Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:14 (2864420): wrapper (7.7.26015): starting
21:38:14 (2864420): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:38:14] Arguments: --nthreads 3
[2025-10-12 21:38:14] Threads: 3
[2025-10-12 21:38:14] Checking for CVMFS
[2025-10-12 21:38:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:38:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:38:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:38:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:38:14] 2.9.2.0 1471922 4658 83316 151635 0 57 4343310 36864001 0 130560 0 3677232 99.991 161181 973 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:38:14] CVMFS is ok
[2025-10-12 21:38:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:38:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:38:14] Further information can be found at the LHC@home message board.
[2025-10-12 21:38:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:38:14] Checking for apptainer binary...
[2025-10-12 21:38:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:38:14] Running /usr/bin/apptainer --version
[2025-10-12 21:38:14] apptainer version 1.4.1-1.1
[2025-10-12 21:38:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:38:14] belleA265a
[2025-10-12 21:38:14] apptainer works
[2025-10-12 21:38:14] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:38:14] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:38:14] Starting ATLAS job with PandaID=6839163213
[2025-10-12 21:38:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:59:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:59:45]  lfn=log.46676269._067377.job.log.tgz.1
[2025-10-12 22:59:45]  mtime=0
[2025-10-12 22:59:45]  protocol_id=None
[2025-10-12 22:59:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 22:59:45]  replicas=None
[2025-10-12 22:59:45]  scope=mc23_13p6TeV
[2025-10-12 22:59:45]  status=None
[2025-10-12 22:59:45]  status_code=0
[2025-10-12 22:59:45]  storage_token=
[2025-10-12 22:59:45]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839163213/log.46676269._067377.job.log.tgz.1
[2025-10-12 22:59:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/c1/log.46676269._067377.job.log.tgz.1
[2025-10-12 22:59:45]  workdir=None
[2025-10-12 22:59:45] ]
[2025-10-12 22:59:45] 2025-10-12 20:59:06,730 | INFO     | transferring file log.46676269._067377.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839163213/log.46676269._067377.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 22:59:45] 2025-10-12 20:59:06,730 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839163213/log.46676269._067377.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0673
[2025-10-12 22:59:45] 2025-10-12 20:59:06,742 | INFO     | adding to output.list: log.46676269._067377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/c1/log.46676269._067377.job.log.tg
[2025-10-12 22:59:45] 2025-10-12 20:59:06,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:59:45] 2025-10-12 20:59:06,742 | INFO     | summary of transferred files:
[2025-10-12 22:59:45] 2025-10-12 20:59:06,742 | INFO     |  -- lfn=log.46676269._067377.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:59:45] 2025-10-12 20:59:06,742 | INFO     | stage-out finished correctly
[2025-10-12 22:59:45] 2025-10-12 20:59:07,391 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:59:45] 2025-10-12 20:59:08,202 | INFO     | time since job start (4848s) is within the limit (172800.0s)
[2025-10-12 22:59:45] 2025-10-12 20:59:08,755 | INFO     | job 6839163213 has state=finished
[2025-10-12 22:59:45] 2025-10-12 20:59:08,755 | INFO     | preparing for final server update for job 6839163213 in state='finished'
[2025-10-12 22:59:45] 2025-10-12 20:59:08,756 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:59:45] 2025-10-12 20:59:08,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:59:45] 2025-10-12 20:59:08,756 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:59:45] 2025-10-12 20:59:08,756 | INFO     | job 6839163213 has finished - writing final server update
[2025-10-12 22:59:45] 2025-10-12 20:59:08,756 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:59:45] 2025-10-12 20:59:08,757 | INFO     | executing command: lscpu
[2025-10-12 22:59:45] 2025-10-12 20:59:08,772 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:59:45] 2025-10-12 20:59:10,207 | INFO     | time since job start (4850s) is within the limit (172800.0s)
[2025-10-12 22:59:45] 2025-10-12 20:59:11,343 | WARNING  | process 2874585 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:59:45] 2025-10-12 20:59:11,343 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839163213/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:59:45] 2025-10-12 20:59:11,396 | INFO     | number of running child processes to parent process 2874585: 1
[2025-10-12 22:59:45] 2025-10-12 20:59:11,396 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:59:45] 2025-10-12 20:59:12,213 | INFO     | time since job start (4852s) is within the limit (172800.0s)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,306 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:59:45] 2025-10-12 20:59:13,307 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3502.673666666667
[2025-10-12 22:59:45] 2025-10-12 20:59:13,308 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839163213/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,308 | INFO     | extracted standard info from prmon json
[2025-10-12 22:59:45] 2025-10-12 20:59:13,308 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:59:45] 2025-10-12 20:59:13,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:59:45] 2025-10-12 20:59:13,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:59:45] 2025-10-12 20:59:13,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | sum of square deviations: 120605052.0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | sum of deviations: -10751719699.999998
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | mean x: 1760300420.0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | mean y: 2461845.02739726
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | -- intersect: 156930023251.26328
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | intersect: 156930023251.26328
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | chi2: 0.0647482110974502
[2025-10-12 22:59:45] 2025-10-12 20:59:13,309 | INFO     | -- intersect: 156930023251.26328
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | current memory leak: -89.15 B/s (using 73 data points, chi2=0.06)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | could have reported an average CPU frequency of 3861 MHz (6 samples)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | ..............................
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . Timing measurements:
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . get job = 0 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . initial setup = 1 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . payload setup = 2 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . stage-in = 0 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . payload execution = 4826 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . stage-out = 0 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | . log creation = 0 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,310 | INFO     | ..............................
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | 
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | job summary report
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | --------------------------------------------------
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | PanDA job id: 6839163213
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | task id: 46676269
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | errors: (none)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | pilot state: finished 
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | transexitcode: 0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | exeerrorcode: 0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | exeerrordiag: 
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | exitcode: 0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | exitmsg: OK
[2025-10-12 22:59:45] 2025-10-12 20:59:13,699 | INFO     | cpuconsumptiontime: 13799 s
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | nevents: 400
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | neventsw: 0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | pid: 2874585
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | pgrp: 2874585
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | corecount: 3
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | event service: False
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | sizes: {0: 2348859, 3: 2349121, 11: 2349149, 4832: 2375565, 4834: 2384625, 4840: 2384763}
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | --------------------------------------------------
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | 
[2025-10-12 22:59:45] 2025-10-12 20:59:13,700 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:59:45] 2025-10-12 20:59:13,715 | INFO     | job 6839163213 has completed (purged errors)
[2025-10-12 22:59:45] 2025-10-12 20:59:13,715 | INFO     | overall cleanup function is called
[2025-10-12 22:59:45] 2025-10-12 20:59:14,721 | INFO     | --- collectZombieJob: --- 10, [2874585]
[2025-10-12 22:59:45] 2025-10-12 20:59:14,722 | INFO     | zombie collector waiting for pid 2874585
[2025-10-12 22:59:45] 2025-10-12 20:59:14,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:59:45] 2025-10-12 20:59:14,722 | INFO     | collected zombie processes
[2025-10-12 22:59:45] 2025-10-12 20:59:14,722 | INFO     | will attempt to kill all subprocesses of pid=2874585
[2025-10-12 22:59:45] 2025-10-12 20:59:14,764 | INFO     | process IDs to be killed: [2874585] (in reverse order)
[2025-10-12 22:59:45] 2025-10-12 20:59:14,787 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:59:45] 2025-10-12 20:59:14,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:59:45] 2025-10-12 20:59:14,788 | INFO     | did not find any defunct processes belonging to 2874585
[2025-10-12 22:59:45] 2025-10-12 20:59:14,789 | INFO     | did not find any defunct processes belonging to 2874585
[2025-10-12 22:59:45] 2025-10-12 20:59:14,789 | INFO     | ready for new job
[2025-10-12 22:59:45] 2025-10-12 20:59:14,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:59:45] 2025-10-12 20:59:14,790 | INFO     | ***************************************
[2025-10-12 22:59:45] 2025-10-12 20:59:14,790 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:59:45] 2025-10-12 20:59:14,790 | INFO     | ***************************************
[2025-10-12 22:59:45] 2025-10-12 20:59:14,790 | INFO     | 
[2025-10-12 22:59:45] 2025-10-12 20:59:14,790 | INFO     | architecture information:
[2025-10-12 22:59:45] 2025-10-12 20:59:14,791 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:59:45] 2025-10-12 20:59:14,799 | INFO     | cat /etc/os-release:
[2025-10-12 22:59:45] NAME="CentOS Linux"
[2025-10-12 22:59:45] VERSION="7 (Core)"
[2025-10-12 22:59:45] ID="centos"
[2025-10-12 22:59:45] ID_LIKE="rhel fedora"
[2025-10-12 22:59:45] VERSION_ID="7"
[2025-10-12 22:59:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:59:45] ANSI_COLOR="0;31"
[2025-10-12 22:59:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:59:45] HOME_URL="https://www.centos.org/"
[2025-10-12 22:59:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:59:45] 
[2025-10-12 22:59:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:59:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:59:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:59:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:59:45] 
[2025-10-12 22:59:45] 2025-10-12 20:59:14,799 | INFO     | ***************************************
[2025-10-12 22:59:45] 2025-10-12 20:59:15,302 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 22:59:45] 2025-10-12 20:59:15,314 | INFO     | sufficient remaining disk space (355435806720 B)
[2025-10-12 22:59:45] 2025-10-12 20:59:15,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:59:45] 2025-10-12 20:59:15,314 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:59:45] 2025-10-12 20:59:15,314 | INFO     | update_server=False
[2025-10-12 22:59:45] 2025-10-12 20:59:15,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:59:45] 2025-10-12 20:59:15,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:59:45] 2025-10-12 20:59:15,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:59:45] 2025-10-12 20:59:15,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:59:45] 2025-10-12 20:59:15,315 | INFO     | aborting loop
[2025-10-12 22:59:45] 2025-10-12 20:59:15,472 | INFO     | all job control threads have been joined
[2025-10-12 22:59:45] 2025-10-12 20:59:15,573 | INFO     | all payload control threads have been joined
[2025-10-12 22:59:45] 2025-10-12 20:59:15,698 | INFO     | all data control threads have been joined
[2025-10-12 22:59:45] 2025-10-12 20:59:16,320 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,320 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,320 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,478 | INFO     | [job] control thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,579 | INFO     | [payload] control thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,591 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,704 | INFO     | [data] control thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:16,925 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,208 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,321 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,655 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,735 | INFO     | [job] validate thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,809 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,816 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:17,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:59:45] 2025-10-12 20:59:21,939 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:59:45] 2025-10-12 20:59:26,139 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:59:45] 2025-10-12 20:59:27,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475828049728)>', '<ExcThread(monitor, started 140475344344832)>']
[2025-10-12 22:59:45] 2025-10-12 20:59:32,159 | INFO     | all workflow threads have been joined
[2025-10-12 22:59:45] 2025-10-12 20:59:32,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:59:45] 2025-10-12 20:59:32,160 | INFO     | traces error code: 0
[2025-10-12 22:59:45] 2025-10-12 20:59:32,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:59:45] 2025-10-12 20:59:45,322 | INFO     | PID=2868143 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:59:45] 2025-10-12 20:59:45,322 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:59:45] 2025-10-12 20:59:45,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:59:45] 2025-10-12 20:59:45,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:59:45] 2025-10-12 20:59:45,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:59:45] 2025-10-12 20:59:45,322 | INFO     | [monitor] control thread has ended
[2025-10-12 22:59:45] 2025-10-12 20:59:45,368 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:59:45] 2025-10-12 20:59:45,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:59:45] 2025-10-12 20:59:45,373 [wrapper] pilotpid: 2868143
[2025-10-12 22:59:45] 2025-10-12 20:59:45,375 [wrapper] Pilot exit status: 0
[2025-10-12 22:59:45] 2025-10-12 20:59:45,382 [wrapper] pandaids: 6839163213
[2025-10-12 22:59:45] 2025-10-12 20:59:45,397 [wrapper] cleanup supervisor_pilot 2886759 2868144
[2025-10-12 22:59:45] 2025-10-12 20:59:45,400 [wrapper] Test setup, not cleaning
[2025-10-12 22:59:45] 2025-10-12 20:59:45,402 [wrapper] apfmon messages muted
[2025-10-12 22:59:45] 2025-10-12 20:59:45,404 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:59:45] 2025-10-12 20:59:45,406 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:59:45]  *** Error codes and diagnostics ***
[2025-10-12 22:59:45]     "exeErrorCode": 0,
[2025-10-12 22:59:45]     "exeErrorDiag": "",
[2025-10-12 22:59:45]     "pilotErrorCode": 0,
[2025-10-12 22:59:45]     "pilotErrorDiag": "",
[2025-10-12 22:59:45]  *** Listing of results directory ***
[2025-10-12 22:59:45] total 412580
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:09 queuedata.json
[2025-10-12 22:59:45] -rwx------ 1 boinc boinc     36292 Oct 12 02:09 runpilot2-wrapper.sh
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:59:45] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:38 run_atlas
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:38 job.xml
[2025-10-12 22:59:45] -rw-r--r-- 2 boinc boinc 222842077 Oct 12 21:38 EVNT.46676267._002747.pool.root.1
[2025-10-12 22:59:45] -rw-r--r-- 2 boinc boinc    569679 Oct 12 21:38 input.tar.gz
[2025-10-12 22:59:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:38 start_atlas.sh
[2025-10-12 22:59:45] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:38 shared
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:38 boinc_setup_complete
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc      6441 Oct 12 21:38 init_data.xml
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:38 boinc_lockfile
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc      2549 Oct 12 21:38 pandaJob.out
[2025-10-12 22:59:45] -rw------- 1 boinc boinc    975536 Oct 12 21:38 agis_schedconf.cvmfs.json
[2025-10-12 22:59:45] -rw------- 1 boinc boinc   1560580 Oct 12 21:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:59:45] drwx------ 5 boinc boinc      4096 Oct 12 21:38 pilot3
[2025-10-12 22:59:45] -rw------- 1 boinc boinc 193823657 Oct 12 22:58 HITS.46676269._067377.pool.root.1
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:58 boinc_task_state.xml
[2025-10-12 22:59:45] -rw------- 1 boinc boinc      1034 Oct 12 22:59 memory_monitor_summary.json
[2025-10-12 22:59:45] -rw------- 1 boinc boinc    242035 Oct 12 22:59 log.46676269._067377.job.log.tgz.1
[2025-10-12 22:59:45] -rw------- 1 boinc boinc      7775 Oct 12 22:59 heartbeat.json
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:59 wrapper_checkpoint.txt
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:59 boinc_mmap_file
[2025-10-12 22:59:45] -rw------- 1 boinc boinc       747 Oct 12 22:59 pilotlog.txt
[2025-10-12 22:59:45] -rw------- 1 boinc boinc        95 Oct 12 22:59 pilot_heartbeat.json
[2025-10-12 22:59:45] -rw------- 1 boinc boinc    713734 Oct 12 22:59 log.46676269._067377.job.log.1
[2025-10-12 22:59:45] -rw------- 1 boinc boinc       357 Oct 12 22:59 output.list
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:59 runtime_log
[2025-10-12 22:59:45] -rw------- 1 boinc boinc    972800 Oct 12 22:59 result.tar.gz
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc      8797 Oct 12 22:59 runtime_log.err
[2025-10-12 22:59:45] -rw------- 1 boinc boinc       662 Oct 12 22:59 REYMDmXpyR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPpSMDmjsQrum.diag
[2025-10-12 22:59:45] -rw-r--r-- 1 boinc boinc     21638 Oct 12 22:59 stderr.txt
[2025-10-12 22:59:45] HITS file was successfully produced:
[2025-10-12 22:59:45] -rw------- 1 boinc boinc 193823657 Oct 12 22:58 shared/HITS.pool.root.1
[2025-10-12 22:59:45]  *** Contents of shared directory: ***
[2025-10-12 22:59:45] total 408440
[2025-10-12 22:59:45] -rw-r--r-- 2 boinc boinc 222842077 Oct 12 21:38 ATLAS.root_0
[2025-10-12 22:59:45] -rw-r--r-- 2 boinc boinc    569679 Oct 12 21:38 input.tar.gz
[2025-10-12 22:59:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:38 start_atlas.sh
[2025-10-12 22:59:45] -rw------- 1 boinc boinc 193823657 Oct 12 22:58 HITS.pool.root.1
[2025-10-12 22:59:45] -rw------- 1 boinc boinc    972800 Oct 12 22:59 result.tar.gz
22:59:47 (2864420): run_atlas exited; CPU time 13816.781852
22:59:47 (2864420): called boinc_finish(0)

</stderr_txt>
]]>

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