:00:45] 2025-10-12 07:00:45,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:00:45] 2025-10-12 07:00:45,506 [wrapper] pilotpid: 640721
[2025-10-12 03:00:45] 2025-10-12 07:00:45,512 [wrapper] Pilot exit status: 0
[2025-10-12 03:00:45] 2025-10-12 07:00:45,541 [wrapper] pandaids: 6838851879
[2025-10-12 03:00:45] 2025-10-12 07:00:45,695 [wrapper] cleanup supervisor_pilot 1088698 640722
[2025-10-12 03:00:45] 2025-10-12 07:00:45,698 [wrapper] Test setup, not cleaning
[2025-10-12 03:00:45] 2025-10-12 07:00:45,703 [wrapper] apfmon messages muted
[2025-10-12 03:00:45] 2025-10-12 07:00:45,706 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:00:45] 2025-10-12 07:00:45,709 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:00:45]  *** Error codes and diagnostics ***
[2025-10-12 03:00:45]     "exeErrorCode": 0,
[2025-10-12 03:00:45]     "exeErrorDiag": "",
[2025-10-12 03:00:45]     "pilotErrorCode": 0,
[2025-10-12 03:00:45]     "pilotErrorDiag": "",
[2025-10-12 03:00:45]  *** Listing of results directory ***
[2025-10-12 03:00:45] total 407020
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:53 queuedata.json
[2025-10-12 03:00:45] -rwx------. 1 boincer umatlas     36292 Oct 11 15:53 runpilot2-wrapper.sh
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas       100 Oct 12 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:00:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 02:07 run_atlas
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas       105 Oct 12 02:07 job.xml
[2025-10-12 03:00:45] -rw-r--r--. 2 boincer umatlas 219002807 Oct 12 02:07 EVNT.46676267._002571.pool.root.1
[2025-10-12 03:00:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 02:07 start_atlas.sh
[2025-10-12 03:00:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 02:07 shared
[2025-10-12 03:00:45] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 02:07 input.tar.gz
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas         0 Oct 12 02:07 boinc_lockfile
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 02:07 pandaJob.out
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas    975528 Oct 12 02:07 agis_schedconf.cvmfs.json
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas   1560580 Oct 12 02:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:00:45] drwx------. 5 boincer umatlas      4096 Oct 12 02:07 pilot3
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas      7161 Oct 12 02:56 init_data.xml
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas 192328456 Oct 12 02:59 HITS.46676269._063974.pool.root.1
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas       529 Oct 12 02:59 boinc_task_state.xml
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas      1035 Oct 12 02:59 memory_monitor_summary.json
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas    323629 Oct 12 03:00 log.46676269._063974.job.log.tgz.1
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas      7769 Oct 12 03:00 heartbeat.json
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 03:00 boinc_mmap_file
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas        27 Oct 12 03:00 wrapper_checkpoint.txt
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas        95 Oct 12 03:00 pilot_heartbeat.json
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas       822 Oct 12 03:00 pilotlog.txt
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas    453720 Oct 12 03:00 log.46676269._063974.job.log.1
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas       357 Oct 12 03:00 output.list
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas       620 Oct 12 03:00 runtime_log
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas    798720 Oct 12 03:00 result.tar.gz
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 03:00 runtime_log.err
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas       651 Oct 12 03:00 HB5NDmjpuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtThNDmvOGiDm.diag
[2025-10-12 03:00:45] -rw-r--r--. 1 boincer umatlas     21831 Oct 12 03:00 stderr.txt
[2025-10-12 03:00:45] HITS file was successfully produced:
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas 192328456 Oct 12 02:59 shared/HITS.pool.root.1
[2025-10-12 03:00:45]  *** Contents of shared directory: ***
[2025-10-12 03:00:45] total 403056
[2025-10-12 03:00:45] -rw-r--r--. 2 boincer umatlas 219002807 Oct 12 02:07 ATLAS.root_0
[2025-10-12 03:00:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 02:07 start_atlas.sh
[2025-10-12 03:00:45] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 02:07 input.tar.gz
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas 192328456 Oct 12 02:59 HITS.pool.root.1
[2025-10-12 03:00:45] -rw-------. 1 boincer umatlas    798720 Oct 12 03:00 result.tar.gz
03:00:47 (635978): run_atlas exited; CPU time 21590.308255
03:00:47 (635978): called boinc_finish(0)

</stderr_txt>
]]>

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