Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
04:08:31 (567122): wrapper (7.7.26015): starting
04:08:31 (567122): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 04:08:31] Arguments: --nthreads 6
[2025-10-13 04:08:31] Threads: 6
[2025-10-13 04:08:31] Checking for CVMFS
[2025-10-13 04:08:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:08:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:08:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:08:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:08:31] 2.11.5.0 4608 368 58136 151643 0 57 2855021 4194304 1316 130560 0 1395632 99.997 13443 495 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-10-13 04:08:31] CVMFS is ok
[2025-10-13 04:08:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:08:31] Checking for apptainer binary...
[2025-10-13 04:08:31] apptainer is not installed, using version from CVMFS
[2025-10-13 04:08:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:08:32] boinc-b450f
[2025-10-13 04:08:32] apptainer works
[2025-10-13 04:08:32] Set ATHENA_PROC_NUMBER=6
[2025-10-13 04:08:32] Set ATHENA_CORE_NUMBER=6
[2025-10-13 04:08:32] Starting ATLAS job with PandaID=6838989570
[2025-10-13 04:08:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:09:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:09:48]  storage_token=
[2025-10-13 05:09:48]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6838989570/log.46676269._065478.job.log.tgz.1
[2025-10-13 05:09:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/23/log.46676269._065478.job.log.tgz.1
[2025-10-13 05:09:48]  workdir=None
[2025-10-13 05:09:48] ]
[2025-10-13 05:09:48] 2025-10-13 03:08:47,894 | INFO     | transferring file log.46676269._065478.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6838989570/log.46676269._065478.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 05:09:48] 2025-10-13 03:08:47,895 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6838989570/log.46676269._065478.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-13 05:09:48] 2025-10-13 03:08:47,904 | INFO     | adding to output.list: log.46676269._065478.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/23/log.46676269._065478.job.log.tg
[2025-10-13 05:09:48] 2025-10-13 03:08:47,904 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:09:48] 2025-10-13 03:08:47,904 | INFO     | summary of transferred files:
[2025-10-13 05:09:48] 2025-10-13 03:08:47,904 | INFO     |  -- lfn=log.46676269._065478.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:09:48] 2025-10-13 03:08:47,905 | INFO     | stage-out finished correctly
[2025-10-13 05:09:48] 2025-10-13 03:08:47,973 | INFO     | time since job start (3611s) is within the limit (172800.0s)
[2025-10-13 05:09:48] 2025-10-13 03:08:49,892 | INFO     | monitor loop #277: job 0:6838989570 is in state 'finished'
[2025-10-13 05:09:48] 2025-10-13 03:08:49,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:09:48] 2025-10-13 03:08:49,976 | INFO     | time since job start (3613s) is within the limit (172800.0s)
[2025-10-13 05:09:48] 2025-10-13 03:08:50,363 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:09:48] 2025-10-13 03:08:51,981 | INFO     | time since job start (3615s) is within the limit (172800.0s)
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | job 6838989570 has state=finished
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | preparing for final server update for job 6838989570 in state='finished'
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | job 6838989570 has finished - writing final server update
[2025-10-13 05:09:48] 2025-10-13 03:08:52,127 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:09:48] 2025-10-13 03:08:52,128 | INFO     | executing command: lscpu
[2025-10-13 05:09:48] 2025-10-13 03:08:52,141 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:09:48] 2025-10-13 03:08:52,396 | INFO     | monitor loop #278: job 0:6838989570 is in state 'finished'
[2025-10-13 05:09:48] 2025-10-13 03:08:52,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:09:48] 2025-10-13 03:08:53,987 | INFO     | time since job start (3617s) is within the limit (172800.0s)
[2025-10-13 05:09:48] 2025-10-13 03:08:54,899 | INFO     | monitor loop #279: job 0:6838989570 is in state 'finished'
[2025-10-13 05:09:48] 2025-10-13 03:08:54,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:09:48] 2025-10-13 03:08:55,992 | INFO     | time since job start (3619s) is within the limit (172800.0s)
[2025-10-13 05:09:48] 2025-10-13 03:08:57,402 | INFO     | monitor loop #280: job 0:6838989570 is in state 'finished'
[2025-10-13 05:09:48] 2025-10-13 03:08:57,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:09:48] 2025-10-13 03:08:57,996 | INFO     | time since job start (3621s) is within the limit (172800.0s)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,692 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:09:48] 2025-10-13 03:08:58,694 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3924.0260416666665
[2025-10-13 05:09:48] 2025-10-13 03:08:58,696 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6838989570/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,697 | INFO     | extracted standard info from prmon json
[2025-10-13 05:09:48] 2025-10-13 03:08:58,697 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:09:48] 2025-10-13 03:08:58,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:09:48] 2025-10-13 03:08:58,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:09:48] 2025-10-13 03:08:58,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:09:48] 2025-10-13 03:08:58,698 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:09:48] 2025-10-13 03:08:58,698 | INFO     | sum of square deviations: 43584073.0
[2025-10-13 05:09:48] 2025-10-13 03:08:58,698 | INFO     | sum of deviations: -110571711.00000001
[2025-10-13 05:09:48] 2025-10-13 03:08:58,698 | INFO     | mean x: 1760323193.5
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | mean y: 2420631.576923077
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | -- intersect: 4468316864.319538
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | intersect: 4468316864.319538
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | chi2: 0.002864399367595564
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | -- intersect: 4468316864.319538
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | current memory leak: -2.54 B/s (using 52 data points, chi2=0.00)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | could have reported an average CPU frequency of 4008 MHz (5 samples)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | ..............................
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | . Timing measurements:
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | . get job = 0 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | . initial setup = 2 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,699 | INFO     | . payload setup = 1 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,700 | INFO     | . stage-in = 0 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,700 | INFO     | . payload execution = 3591 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,700 | INFO     | . stage-out = 0 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,700 | INFO     | . log creation = 0 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,700 | INFO     | ..............................
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | 
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | job summary report
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | --------------------------------------------------
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | PanDA job id: 6838989570
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | task id: 46676269
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | errors: (none)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | pilot state: finished 
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | transexitcode: 0
[2025-10-13 05:09:48] 2025-10-13 03:08:58,762 | INFO     | exeerrorcode: 0
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | exeerrordiag: 
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | exitcode: 0
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | exitmsg: OK
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | cpuconsumptiontime: 20550 s
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | nevents: 400
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | neventsw: 0
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | pid: 581724
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | pgrp: 581724
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | corecount: 6
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | event service: False
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | sizes: {0: 2348864, 1: 2348864, 2: 2349154, 11: 2349182, 3598: 2375011, 3599: 2384023, 3602: 2384207, 3610: 2384433}
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | --------------------------------------------------
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | 
[2025-10-13 05:09:48] 2025-10-13 03:08:58,763 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-13 05:09:48] 2025-10-13 03:08:58,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:09:48] 2025-10-13 03:08:58,774 | INFO     | job 6838989570 has completed (purged errors)
[2025-10-13 05:09:48] 2025-10-13 03:08:58,774 | INFO     | overall cleanup function is called
[2025-10-13 05:09:48] 2025-10-13 03:08:59,776 | INFO     | --- collectZombieJob: --- 10, [581724]
[2025-10-13 05:09:48] 2025-10-13 03:08:59,776 | INFO     | zombie collector waiting for pid 581724
[2025-10-13 05:09:48] 2025-10-13 03:08:59,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:09:48] 2025-10-13 03:08:59,776 | INFO     | collected zombie processes
[2025-10-13 05:09:48] 2025-10-13 03:08:59,776 | INFO     | will attempt to kill all subprocesses of pid=581724
[2025-10-13 05:09:48] 2025-10-13 03:08:59,853 | INFO     | process IDs to be killed: [581724] (in reverse order)
[2025-10-13 05:09:48] 2025-10-13 03:08:59,876 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:09:48] 2025-10-13 03:08:59,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:09:48] 2025-10-13 03:08:59,878 | INFO     | did not find any defunct processes belonging to 581724
[2025-10-13 05:09:48] 2025-10-13 03:08:59,880 | INFO     | did not find any defunct processes belonging to 581724
[2025-10-13 05:09:48] 2025-10-13 03:08:59,880 | INFO     | ready for new job
[2025-10-13 05:09:48] 2025-10-13 03:08:59,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:09:48] 2025-10-13 03:08:59,881 | INFO     | ***************************************
[2025-10-13 05:09:48] 2025-10-13 03:08:59,881 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:09:48] 2025-10-13 03:08:59,881 | INFO     | ***************************************
[2025-10-13 05:09:48] 2025-10-13 03:08:59,881 | INFO     | 
[2025-10-13 05:09:48] 2025-10-13 03:08:59,882 | INFO     | architecture information:
[2025-10-13 05:09:48] 2025-10-13 03:08:59,882 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:09:48] 2025-10-13 03:08:59,889 | INFO     | cat /etc/os-release:
[2025-10-13 05:09:48] NAME="CentOS Linux"
[2025-10-13 05:09:48] VERSION="7 (Core)"
[2025-10-13 05:09:48] ID="centos"
[2025-10-13 05:09:48] ID_LIKE="rhel fedora"
[2025-10-13 05:09:48] VERSION_ID="7"
[2025-10-13 05:09:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:09:48] ANSI_COLOR="0;31"
[2025-10-13 05:09:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:09:48] HOME_URL="https://www.centos.org/"
[2025-10-13 05:09:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:09:48] 
[2025-10-13 05:09:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:09:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:09:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:09:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:09:48] 
[2025-10-13 05:09:48] 2025-10-13 03:08:59,889 | INFO     | ***************************************
[2025-10-13 05:09:48] 2025-10-13 03:09:00,392 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-13 05:09:48] 2025-10-13 03:09:00,400 | INFO     | sufficient remaining disk space (16968056832 B)
[2025-10-13 05:09:48] 2025-10-13 03:09:00,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:09:48] 2025-10-13 03:09:00,400 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:09:48] 2025-10-13 03:09:00,401 | INFO     | update_server=False
[2025-10-13 05:09:48] 2025-10-13 03:09:00,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:09:48] 2025-10-13 03:09:00,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:09:48] 2025-10-13 03:09:00,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:09:48] 2025-10-13 03:09:00,906 | INFO     | aborting loop
[2025-10-13 05:09:48] 2025-10-13 03:09:00,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:09:48] 2025-10-13 03:09:00,980 | INFO     | all data control threads have been joined
[2025-10-13 05:09:48] 2025-10-13 03:09:00,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:09:48] 2025-10-13 03:09:01,377 | INFO     | all job control threads have been joined
[2025-10-13 05:09:48] 2025-10-13 03:09:01,406 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,406 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,456 | INFO     | [job] validate thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,491 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,532 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,896 | INFO     | all payload control threads have been joined
[2025-10-13 05:09:48] 2025-10-13 03:09:01,906 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,911 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:01,986 | INFO     | [data] control thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,375 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,382 | INFO     | [job] control thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,446 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,751 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,866 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,901 | INFO     | [payload] control thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:02,987 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:04,935 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:09:48] 2025-10-13 03:09:31,164 | INFO     | PID=570954 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:09:48] 2025-10-13 03:09:31,164 | INFO     | .. there are 3 such processes running
[2025-10-13 05:09:48] 2025-10-13 03:09:31,164 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:09:48] 2025-10-13 03:09:31,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:09:48] 2025-10-13 03:09:31,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:09:48] 2025-10-13 03:09:42,076 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:09:48] 2025-10-13 03:09:43,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075099809600)>', '<ExcThread(monitor, started 140074536638208)>']
[2025-10-13 05:09:48] 2025-10-13 03:09:44,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:09:48] 2025-10-13 03:09:44,226 | INFO     | [monitor] control thread has ended
[2025-10-13 05:09:48] 2025-10-13 03:09:48,866 | INFO     | all workflow threads have been joined
[2025-10-13 05:09:48] 2025-10-13 03:09:48,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:09:48] 2025-10-13 03:09:48,866 | INFO     | traces error code: 0
[2025-10-13 05:09:48] 2025-10-13 03:09:48,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:09:48] 2025-10-13 03:09:48,931 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:09:48] 2025-10-13 03:09:48,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:09:48] 2025-10-13 03:09:48,934 [wrapper] pilotpid: 570954
[2025-10-13 05:09:48] 2025-10-13 03:09:48,935 [wrapper] Pilot exit status: 0
[2025-10-13 05:09:48] 2025-10-13 03:09:48,941 [wrapper] pandaids: 6838989570
[2025-10-13 05:09:48] 2025-10-13 03:09:48,956 [wrapper] cleanup supervisor_pilot  655062 570955
[2025-10-13 05:09:48] 2025-10-13 03:09:48,957 [wrapper] Test setup, not cleaning
[2025-10-13 05:09:48] 2025-10-13 03:09:48,958 [wrapper] apfmon messages muted
[2025-10-13 05:09:48] 2025-10-13 03:09:48,959 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:09:48] 2025-10-13 03:09:48,961 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:09:48]  *** Error codes and diagnostics ***
[2025-10-13 05:09:48]     "exeErrorCode": 0,
[2025-10-13 05:09:48]     "exeErrorDiag": "",
[2025-10-13 05:09:48]     "pilotErrorCode": 0,
[2025-10-13 05:09:48]     "pilotErrorDiag": "",
[2025-10-13 05:09:48]  *** Listing of results directory ***
[2025-10-13 05:09:48] total 400871
[2025-10-13 05:09:48] -rw-r--r-- 1 boinc boinc    557409 Oct 11 23:39 pilot3.tar.gz
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:52 queuedata.json
[2025-10-13 05:09:49] -rwx------ 1 boinc boinc     36292 Oct 11 23:52 runpilot2-wrapper.sh
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:09:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:08 run_atlas
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:08 job.xml
[2025-10-13 05:09:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:08 start_atlas.sh
[2025-10-13 05:09:49] drwxrwx--x 2 boinc boinc         5 Oct 13 04:08 shared
[2025-10-13 05:09:49] -rw-r--r-- 2 boinc boinc    569681 Oct 13 04:08 input.tar.gz
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc      6795 Oct 13 04:08 init_data.xml
[2025-10-13 05:09:49] -rw-r--r-- 2 boinc boinc 221218557 Oct 13 04:08 EVNT.46676267._002630.pool.root.1
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:08 boinc_lockfile
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc      2550 Oct 13 04:08 pandaJob.out
[2025-10-13 05:09:49] -rw------- 1 boinc boinc    975595 Oct 13 04:08 agis_schedconf.cvmfs.json
[2025-10-13 05:09:49] -rw------- 1 boinc boinc   1560580 Oct 13 04:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:09:49] drwx------ 5 boinc boinc        22 Oct 13 04:08 pilot3
[2025-10-13 05:09:49] -rw------- 1 boinc boinc 187367009 Oct 13 05:08 HITS.46676269._065478.pool.root.1
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:08 boinc_task_state.xml
[2025-10-13 05:09:49] -rw------- 1 boinc boinc      1034 Oct 13 05:08 memory_monitor_summary.json
[2025-10-13 05:09:49] -rw------- 1 boinc boinc    288194 Oct 13 05:08 log.46676269._065478.job.log.tgz.1
[2025-10-13 05:09:49] -rw------- 1 boinc boinc      7758 Oct 13 05:08 heartbeat.json
[2025-10-13 05:09:49] -rw------- 1 boinc boinc        95 Oct 13 05:08 pilot_heartbeat.json
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:09 boinc_mmap_file
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:09 wrapper_checkpoint.txt
[2025-10-13 05:09:49] -rw------- 1 boinc boinc      4829 Oct 13 05:09 pilotlog.txt
[2025-10-13 05:09:49] -rw------- 1 boinc boinc    555529 Oct 13 05:09 log.46676269._065478.job.log.1
[2025-10-13 05:09:49] -rw------- 1 boinc boinc       357 Oct 13 05:09 output.list
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc      8802 Oct 13 05:09 runtime_log.err
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:09 runtime_log
[2025-10-13 05:09:49] -rw------- 1 boinc boinc    860160 Oct 13 05:09 result.tar.gz
[2025-10-13 05:09:49] -rw------- 1 boinc boinc       657 Oct 13 05:09 KYcNDmvgwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBeSMDmjtIFfn.diag
[2025-10-13 05:09:49] -rw-r--r-- 1 boinc boinc     21924 Oct 13 05:09 stderr.txt
[2025-10-13 05:09:49] HITS file was successfully produced:
[2025-10-13 05:09:49] -rw------- 1 boinc boinc 187367009 Oct 13 05:08 shared/HITS.pool.root.1
[2025-10-13 05:09:49]  *** Contents of shared directory: ***
[2025-10-13 05:09:49] total 399823
[2025-10-13 05:09:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:08 start_atlas.sh
[2025-10-13 05:09:49] -rw-r--r-- 2 boinc boinc    569681 Oct 13 04:08 input.tar.gz
[2025-10-13 05:09:49] -rw-r--r-- 2 boinc boinc 221218557 Oct 13 04:08 ATLAS.root_0
[2025-10-13 05:09:49] -rw------- 1 boinc boinc 187367009 Oct 13 05:08 HITS.pool.root.1
[2025-10-13 05:09:49] -rw------- 1 boinc boinc    860160 Oct 13 05:09 result.tar.gz
05:09:50 (567122): run_atlas exited; CPU time 20595.707258
05:09:50 (567122): called boinc_finish(0)

</stderr_txt>
]]>

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