Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:04 (2669788): wrapper (7.7.26015): starting
17:03:04 (2669788): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 17:03:04] Arguments: --nthreads 2
[2025-10-12 17:03:04] Threads: 2
[2025-10-12 17:03:04] Checking for CVMFS
[2025-10-12 17:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:03:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:03:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:03:04] 2.9.2.0 1447080 4384 58428 151623 2 57 26914441 36864001 0 130560 0 2653893 99.988 148983 899 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 17:03:04] CVMFS is ok
[2025-10-12 17:03:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:03:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:03:04] Further information can be found at the LHC@home message board.
[2025-10-12 17:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:03:04] Checking for apptainer binary...
[2025-10-12 17:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:03:04] Running /usr/bin/apptainer --version
[2025-10-12 17:03:04] apptainer version 1.4.1-1.1
[2025-10-12 17:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:03:04] legendA165
[2025-10-12 17:03:04] apptainer works
[2025-10-12 17:03:04] Set ATHENA_PROC_NUMBER=2
[2025-10-12 17:03:04] Set ATHENA_CORE_NUMBER=2
[2025-10-12 17:03:05] Starting ATLAS job with PandaID=6839163313
[2025-10-12 17:03:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:13:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:13:34] 2025-10-12 17:12:31,728 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:13:34] 2025-10-12 17:12:31,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:13:34] 2025-10-12 17:12:31,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:13:34] 2025-10-12 17:12:31,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | sum of deviations: 14210045343.000002
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | mean x: 1760285266.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | mean y: 2275501.472440945
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | -- intersect: -39381364943.88532
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | intersect: -39381364943.88532
[2025-10-12 19:13:34] 2025-10-12 17:12:31,729 | INFO     | chi2: 1.4042756641611591
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | sum of deviations: 13698014880.999998
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | mean x: 1760285113.5
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | mean y: 2274418.819672131
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | -- intersect: -42824159551.07157
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | intersect: -42824159551.07157
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | chi2: 1.4062336088124316
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | current chi2=1.4062336088124316 (change=-0.13942737179327955 %)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | right removable region: 121
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | sum of deviations: 817787929.4999994
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | mean x: 1760285418.5
[2025-10-12 19:13:34] 2025-10-12 17:12:31,730 | INFO     | mean y: 2303010.8114754097
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | -- intersect: -2554486942.820288
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | intersect: -2554486942.820288
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | chi2: 0.031245843199438333
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | current chi2=0.031245843199438333 (change=97.7749494634942 %)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | sum of deviations: 1458114842.0000007
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | mean x: 1760285571.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | mean y: 2301650.247863248
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | -- intersect: -5166270432.315729
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | intersect: -5166270432.315729
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | chi2: 0.004071450732258742
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | current chi2=0.004071450732258742 (change=86.96962438724672 %)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,731 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | sum of deviations: 858758915.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | mean x: 1760285723.5
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | mean y: 2303144.285714286
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | -- intersect: -3467913243.8522787
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | intersect: -3467913243.8522787
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | chi2: 0.0034206269613040203
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | current chi2=0.0034206269613040203 (change=15.985058244672917 %)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | left removable region: 30
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | sum of deviations: -266945882.00000006
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | mean x: 1760285998.0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | mean y: 2307058.7802197803
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | -- intersect: 2013511905.9495971
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | intersect: 2013511905.9495971
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | chi2: 0.001766753944455927
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | -- intersect: 2013511905.9495971
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | current memory leak: -1.14 B/s (using 91 data points, chi2=0.00)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,732 | INFO     | could have reported an average CPU frequency of 4478 MHz (8 samples)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | ..............................
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . Timing measurements:
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . get job = 0 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . initial setup = 1 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . payload setup = 6 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . stage-in = 0 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . payload execution = 7718 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . stage-out = 0 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | . log creation = 0 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,733 | INFO     | ..............................
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | 
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | job summary report
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | --------------------------------------------------
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | PanDA job id: 6839163313
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | task id: 46676269
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | errors: (none)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | pilot state: finished 
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | transexitcode: 0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | exeerrorcode: 0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | exeerrordiag: 
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | exitcode: 0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | exitmsg: OK
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | cpuconsumptiontime: 15047 s
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | nevents: 400
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | neventsw: 0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | pid: 2679936
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | pgrp: 2679936
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | corecount: 2
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | event service: False
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | sizes: {0: 2348860, 6: 2349122, 11: 2349150, 7728: 2376920, 7730: 2385980, 7738: 2386118}
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | --------------------------------------------------
[2025-10-12 19:13:34] 2025-10-12 17:12:31,763 | INFO     | 
[2025-10-12 19:13:34] 2025-10-12 17:12:31,764 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | job 6839163313 has completed (purged errors)
[2025-10-12 19:13:34] 2025-10-12 17:12:31,774 | INFO     | overall cleanup function is called
[2025-10-12 19:13:34] 2025-10-12 17:12:32,780 | INFO     | --- collectZombieJob: --- 10, [2679936]
[2025-10-12 19:13:34] 2025-10-12 17:12:32,780 | INFO     | zombie collector waiting for pid 2679936
[2025-10-12 19:13:34] 2025-10-12 17:12:32,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:13:34] 2025-10-12 17:12:32,781 | INFO     | collected zombie processes
[2025-10-12 19:13:34] 2025-10-12 17:12:32,781 | INFO     | will attempt to kill all subprocesses of pid=2679936
[2025-10-12 19:13:34] 2025-10-12 17:12:32,822 | INFO     | process IDs to be killed: [2679936] (in reverse order)
[2025-10-12 19:13:34] 2025-10-12 17:12:32,845 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:13:34] 2025-10-12 17:12:32,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:13:34] 2025-10-12 17:12:32,846 | INFO     | did not find any defunct processes belonging to 2679936
[2025-10-12 19:13:34] 2025-10-12 17:12:32,847 | INFO     | did not find any defunct processes belonging to 2679936
[2025-10-12 19:13:34] 2025-10-12 17:12:32,847 | INFO     | ready for new job
[2025-10-12 19:13:34] 2025-10-12 17:12:32,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:13:34] 2025-10-12 17:12:32,848 | INFO     | ***************************************
[2025-10-12 19:13:34] 2025-10-12 17:12:32,848 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:13:34] 2025-10-12 17:12:32,848 | INFO     | ***************************************
[2025-10-12 19:13:34] 2025-10-12 17:12:32,848 | INFO     | 
[2025-10-12 19:13:34] 2025-10-12 17:12:32,848 | INFO     | architecture information:
[2025-10-12 19:13:34] 2025-10-12 17:12:32,848 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:13:34] 2025-10-12 17:12:32,857 | INFO     | cat /etc/os-release:
[2025-10-12 19:13:34] NAME="CentOS Linux"
[2025-10-12 19:13:34] VERSION="7 (Core)"
[2025-10-12 19:13:34] ID="centos"
[2025-10-12 19:13:34] ID_LIKE="rhel fedora"
[2025-10-12 19:13:34] VERSION_ID="7"
[2025-10-12 19:13:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:13:34] ANSI_COLOR="0;31"
[2025-10-12 19:13:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:13:34] HOME_URL="https://www.centos.org/"
[2025-10-12 19:13:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:13:34] 
[2025-10-12 19:13:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:13:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:13:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:13:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:13:34] 
[2025-10-12 19:13:34] 2025-10-12 17:12:32,857 | INFO     | ***************************************
[2025-10-12 19:13:34] 2025-10-12 17:12:33,360 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 19:13:34] 2025-10-12 17:12:33,389 | INFO     | sufficient remaining disk space (183143235584 B)
[2025-10-12 19:13:34] 2025-10-12 17:12:33,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:13:34] 2025-10-12 17:12:33,390 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:13:34] 2025-10-12 17:12:33,390 | INFO     | update_server=False
[2025-10-12 19:13:34] 2025-10-12 17:12:33,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:13:34] 2025-10-12 17:12:33,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:13:34] 2025-10-12 17:12:33,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:13:34] 2025-10-12 17:12:33,392 | INFO     | aborting loop
[2025-10-12 19:13:34] 2025-10-12 17:12:33,439 | INFO     | all job control threads have been joined
[2025-10-12 19:13:34] 2025-10-12 17:12:33,463 | INFO     | all data control threads have been joined
[2025-10-12 19:13:34] 2025-10-12 17:12:33,741 | INFO     | all payload control threads have been joined
[2025-10-12 19:13:34] 2025-10-12 17:12:34,397 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,397 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,398 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,445 | INFO     | [job] control thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,469 | INFO     | [data] control thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:13:34] 2025-10-12 17:12:34,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:13:34] 2025-10-12 17:12:34,664 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,747 | INFO     | [payload] control thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:34,981 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:35,081 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:35,427 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:35,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:35,739 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:35,742 | INFO     | [job] validate thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:35,823 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:36,576 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:12:38,598 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:13:34] 2025-10-12 17:13:03,058 | INFO     | PID=2673503 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:13:34] 2025-10-12 17:13:03,058 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:13:34] 2025-10-12 17:13:03,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:13:34] 2025-10-12 17:13:03,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:13:34] 2025-10-12 17:13:27,265 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:13:34] 2025-10-12 17:13:28,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798678292288)>', '<ExcThread(monitor, started 139797821646592)>']
[2025-10-12 19:13:34] 2025-10-12 17:13:28,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:13:34] 2025-10-12 17:13:28,193 | INFO     | [monitor] control thread has ended
[2025-10-12 19:13:34] 2025-10-12 17:13:33,065 | INFO     | all workflow threads have been joined
[2025-10-12 19:13:34] 2025-10-12 17:13:33,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:13:34] 2025-10-12 17:13:33,066 | INFO     | traces error code: 0
[2025-10-12 19:13:34] 2025-10-12 17:13:33,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:13:34] 2025-10-12 17:13:33,109 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:13:34] 2025-10-12 17:13:33,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:13:34] 2025-10-12 17:13:33,113 [wrapper] pilotpid: 2673503
[2025-10-12 19:13:34] 2025-10-12 17:13:33,116 [wrapper] Pilot exit status: 0
[2025-10-12 19:13:34] 2025-10-12 17:13:33,121 [wrapper] pandaids: 6839163313
[2025-10-12 19:13:34] 2025-10-12 17:13:33,134 [wrapper] cleanup supervisor_pilot 2699873 2673504
[2025-10-12 19:13:34] 2025-10-12 17:13:33,136 [wrapper] Test setup, not cleaning
[2025-10-12 19:13:34] 2025-10-12 17:13:33,138 [wrapper] apfmon messages muted
[2025-10-12 19:13:34] 2025-10-12 17:13:33,140 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:13:34] 2025-10-12 17:13:33,142 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:13:34]  *** Error codes and diagnostics ***
[2025-10-12 19:13:34]     "exeErrorCode": 0,
[2025-10-12 19:13:34]     "exeErrorDiag": "",
[2025-10-12 19:13:34]     "pilotErrorCode": 0,
[2025-10-12 19:13:34]     "pilotErrorDiag": "",
[2025-10-12 19:13:34]  *** Listing of results directory ***
[2025-10-12 19:13:34] total 415476
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-12 19:13:34] -rwx------ 1 boinc boinc     36292 Oct 12 02:22 runpilot2-wrapper.sh
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:22 queuedata.json
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc       100 Oct 12 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:13:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 17:03 run_atlas
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc       105 Oct 12 17:03 job.xml
[2025-10-12 19:13:34] -rw-r--r-- 2 boinc boinc 222927020 Oct 12 17:03 EVNT.46676267._002753.pool.root.1
[2025-10-12 19:13:34] -rw-r--r-- 2 boinc boinc    569680 Oct 12 17:03 input.tar.gz
[2025-10-12 19:13:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:03 start_atlas.sh
[2025-10-12 19:13:34] drwxrwx--x 2 boinc boinc      4096 Oct 12 17:03 shared
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:03 boinc_setup_complete
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc      6210 Oct 12 17:03 init_data.xml
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:03 boinc_lockfile
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc      2550 Oct 12 17:03 pandaJob.out
[2025-10-12 19:13:34] -rw------- 1 boinc boinc    975528 Oct 12 17:03 agis_schedconf.cvmfs.json
[2025-10-12 19:13:34] -rw------- 1 boinc boinc   1560580 Oct 12 17:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:13:34] drwx------ 5 boinc boinc      4096 Oct 12 17:03 pilot3
[2025-10-12 19:13:34] -rw------- 1 boinc boinc 195844150 Oct 12 19:12 HITS.46676269._067477.pool.root.1
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:12 boinc_task_state.xml
[2025-10-12 19:13:34] -rw------- 1 boinc boinc      1016 Oct 12 19:12 memory_monitor_summary.json
[2025-10-12 19:13:34] -rw------- 1 boinc boinc    270311 Oct 12 19:12 log.46676269._067477.job.log.tgz.1
[2025-10-12 19:13:34] -rw------- 1 boinc boinc      7760 Oct 12 19:12 heartbeat.json
[2025-10-12 19:13:34] -rw------- 1 boinc boinc        95 Oct 12 19:13 pilot_heartbeat.json
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:13 wrapper_checkpoint.txt
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:13 boinc_mmap_file
[2025-10-12 19:13:34] -rw------- 1 boinc boinc      4752 Oct 12 19:13 pilotlog.txt
[2025-10-12 19:13:34] -rw------- 1 boinc boinc   1117430 Oct 12 19:13 log.46676269._067477.job.log.1
[2025-10-12 19:13:34] -rw------- 1 boinc boinc       357 Oct 12 19:13 output.list
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:13 runtime_log
[2025-10-12 19:13:34] -rw------- 1 boinc boinc   1402880 Oct 12 19:13 result.tar.gz
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc      8797 Oct 12 19:13 runtime_log.err
[2025-10-12 19:13:34] -rw------- 1 boinc boinc       663 Oct 12 19:13 iDiKDmE2yR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdqSMDmV9oXrm.diag
[2025-10-12 19:13:34] -rw-r--r-- 1 boinc boinc     20880 Oct 12 19:13 stderr.txt
[2025-10-12 19:13:34] HITS file was successfully produced:
[2025-10-12 19:13:34] -rw------- 1 boinc boinc 195844150 Oct 12 19:12 shared/HITS.pool.root.1
[2025-10-12 19:13:34]  *** Contents of shared directory: ***
[2025-10-12 19:13:34] total 410916
[2025-10-12 19:13:34] -rw-r--r-- 2 boinc boinc 222927020 Oct 12 17:03 ATLAS.root_0
[2025-10-12 19:13:34] -rw-r--r-- 2 boinc boinc    569680 Oct 12 17:03 input.tar.gz
[2025-10-12 19:13:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:03 start_atlas.sh
[2025-10-12 19:13:34] -rw------- 1 boinc boinc 195844150 Oct 12 19:12 HITS.pool.root.1
[2025-10-12 19:13:34] -rw------- 1 boinc boinc   1402880 Oct 12 19:13 result.tar.gz
19:13:35 (2669788): run_atlas exited; CPU time 15090.230461
19:13:35 (2669788): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN