Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:34:05 (14163): wrapper (7.7.26015): starting
01:34:05 (14163): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 01:34:05] Arguments: --nthreads 8
[2025-10-12 01:34:05] Threads: 8
[2025-10-12 01:34:05] Checking for CVMFS
[2025-10-12 01:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:34:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:34:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:34:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:34:06] 2.11.2.0 27562 268853 271436 151609 2 57 15562978 18432000 2749 130560 7 627127998 99.264 1123211062 26113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 01:34:06] CVMFS is ok
[2025-10-12 01:34:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:34:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:34:06] Further information can be found at the LHC@home message board.
[2025-10-12 01:34:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:34:06] Checking for apptainer binary...
[2025-10-12 01:34:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:34:06] Running /usr/bin/apptainer --version
[2025-10-12 01:34:06] apptainer version 1.3.2-1.el7
[2025-10-12 01:34:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:34:07] c-9-30.aglt2.org
[2025-10-12 01:34:07] apptainer works
[2025-10-12 01:34:07] Set ATHENA_PROC_NUMBER=8
[2025-10-12 01:34:07] Set ATHENA_CORE_NUMBER=8
[2025-10-12 01:34:07] Starting ATLAS job with PandaID=6839163964
[2025-10-12 01:34:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:16:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:16:40] 2025-10-12 08:15:40,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:16:40] 2025-10-12 08:15:40,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:16:40] 2025-10-12 08:15:40,472 | INFO     | fitting pss+swap vs Time
[2025-10-12 04:16:40] 2025-10-12 08:15:40,472 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,473 | INFO     | sum of deviations: -6118917685.999992
[2025-10-12 04:16:40] 2025-10-12 08:15:40,473 | INFO     | mean x: 1760252102.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,473 | INFO     | mean y: 2469277.389937107
[2025-10-12 04:16:40] 2025-10-12 08:15:40,473 | INFO     | -- intersect: 8644123095.775133
[2025-10-12 04:16:40] 2025-10-12 08:15:40,473 | INFO     | intersect: 8644123095.775133
[2025-10-12 04:16:40] 2025-10-12 08:15:40,474 | INFO     | chi2: 2.2361292439669778
[2025-10-12 04:16:40] 2025-10-12 08:15:40,474 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | sum of deviations: 4673939682.000003
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | mean x: 1760251949.5
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | mean y: 2483359.974025974
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | -- intersect: -7262517392.657048
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | intersect: -7262517392.657048
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | chi2: 1.424659990331148
[2025-10-12 04:16:40] 2025-10-12 08:15:40,475 | INFO     | current chi2=1.424659990331148 (change=36.28901396576937 %)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,476 | INFO     | sum of square deviations: 1025693650.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,476 | INFO     | sum of deviations: 4581815042.000002
[2025-10-12 04:16:40] 2025-10-12 08:15:40,476 | INFO     | mean x: 1760251797.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,476 | INFO     | mean y: 2483228.389261745
[2025-10-12 04:16:40] 2025-10-12 08:15:40,476 | INFO     | -- intersect: -7860632782.129213
[2025-10-12 04:16:40] 2025-10-12 08:15:40,476 | INFO     | intersect: -7860632782.129213
[2025-10-12 04:16:40] 2025-10-12 08:15:40,477 | INFO     | chi2: 1.4255931092670067
[2025-10-12 04:16:40] 2025-10-12 08:15:40,477 | INFO     | current chi2=1.4255931092670067 (change=-0.0654976585424901 %)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,477 | INFO     | right removable region: 148
[2025-10-12 04:16:40] 2025-10-12 08:15:40,477 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | sum of deviations: -27435361037.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | mean x: 1760252254.5
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | mean y: 2497355.896103896
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | -- intersect: 42647025672.35193
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | intersect: 42647025672.35193
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | chi2: 0.928798398967356
[2025-10-12 04:16:40] 2025-10-12 08:15:40,478 | INFO     | current chi2=0.928798398967356 (change=58.46401090307138 %)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,479 | INFO     | sum of square deviations: 1025693650.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,479 | INFO     | sum of deviations: -24154724795.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,479 | INFO     | mean x: 1760252407.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,479 | INFO     | mean y: 2492611.536912752
[2025-10-12 04:16:40] 2025-10-12 08:15:40,479 | INFO     | -- intersect: 41455817842.536766
[2025-10-12 04:16:40] 2025-10-12 08:15:40,480 | INFO     | intersect: 41455817842.536766
[2025-10-12 04:16:40] 2025-10-12 08:15:40,480 | INFO     | chi2: 0.9163150688020304
[2025-10-12 04:16:40] 2025-10-12 08:15:40,480 | INFO     | current chi2=0.9163150688020304 (change=1.3440301123693477 %)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,480 | INFO     | left removable region: 20
[2025-10-12 04:16:40] 2025-10-12 08:15:40,480 | INFO     | sum of square deviations: 650252192.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | sum of deviations: -4024836120.0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | mean x: 1760252376.5
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | mean y: 2492943.625
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | -- intersect: 10897846211.81212
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | intersect: 10897846211.81212
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | chi2: 0.023911474161443506
[2025-10-12 04:16:40] 2025-10-12 08:15:40,481 | INFO     | -- intersect: 10897846211.81212
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | current memory leak: -6.19 B/s (using 128 data points, chi2=0.02)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | ..............................
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . Timing measurements:
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . get job = 0 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . initial setup = 2 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . payload setup = 5 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . stage-in = 0 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . payload execution = 9651 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,482 | INFO     | . stage-out = 0 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,483 | INFO     | . log creation = 0 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,483 | INFO     | ..............................
[2025-10-12 04:16:40] 2025-10-12 08:15:40,551 | INFO     | 
[2025-10-12 04:16:40] 2025-10-12 08:15:40,552 | INFO     | job summary report
[2025-10-12 04:16:40] 2025-10-12 08:15:40,552 | INFO     | --------------------------------------------------
[2025-10-12 04:16:40] 2025-10-12 08:15:40,552 | INFO     | PanDA job id: 6839163964
[2025-10-12 04:16:40] 2025-10-12 08:15:40,552 | INFO     | task id: 46676269
[2025-10-12 04:16:40] 2025-10-12 08:15:40,552 | INFO     | errors: (none)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | pilot state: finished 
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | transexitcode: 0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | exeerrorcode: 0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | exeerrordiag: 
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | exitcode: 0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,553 | INFO     | exitmsg: OK
[2025-10-12 04:16:40] 2025-10-12 08:15:40,554 | INFO     | cpuconsumptiontime: 71369 s
[2025-10-12 04:16:40] 2025-10-12 08:15:40,554 | INFO     | nevents: 400
[2025-10-12 04:16:40] 2025-10-12 08:15:40,554 | INFO     | neventsw: 0
[2025-10-12 04:16:40] 2025-10-12 08:15:40,554 | INFO     | pid: 25809
[2025-10-12 04:16:40] 2025-10-12 08:15:40,554 | INFO     | pgrp: 25809
[2025-10-12 04:16:40] 2025-10-12 08:15:40,554 | INFO     | corecount: 8
[2025-10-12 04:16:40] 2025-10-12 08:15:40,555 | INFO     | event service: False
[2025-10-12 04:16:40] 2025-10-12 08:15:40,555 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 9660: 2377738, 9662: 2386792, 9667: 2386994}
[2025-10-12 04:16:40] 2025-10-12 08:15:40,555 | INFO     | --------------------------------------------------
[2025-10-12 04:16:40] 2025-10-12 08:15:40,555 | INFO     | 
[2025-10-12 04:16:40] 2025-10-12 08:15:40,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:16:40] 2025-10-12 08:15:40,575 | INFO     | job 6839163964 has completed (purged errors)
[2025-10-12 04:16:40] 2025-10-12 08:15:40,575 | INFO     | overall cleanup function is called
[2025-10-12 04:16:40] 2025-10-12 08:15:41,582 | INFO     | --- collectZombieJob: --- 10, [25809]
[2025-10-12 04:16:40] 2025-10-12 08:15:41,583 | INFO     | zombie collector waiting for pid 25809
[2025-10-12 04:16:40] 2025-10-12 08:15:41,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:16:40] 2025-10-12 08:15:41,583 | INFO     | collected zombie processes
[2025-10-12 04:16:40] 2025-10-12 08:15:41,583 | INFO     | will attempt to kill all subprocesses of pid=25809
[2025-10-12 04:16:40] 2025-10-12 08:15:41,852 | INFO     | process IDs to be killed: [25809] (in reverse order)
[2025-10-12 04:16:40] 2025-10-12 08:15:41,933 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:16:40] 2025-10-12 08:15:41,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:16:40] 2025-10-12 08:15:41,943 | INFO     | did not find any defunct processes belonging to 25809
[2025-10-12 04:16:40] 2025-10-12 08:15:41,954 | INFO     | did not find any defunct processes belonging to 25809
[2025-10-12 04:16:40] 2025-10-12 08:15:41,954 | INFO     | ready for new job
[2025-10-12 04:16:40] 2025-10-12 08:15:41,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:16:40] 2025-10-12 08:15:41,956 | INFO     | ***************************************
[2025-10-12 04:16:40] 2025-10-12 08:15:41,957 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:16:40] 2025-10-12 08:15:41,957 | INFO     | ***************************************
[2025-10-12 04:16:40] 2025-10-12 08:15:41,957 | INFO     | 
[2025-10-12 04:16:40] 2025-10-12 08:15:41,959 | INFO     | architecture information:
[2025-10-12 04:16:40] 2025-10-12 08:15:41,959 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:16:40] 2025-10-12 08:15:41,977 | INFO     | cat /etc/os-release:
[2025-10-12 04:16:40] NAME="CentOS Linux"
[2025-10-12 04:16:40] VERSION="7 (Core)"
[2025-10-12 04:16:40] ID="centos"
[2025-10-12 04:16:40] ID_LIKE="rhel fedora"
[2025-10-12 04:16:40] VERSION_ID="7"
[2025-10-12 04:16:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:16:40] ANSI_COLOR="0;31"
[2025-10-12 04:16:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:16:40] HOME_URL="https://www.centos.org/"
[2025-10-12 04:16:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:16:40] 
[2025-10-12 04:16:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:16:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:16:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:16:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:16:40] 
[2025-10-12 04:16:40] 2025-10-12 08:15:41,977 | INFO     | ***************************************
[2025-10-12 04:16:40] 2025-10-12 08:15:42,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 04:16:40] 2025-10-12 08:15:42,492 | INFO     | sufficient remaining disk space (104923660288 B)
[2025-10-12 04:16:40] 2025-10-12 08:15:42,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:16:40] 2025-10-12 08:15:42,493 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:16:40] 2025-10-12 08:15:42,493 | INFO     | update_server=False
[2025-10-12 04:16:40] 2025-10-12 08:15:42,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:16:40] 2025-10-12 08:15:42,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:16:40] 2025-10-12 08:15:42,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:16:40] 2025-10-12 08:15:42,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:16:40] 2025-10-12 08:15:42,494 | INFO     | aborting loop
[2025-10-12 04:16:40] 2025-10-12 08:15:43,050 | INFO     | all data control threads have been joined
[2025-10-12 04:16:40] 2025-10-12 08:15:43,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:16:40] 2025-10-12 08:15:43,500 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:43,500 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:43,501 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:43,563 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:43,582 | INFO     | all job control threads have been joined
[2025-10-12 04:16:40] 2025-10-12 08:15:43,761 | INFO     | all payload control threads have been joined
[2025-10-12 04:16:40] 2025-10-12 08:15:43,783 | INFO     | [job] validate thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:43,836 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,051 | INFO     | [data] control thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,064 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,587 | INFO     | [job] control thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,599 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,766 | INFO     | [payload] control thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,876 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:44,961 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:45,247 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:46,500 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:15:53,215 | INFO     | job.realtimelogging is not enabled
[2025-10-12 04:16:40] 2025-10-12 08:15:54,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:16:40] 2025-10-12 08:16:12,324 | INFO     | PID=19158 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 04:16:40] 2025-10-12 08:16:12,324 | INFO     | .. there are 4 such processes running
[2025-10-12 04:16:40] 2025-10-12 08:16:12,325 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:16:40] 2025-10-12 08:16:12,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:16:40] 2025-10-12 08:16:12,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:16:40] 2025-10-12 08:16:33,307 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:16:40] 2025-10-12 08:16:34,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487723734848)>', '<ExcThread(monitor, started 140486702528256)>']
[2025-10-12 04:16:40] 2025-10-12 08:16:35,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:16:40] 2025-10-12 08:16:35,455 | INFO     | [monitor] control thread has ended
[2025-10-12 04:16:40] 2025-10-12 08:16:39,761 | INFO     | all workflow threads have been joined
[2025-10-12 04:16:40] 2025-10-12 08:16:39,761 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:16:40] 2025-10-12 08:16:39,762 | INFO     | traces error code: 0
[2025-10-12 04:16:40] 2025-10-12 08:16:39,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:16:40] 2025-10-12 08:16:39,883 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:16:40] 2025-10-12 08:16:39,885 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:16:40] 2025-10-12 08:16:39,887 [wrapper] pilotpid: 19158
[2025-10-12 04:16:40] 2025-10-12 08:16:39,889 [wrapper] Pilot exit status: 0
[2025-10-12 04:16:40] 2025-10-12 08:16:39,899 [wrapper] pandaids: 6839163964
[2025-10-12 04:16:40] 2025-10-12 08:16:39,946 [wrapper] cleanup supervisor_pilot 25016 19159
[2025-10-12 04:16:40] 2025-10-12 08:16:39,949 [wrapper] Test setup, not cleaning
[2025-10-12 04:16:40] 2025-10-12 08:16:39,970 [wrapper] apfmon messages muted
[2025-10-12 04:16:40] 2025-10-12 08:16:39,972 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:16:40] 2025-10-12 08:16:39,974 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:16:40]  *** Error codes and diagnostics ***
[2025-10-12 04:16:40]     "exeErrorCode": 0,
[2025-10-12 04:16:40]     "exeErrorDiag": "",
[2025-10-12 04:16:40]     "pilotErrorCode": 0,
[2025-10-12 04:16:40]     "pilotErrorDiag": "",
[2025-10-12 04:16:40]  *** Listing of results directory ***
[2025-10-12 04:16:40] total 408980
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 04:16:40] -rwx------ 1 boincer umatlas     36292 Oct 11 20:30 runpilot2-wrapper.sh
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:30 queuedata.json
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 01:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:16:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 01:34 run_atlas
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 01:34 job.xml
[2025-10-12 04:16:40] -rw-r--r-- 2 boincer umatlas 220124248 Oct 12 01:34 EVNT.46676267._002771.pool.root.1
[2025-10-12 04:16:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:34 start_atlas.sh
[2025-10-12 04:16:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 01:34 shared
[2025-10-12 04:16:40] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 01:34 input.tar.gz
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 01:34 boinc_lockfile
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 01:34 pandaJob.out
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas    975528 Oct 12 01:34 agis_schedconf.cvmfs.json
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas   1560580 Oct 12 01:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:16:40] drwx------ 5 boincer umatlas      4096 Oct 12 01:34 pilot3
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas      6034 Oct 12 04:13 init_data.xml
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas 191241403 Oct 12 04:15 HITS.46676269._067668.pool.root.1
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 04:15 boinc_task_state.xml
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas      1046 Oct 12 04:15 memory_monitor_summary.json
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas    409899 Oct 12 04:15 log.46676269._067668.job.log.tgz.1
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas      7828 Oct 12 04:15 heartbeat.json
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas        95 Oct 12 04:16 pilot_heartbeat.json
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 04:16 boinc_mmap_file
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 04:16 wrapper_checkpoint.txt
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas      4894 Oct 12 04:16 pilotlog.txt
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas   1353064 Oct 12 04:16 log.46676269._067668.job.log.1
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas       357 Oct 12 04:16 output.list
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 04:16 runtime_log
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas   1781760 Oct 12 04:16 result.tar.gz
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas       657 Oct 12 04:16 UEMMDm29yR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmirSMDmqIHHzm.diag
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 04:16 runtime_log.err
[2025-10-12 04:16:40] -rw-r--r-- 1 boincer umatlas     20821 Oct 12 04:16 stderr.txt
[2025-10-12 04:16:40] HITS file was successfully produced:
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas 191241403 Oct 12 04:15 shared/HITS.pool.root.1
[2025-10-12 04:16:40]  *** Contents of shared directory: ***
[2025-10-12 04:16:40] total 404048
[2025-10-12 04:16:40] -rw-r--r-- 2 boincer umatlas 220124248 Oct 12 01:34 ATLAS.root_0
[2025-10-12 04:16:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:34 start_atlas.sh
[2025-10-12 04:16:40] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 01:34 input.tar.gz
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas 191241403 Oct 12 04:15 HITS.pool.root.1
[2025-10-12 04:16:40] -rw------- 1 boincer umatlas   1781760 Oct 12 04:16 result.tar.gz
04:16:41 (14163): run_atlas exited; CPU time 71661.262134
04:16:41 (14163): called boinc_finish(0)

</stderr_txt>
]]>

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