Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:27 (1505641): wrapper (7.7.26015): starting
16:53:27 (1505641): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 16:53:27] Arguments: --nthreads 2
[2025-10-12 16:53:27] Threads: 2
[2025-10-12 16:53:27] Checking for CVMFS
[2025-10-12 16:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:53:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:53:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:53:27] 2.9.2.0 379978 4505 59336 151623 0 56 28176902 36864001 0 130560 0 2729851 99.989 151586 657 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 16:53:27] CVMFS is ok
[2025-10-12 16:53:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:53:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:53:27] Further information can be found at the LHC@home message board.
[2025-10-12 16:53:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:53:27] Checking for apptainer binary...
[2025-10-12 16:53:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:53:27] Running /usr/bin/apptainer --version
[2025-10-12 16:53:27] apptainer version 1.4.1-1.1
[2025-10-12 16:53:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:53:27] belleA253d
[2025-10-12 16:53:27] apptainer works
[2025-10-12 16:53:27] Set ATHENA_PROC_NUMBER=2
[2025-10-12 16:53:27] Set ATHENA_CORE_NUMBER=2
[2025-10-12 16:53:27] Starting ATLAS job with PandaID=6839319360
[2025-10-12 16:53:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:02:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:02:58] 2025-10-12 17:02:08,670 | INFO     | intersect: -18998944095.656948
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | chi2: 1.491242567208315
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | current chi2=1.491242567208315 (change=-0.16126881203004978 %)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | right removable region: 120
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | sum of deviations: -8450960984.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | mean x: 1760284814.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | mean y: 2340985.7685950412
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | -- intersect: 27084555141.025005
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | intersect: 27084555141.025005
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | chi2: 0.10226000121842223
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | current chi2=0.10226000121842223 (change=93.13157249130073 %)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,671 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | sum of deviations: -4386373939.499999
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | mean x: 1760284966.5
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | mean y: 2331480.525862069
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | -- intersect: 15956292157.866535
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | intersect: 15956292157.866535
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | chi2: 0.0750044142987223
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | current chi2=0.0750044142987223 (change=26.653223738461882 %)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | sum of deviations: 33003013.000000034
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | mean x: 1760285119.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | mean y: 2320223.585585586
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | -- intersect: -134681016.24949142
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | intersect: -134681016.24949142
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | chi2: 0.02421070869537002
[2025-10-12 19:02:58] 2025-10-12 17:02:08,672 | INFO     | current chi2=0.02421070869537002 (change=67.72095493080539 %)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | sum of deviations: 295452554.50000006
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | mean x: 1760285271.5
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | mean y: 2319591.462264151
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | -- intersect: -1406039619.4106793
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | intersect: -1406039619.4106793
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | chi2: 0.009009394857699865
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | current chi2=0.009009394857699865 (change=62.78756243338389 %)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | sum of deviations: -433729886.00000024
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | mean x: 1760285424.0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | mean y: 2321809.504950495
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | -- intersect: 2392346961.5884037
[2025-10-12 19:02:58] 2025-10-12 17:02:08,673 | INFO     | intersect: 2392346961.5884037
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | chi2: 0.006795715911426992
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | current chi2=0.006795715911426992 (change=24.570783956493543 %)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | left removable region: 50
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | sum of deviations: -861115070.4999999
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | mean x: 1760286003.5
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | mean y: 2325461.6714285715
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | -- intersect: 14257105568.451088
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | intersect: 14257105568.451088
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | chi2: 0.004518353426693959
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | -- intersect: 14257105568.451088
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | current memory leak: -8.10 B/s (using 70 data points, chi2=0.00)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | could have reported an average CPU frequency of 4405 MHz (8 samples)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | ..............................
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | . Timing measurements:
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | . get job = 0 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | . initial setup = 1 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | . payload setup = 7 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,674 | INFO     | . stage-in = 0 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,675 | INFO     | . payload execution = 7666 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,675 | INFO     | . stage-out = 0 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,675 | INFO     | . log creation = 0 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,675 | INFO     | ..............................
[2025-10-12 19:02:58] 2025-10-12 17:02:08,950 | INFO     | 
[2025-10-12 19:02:58] 2025-10-12 17:02:08,950 | INFO     | job summary report
[2025-10-12 19:02:58] 2025-10-12 17:02:08,950 | INFO     | --------------------------------------------------
[2025-10-12 19:02:58] 2025-10-12 17:02:08,950 | INFO     | PanDA job id: 6839319360
[2025-10-12 19:02:58] 2025-10-12 17:02:08,950 | INFO     | task id: 46676269
[2025-10-12 19:02:58] 2025-10-12 17:02:08,950 | INFO     | errors: (none)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | pilot state: finished 
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | transexitcode: 0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | exeerrorcode: 0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | exeerrordiag: 
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | exitcode: 0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,951 | INFO     | exitmsg: OK
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | cpuconsumptiontime: 14973 s
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | nevents: 400
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | neventsw: 0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | pid: 1515753
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | pgrp: 1515753
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | corecount: 2
[2025-10-12 19:02:58] 2025-10-12 17:02:08,952 | INFO     | event service: False
[2025-10-12 19:02:58] 2025-10-12 17:02:08,953 | INFO     | sizes: {0: 2348859, 6: 2349121, 10: 2349149, 7677: 2385895, 7680: 2385895, 7690: 2386089}
[2025-10-12 19:02:58] 2025-10-12 17:02:08,953 | INFO     | --------------------------------------------------
[2025-10-12 19:02:58] 2025-10-12 17:02:08,953 | INFO     | 
[2025-10-12 19:02:58] 2025-10-12 17:02:08,953 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | job 6839319360 has completed (purged errors)
[2025-10-12 19:02:58] 2025-10-12 17:02:08,965 | INFO     | overall cleanup function is called
[2025-10-12 19:02:58] 2025-10-12 17:02:09,971 | INFO     | --- collectZombieJob: --- 10, [1515753]
[2025-10-12 19:02:58] 2025-10-12 17:02:09,972 | INFO     | zombie collector waiting for pid 1515753
[2025-10-12 19:02:58] 2025-10-12 17:02:09,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:02:58] 2025-10-12 17:02:09,972 | INFO     | collected zombie processes
[2025-10-12 19:02:58] 2025-10-12 17:02:09,972 | INFO     | will attempt to kill all subprocesses of pid=1515753
[2025-10-12 19:02:58] 2025-10-12 17:02:10,005 | INFO     | process IDs to be killed: [1515753] (in reverse order)
[2025-10-12 19:02:58] 2025-10-12 17:02:10,026 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:02:58] 2025-10-12 17:02:10,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:02:58] 2025-10-12 17:02:10,030 | INFO     | did not find any defunct processes belonging to 1515753
[2025-10-12 19:02:58] 2025-10-12 17:02:10,033 | INFO     | did not find any defunct processes belonging to 1515753
[2025-10-12 19:02:58] 2025-10-12 17:02:10,033 | INFO     | ready for new job
[2025-10-12 19:02:58] 2025-10-12 17:02:10,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:02:58] 2025-10-12 17:02:10,036 | INFO     | ***************************************
[2025-10-12 19:02:58] 2025-10-12 17:02:10,036 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:02:58] 2025-10-12 17:02:10,036 | INFO     | ***************************************
[2025-10-12 19:02:58] 2025-10-12 17:02:10,036 | INFO     | 
[2025-10-12 19:02:58] 2025-10-12 17:02:10,037 | INFO     | architecture information:
[2025-10-12 19:02:58] 2025-10-12 17:02:10,038 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:02:58] 2025-10-12 17:02:10,064 | INFO     | cat /etc/os-release:
[2025-10-12 19:02:58] NAME="CentOS Linux"
[2025-10-12 19:02:58] VERSION="7 (Core)"
[2025-10-12 19:02:58] ID="centos"
[2025-10-12 19:02:58] ID_LIKE="rhel fedora"
[2025-10-12 19:02:58] VERSION_ID="7"
[2025-10-12 19:02:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:02:58] ANSI_COLOR="0;31"
[2025-10-12 19:02:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:02:58] HOME_URL="https://www.centos.org/"
[2025-10-12 19:02:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:02:58] 
[2025-10-12 19:02:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:02:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:02:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:02:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:02:58] 
[2025-10-12 19:02:58] 2025-10-12 17:02:10,064 | INFO     | ***************************************
[2025-10-12 19:02:58] 2025-10-12 17:02:10,568 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 19:02:58] 2025-10-12 17:02:10,580 | INFO     | sufficient remaining disk space (495848521728 B)
[2025-10-12 19:02:58] 2025-10-12 17:02:10,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:02:58] 2025-10-12 17:02:10,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:02:58] 2025-10-12 17:02:10,580 | INFO     | update_server=False
[2025-10-12 19:02:58] 2025-10-12 17:02:10,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:02:58] 2025-10-12 17:02:10,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:02:58] 2025-10-12 17:02:10,870 | INFO     | all payload control threads have been joined
[2025-10-12 19:02:58] 2025-10-12 17:02:11,005 | INFO     | all data control threads have been joined
[2025-10-12 19:02:58] 2025-10-12 17:02:11,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:02:58] 2025-10-12 17:02:11,200 | INFO     | aborting loop
[2025-10-12 19:02:58] 2025-10-12 17:02:11,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:02:58] 2025-10-12 17:02:11,474 | INFO     | all job control threads have been joined
[2025-10-12 19:02:58] 2025-10-12 17:02:11,584 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:11,586 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:11,592 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:11,623 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:11,647 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:11,780 | INFO     | [job] validate thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:11,876 | INFO     | [payload] control thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:12,011 | INFO     | [data] control thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:12,206 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:12,479 | INFO     | [job] control thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:12,627 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:12,753 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:12,998 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:13,409 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:13,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:02:58] 2025-10-12 17:02:17,878 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:21,538 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:02:58] 2025-10-12 17:02:22,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:02:58] 2025-10-12 17:02:40,906 | INFO     | PID=1509345 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:02:58] 2025-10-12 17:02:40,906 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:02:58] 2025-10-12 17:02:40,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:02:58] 2025-10-12 17:02:40,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:02:58] 2025-10-12 17:02:51,610 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:02:58] 2025-10-12 17:02:53,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671553185600)>', '<ExcThread(monitor, started 140670849251072)>']
[2025-10-12 19:02:58] 2025-10-12 17:02:53,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:02:58] 2025-10-12 17:02:53,971 | INFO     | [monitor] control thread has ended
[2025-10-12 19:02:58] 2025-10-12 17:02:58,414 | INFO     | all workflow threads have been joined
[2025-10-12 19:02:58] 2025-10-12 17:02:58,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:02:58] 2025-10-12 17:02:58,414 | INFO     | traces error code: 0
[2025-10-12 19:02:58] 2025-10-12 17:02:58,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:02:58] 2025-10-12 17:02:58,454 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:02:58] 2025-10-12 17:02:58,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:02:58] 2025-10-12 17:02:58,459 [wrapper] pilotpid: 1509345
[2025-10-12 19:02:58] 2025-10-12 17:02:58,461 [wrapper] Pilot exit status: 0
[2025-10-12 19:02:58] 2025-10-12 17:02:58,467 [wrapper] pandaids: 6839319360
[2025-10-12 19:02:58] 2025-10-12 17:02:58,479 [wrapper] cleanup supervisor_pilot 1529788 1509346
[2025-10-12 19:02:58] 2025-10-12 17:02:58,481 [wrapper] Test setup, not cleaning
[2025-10-12 19:02:58] 2025-10-12 17:02:58,483 [wrapper] apfmon messages muted
[2025-10-12 19:02:58] 2025-10-12 17:02:58,485 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:02:58] 2025-10-12 17:02:58,487 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:02:58]  *** Error codes and diagnostics ***
[2025-10-12 19:02:58]     "exeErrorCode": 0,
[2025-10-12 19:02:58]     "exeErrorDiag": "",
[2025-10-12 19:02:58]     "pilotErrorCode": 0,
[2025-10-12 19:02:58]     "pilotErrorDiag": "",
[2025-10-12 19:02:58]  *** Listing of results directory ***
[2025-10-12 19:02:58] total 418760
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:56 pilot3.tar.gz
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:17 queuedata.json
[2025-10-12 19:02:58] -rwx------ 1 boinc boinc     36292 Oct 12 05:17 runpilot2-wrapper.sh
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc       100 Oct 12 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:02:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 16:53 run_atlas
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc       105 Oct 12 16:53 job.xml
[2025-10-12 19:02:58] -rw-r--r-- 2 boinc boinc 220528641 Oct 12 16:53 EVNT.46676267._003217.pool.root.1
[2025-10-12 19:02:58] -rw-r--r-- 2 boinc boinc    569682 Oct 12 16:53 input.tar.gz
[2025-10-12 19:02:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:53 start_atlas.sh
[2025-10-12 19:02:58] drwxrwx--x 2 boinc boinc      4096 Oct 12 16:53 shared
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:53 boinc_setup_complete
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc      6207 Oct 12 16:53 init_data.xml
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:53 boinc_lockfile
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc      2549 Oct 12 16:53 pandaJob.out
[2025-10-12 19:02:58] -rw------- 1 boinc boinc    975528 Oct 12 16:53 agis_schedconf.cvmfs.json
[2025-10-12 19:02:58] -rw------- 1 boinc boinc   1560580 Oct 12 16:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:02:58] drwx------ 5 boinc boinc      4096 Oct 12 16:53 pilot3
[2025-10-12 19:02:58] -rw------- 1 boinc boinc 201607804 Oct 12 19:01 HITS.46676269._070062.pool.root.1
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:01 boinc_task_state.xml
[2025-10-12 19:02:58] -rw------- 1 boinc boinc      1016 Oct 12 19:01 memory_monitor_summary.json
[2025-10-12 19:02:58] -rw------- 1 boinc boinc    269742 Oct 12 19:01 log.46676269._070062.job.log.tgz.1
[2025-10-12 19:02:58] -rw------- 1 boinc boinc      7761 Oct 12 19:02 heartbeat.json
[2025-10-12 19:02:58] -rw------- 1 boinc boinc        95 Oct 12 19:02 pilot_heartbeat.json
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:02 wrapper_checkpoint.txt
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:02 boinc_mmap_file
[2025-10-12 19:02:58] -rw------- 1 boinc boinc      4824 Oct 12 19:02 pilotlog.txt
[2025-10-12 19:02:58] -rw------- 1 boinc boinc   1112087 Oct 12 19:02 log.46676269._070062.job.log.1
[2025-10-12 19:02:58] -rw------- 1 boinc boinc       357 Oct 12 19:02 output.list
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:02 runtime_log
[2025-10-12 19:02:58] -rw------- 1 boinc boinc   1402880 Oct 12 19:02 result.tar.gz
[2025-10-12 19:02:58] -rw------- 1 boinc boinc       663 Oct 12 19:02 zBkLDmRl1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmd5SMDm3psx1m.diag
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc      8797 Oct 12 19:02 runtime_log.err
[2025-10-12 19:02:58] -rw-r--r-- 1 boinc boinc     20897 Oct 12 19:02 stderr.txt
[2025-10-12 19:02:58] HITS file was successfully produced:
[2025-10-12 19:02:58] -rw------- 1 boinc boinc 201607804 Oct 12 19:01 shared/HITS.pool.root.1
[2025-10-12 19:02:58]  *** Contents of shared directory: ***
[2025-10-12 19:02:58] total 414204
[2025-10-12 19:02:58] -rw-r--r-- 2 boinc boinc 220528641 Oct 12 16:53 ATLAS.root_0
[2025-10-12 19:02:58] -rw-r--r-- 2 boinc boinc    569682 Oct 12 16:53 input.tar.gz
[2025-10-12 19:02:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:53 start_atlas.sh
[2025-10-12 19:02:58] -rw------- 1 boinc boinc 201607804 Oct 12 19:01 HITS.pool.root.1
[2025-10-12 19:02:58] -rw------- 1 boinc boinc   1402880 Oct 12 19:02 result.tar.gz
19:02:59 (1505641): run_atlas exited; CPU time 15006.711931
19:02:59 (1505641): called boinc_finish(0)

</stderr_txt>
]]>

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