Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
05:50:07 (516429): wrapper (7.7.26015): starting
05:50:07 (516429): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 05:50:07] Arguments: --nthreads 12
[2025-10-12 05:50:07] Threads: 12
[2025-10-12 05:50:07] Checking for CVMFS
[2025-10-12 05:50:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:50:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:50:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:50:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:50:07] 2.11.0.0 3299214 2663 83780 151609 2 188 5304342 6144001 13103 130560 0 52199577 100.000 94089 198 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 05:50:07] CVMFS is ok
[2025-10-12 05:50:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:50:07] Checking for apptainer binary...
[2025-10-12 05:50:07] apptainer is not installed, using version from CVMFS
[2025-10-12 05:50:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:50:08] radiat0r
[2025-10-12 05:50:08] apptainer works
[2025-10-12 05:50:08] Set ATHENA_PROC_NUMBER=12
[2025-10-12 05:50:08] Set ATHENA_CORE_NUMBER=12
[2025-10-12 05:50:08] Starting ATLAS job with PandaID=6838603125
[2025-10-12 05:50:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:37:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:37:44] 2025-10-12 06:36:57,235 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-6838603125/log.46676269._059882.job.log.tgz.1 /var/lib/boinc/slots/12/log.46676269._059882.j
[2025-10-12 06:37:44] 2025-10-12 06:36:57,266 | INFO     | adding to output.list: log.46676269._059882.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/18/log.46676269._059882.job.log.tg
[2025-10-12 06:37:44] 2025-10-12 06:36:57,267 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 06:37:44] 2025-10-12 06:36:57,267 | INFO     | summary of transferred files:
[2025-10-12 06:37:44] 2025-10-12 06:36:57,267 | INFO     |  -- lfn=log.46676269._059882.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 06:37:44] 2025-10-12 06:36:57,268 | INFO     | stage-out finished correctly
[2025-10-12 06:37:44] 2025-10-12 06:36:57,965 | INFO     | monitor loop #196: job 0:6838603125 is in state 'finished'
[2025-10-12 06:37:44] 2025-10-12 06:36:57,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:37:44] 2025-10-12 06:36:58,645 | INFO     | time since job start (2793s) is within the limit (172800.0s)
[2025-10-12 06:37:44] 2025-10-12 06:36:58,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 06:37:44] 2025-10-12 06:36:59,046 | INFO     | job 6838603125 has state=finished
[2025-10-12 06:37:44] 2025-10-12 06:36:59,046 | INFO     | preparing for final server update for job 6838603125 in state='finished'
[2025-10-12 06:37:44] 2025-10-12 06:36:59,047 | INFO     | this job has now completed (state=finished)
[2025-10-12 06:37:44] 2025-10-12 06:36:59,047 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 06:37:44] 2025-10-12 06:36:59,047 | INFO     | log transfer has been attempted: DONE
[2025-10-12 06:37:44] 2025-10-12 06:36:59,047 | INFO     | job 6838603125 has finished - writing final server update
[2025-10-12 06:37:44] 2025-10-12 06:36:59,047 | INFO     | total number of processed events: 400 (read)
[2025-10-12 06:37:44] 2025-10-12 06:36:59,050 | INFO     | executing command: lscpu
[2025-10-12 06:37:44] 2025-10-12 06:36:59,238 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 06:37:44] 2025-10-12 06:37:00,471 | INFO     | monitor loop #197: job 0:6838603125 is in state 'finished'
[2025-10-12 06:37:44] 2025-10-12 06:37:00,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:37:44] 2025-10-12 06:37:00,651 | INFO     | time since job start (2795s) is within the limit (172800.0s)
[2025-10-12 06:37:44] 2025-10-12 06:37:02,657 | INFO     | time since job start (2797s) is within the limit (172800.0s)
[2025-10-12 06:37:44] 2025-10-12 06:37:02,974 | INFO     | monitor loop #198: job 0:6838603125 is in state 'finished'
[2025-10-12 06:37:44] 2025-10-12 06:37:02,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:37:44] 2025-10-12 06:37:04,663 | INFO     | time since job start (2799s) is within the limit (172800.0s)
[2025-10-12 06:37:44] 2025-10-12 06:37:05,478 | INFO     | monitor loop #199: job 0:6838603125 is in state 'finished'
[2025-10-12 06:37:44] 2025-10-12 06:37:05,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:37:44] 2025-10-12 06:37:06,670 | INFO     | time since job start (2801s) is within the limit (172800.0s)
[2025-10-12 06:37:44] 2025-10-12 06:37:07,981 | INFO     | monitor loop #200: job 0:6838603125 is in state 'finished'
[2025-10-12 06:37:44] 2025-10-12 06:37:07,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:37:44] 2025-10-12 06:37:08,677 | INFO     | time since job start (2803s) is within the limit (172800.0s)
[2025-10-12 06:37:44] 2025-10-12 06:37:10,482 | INFO     | monitor loop #201: job 0:6838603125 is in state 'finished'
[2025-10-12 06:37:44] 2025-10-12 06:37:10,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:37:44] 2025-10-12 06:37:10,696 | INFO     | PID=521132 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:37:44] 2025-10-12 06:37:10,696 | INFO     | .. there are 17 such processes running
[2025-10-12 06:37:44] 2025-10-12 06:37:10,735 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 06:37:44] 2025-10-12 06:37:10,803 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2364.768335937499
[2025-10-12 06:37:44] 2025-10-12 06:37:10,879 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6838603125/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:37:44] 2025-10-12 06:37:10,880 | INFO     | extracted standard info from prmon json
[2025-10-12 06:37:44] 2025-10-12 06:37:10,880 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:37:44] 2025-10-12 06:37:10,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:37:44] 2025-10-12 06:37:10,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:37:44] 2025-10-12 06:37:10,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:37:44] 2025-10-12 06:37:10,882 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:37:44] 2025-10-12 06:37:10,882 | INFO     | sum of square deviations: 18381740.0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | sum of deviations: 222679158.0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | mean x: 1760249723.0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | mean y: 2644088.769230769
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | -- intersect: -21321285320.92611
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | intersect: -21321285320.92611
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | chi2: 0.0006296125346495815
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | -- intersect: -21321285320.92611
[2025-10-12 06:37:44] 2025-10-12 06:37:10,883 | INFO     | current memory leak: 12.11 B/s (using 39 data points, chi2=0.00)
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | could have reported an average CPU frequency of 2357 MHz (5 samples)
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | ..............................
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | . Timing measurements:
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | . get job = 0 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | . initial setup = 4 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | . payload setup = 8 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,884 | INFO     | . stage-in = 0 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,885 | INFO     | . payload execution = 2763 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,885 | INFO     | . stage-out = 0 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,885 | INFO     | . log creation = 0 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,885 | INFO     | ..............................
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | 
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | job summary report
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | --------------------------------------------------
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | PanDA job id: 6838603125
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | task id: 46676269
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | errors: (none)
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:37:44] 2025-10-12 06:37:10,985 | INFO     | pilot state: finished 
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | transexitcode: 0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | exeerrorcode: 0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | exeerrordiag: 
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | exitcode: 0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | exitmsg: OK
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | cpuconsumptiontime: 29068 s
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | nevents: 400
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | neventsw: 0
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | pid: 541362
[2025-10-12 06:37:44] 2025-10-12 06:37:10,986 | INFO     | pgrp: 541362
[2025-10-12 06:37:44] 2025-10-12 06:37:10,987 | INFO     | corecount: 12
[2025-10-12 06:37:44] 2025-10-12 06:37:10,987 | INFO     | event service: False
[2025-10-12 06:37:44] 2025-10-12 06:37:10,987 | INFO     | sizes: {0: 2348858, 7: 2349120, 11: 2349148, 2772: 2374482, 2774: 2383482, 2775: 2383538, 2787: 2383892}
[2025-10-12 06:37:44] 2025-10-12 06:37:10,987 | INFO     | --------------------------------------------------
[2025-10-12 06:37:44] 2025-10-12 06:37:10,987 | INFO     | 
[2025-10-12 06:37:44] 2025-10-12 06:37:10,987 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-12 06:37:44] 2025-10-12 06:37:11,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:37:44] 2025-10-12 06:37:11,020 | INFO     | job 6838603125 has completed (purged errors)
[2025-10-12 06:37:44] 2025-10-12 06:37:11,020 | INFO     | overall cleanup function is called
[2025-10-12 06:37:44] 2025-10-12 06:37:12,026 | INFO     | --- collectZombieJob: --- 10, [541362]
[2025-10-12 06:37:44] 2025-10-12 06:37:12,026 | INFO     | zombie collector waiting for pid 541362
[2025-10-12 06:37:44] 2025-10-12 06:37:12,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:37:44] 2025-10-12 06:37:12,027 | INFO     | collected zombie processes
[2025-10-12 06:37:44] 2025-10-12 06:37:12,027 | INFO     | will attempt to kill all subprocesses of pid=541362
[2025-10-12 06:37:44] 2025-10-12 06:37:12,899 | INFO     | process IDs to be killed: [541362] (in reverse order)
[2025-10-12 06:37:44] 2025-10-12 06:37:13,180 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:37:44] 2025-10-12 06:37:13,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:37:44] 2025-10-12 06:37:13,209 | INFO     | did not find any defunct processes belonging to 541362
[2025-10-12 06:37:44] 2025-10-12 06:37:13,236 | INFO     | did not find any defunct processes belonging to 541362
[2025-10-12 06:37:44] 2025-10-12 06:37:13,237 | INFO     | ready for new job
[2025-10-12 06:37:44] 2025-10-12 06:37:13,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:37:44] 2025-10-12 06:37:13,239 | INFO     | ***************************************
[2025-10-12 06:37:44] 2025-10-12 06:37:13,239 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:37:44] 2025-10-12 06:37:13,239 | INFO     | ***************************************
[2025-10-12 06:37:44] 2025-10-12 06:37:13,239 | INFO     | 
[2025-10-12 06:37:44] 2025-10-12 06:37:13,281 | INFO     | architecture information:
[2025-10-12 06:37:44] 2025-10-12 06:37:13,282 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:37:44] 2025-10-12 06:37:13,305 | INFO     | cat /etc/os-release:
[2025-10-12 06:37:44] NAME="CentOS Linux"
[2025-10-12 06:37:44] VERSION="7 (Core)"
[2025-10-12 06:37:44] ID="centos"
[2025-10-12 06:37:44] ID_LIKE="rhel fedora"
[2025-10-12 06:37:44] VERSION_ID="7"
[2025-10-12 06:37:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:37:44] ANSI_COLOR="0;31"
[2025-10-12 06:37:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:37:44] HOME_URL="https://www.centos.org/"
[2025-10-12 06:37:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:37:44] 
[2025-10-12 06:37:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:37:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:37:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:37:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:37:44] 
[2025-10-12 06:37:44] 2025-10-12 06:37:13,306 | INFO     | ***************************************
[2025-10-12 06:37:44] 2025-10-12 06:37:13,807 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-12 06:37:44] 2025-10-12 06:37:13,834 | INFO     | sufficient remaining disk space (1724307734528 B)
[2025-10-12 06:37:44] 2025-10-12 06:37:13,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:37:44] 2025-10-12 06:37:13,834 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:37:44] 2025-10-12 06:37:13,834 | INFO     | update_server=False
[2025-10-12 06:37:44] 2025-10-12 06:37:13,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:37:44] 2025-10-12 06:37:13,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:37:44] 2025-10-12 06:37:13,850 | INFO     | all payload control threads have been joined
[2025-10-12 06:37:44] 2025-10-12 06:37:13,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:37:44] 2025-10-12 06:37:13,991 | INFO     | aborting loop
[2025-10-12 06:37:44] 2025-10-12 06:37:14,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:37:44] 2025-10-12 06:37:14,058 | INFO     | all data control threads have been joined
[2025-10-12 06:37:44] 2025-10-12 06:37:14,562 | INFO     | all job control threads have been joined
[2025-10-12 06:37:44] 2025-10-12 06:37:14,838 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:14,854 | INFO     | [payload] control thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:14,994 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,062 | INFO     | [data] control thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,450 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,562 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,566 | INFO     | [job] control thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,838 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,858 | INFO     | [job] validate thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:15,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:37:44] 2025-10-12 06:37:16,030 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:16,066 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:16,237 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:16,284 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:17,000 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:18,038 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:37:44] 2025-10-12 06:37:29,007 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:37:44] 2025-10-12 06:37:29,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099913004864)>', '<ExcThread(monitor, started 140099475990272)>']
[2025-10-12 06:37:44] 2025-10-12 06:37:34,594 | INFO     | all workflow threads have been joined
[2025-10-12 06:37:44] 2025-10-12 06:37:34,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:37:44] 2025-10-12 06:37:34,595 | INFO     | traces error code: 0
[2025-10-12 06:37:44] 2025-10-12 06:37:34,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:37:44] 2025-10-12 06:37:43,742 | INFO     | PID=521132 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 06:37:44] 2025-10-12 06:37:43,743 | INFO     | .. there are 17 such processes running
[2025-10-12 06:37:44] 2025-10-12 06:37:43,743 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:37:44] 2025-10-12 06:37:43,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:37:44] 2025-10-12 06:37:43,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:37:44] 2025-10-12 06:37:43,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:37:44] 2025-10-12 06:37:43,743 | INFO     | [monitor] control thread has ended
[2025-10-12 06:37:44] 2025-10-12 06:37:43,914 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:37:44] 2025-10-12 06:37:43,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:37:44] 2025-10-12 06:37:43,920 [wrapper] pilotpid: 521132
[2025-10-12 06:37:44] 2025-10-12 06:37:43,922 [wrapper] Pilot exit status: 0
[2025-10-12 06:37:44] 2025-10-12 06:37:43,934 [wrapper] pandaids: 6838603125
[2025-10-12 06:37:44] 2025-10-12 06:37:44,109 [wrapper] cleanup supervisor_pilot  922072 521133
[2025-10-12 06:37:44] 2025-10-12 06:37:44,112 [wrapper] Test setup, not cleaning
[2025-10-12 06:37:44] 2025-10-12 06:37:44,117 [wrapper] apfmon messages muted
[2025-10-12 06:37:44] 2025-10-12 06:37:44,121 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:37:44] 2025-10-12 06:37:44,124 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:37:44]  *** Error codes and diagnostics ***
[2025-10-12 06:37:44]     "exeErrorCode": 0,
[2025-10-12 06:37:44]     "exeErrorDiag": "",
[2025-10-12 06:37:44]     "pilotErrorCode": 0,
[2025-10-12 06:37:44]     "pilotErrorDiag": "",
[2025-10-12 06:37:44]  *** Listing of results directory ***
[2025-10-12 06:37:44] total 398572
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:05 queuedata.json
[2025-10-12 06:37:44] -rwx------ 1 boinc boinc     36292 Oct 11 15:05 runpilot2-wrapper.sh
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc    557409 Oct 11 15:05 pilot3.tar.gz
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc       100 Oct 12 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:37:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 05:50 run_atlas
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc       105 Oct 12 05:50 job.xml
[2025-10-12 06:37:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:50 start_atlas.sh
[2025-10-12 06:37:44] drwxrwx--x 2 boinc boinc      4096 Oct 12 05:50 shared
[2025-10-12 06:37:44] -rw-r--r-- 2 boinc boinc    569675 Oct 12 05:50 input.tar.gz
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc      9396 Oct 12 05:50 init_data.xml
[2025-10-12 06:37:44] -rw-r--r-- 2 boinc boinc 224107951 Oct 12 05:50 EVNT.46676267._002388.pool.root.1
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:50 boinc_setup_complete
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:50 boinc_lockfile
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc      2550 Oct 12 05:50 pandaJob.out
[2025-10-12 06:37:44] -rw------- 1 boinc boinc    975528 Oct 12 05:50 agis_schedconf.cvmfs.json
[2025-10-12 06:37:44] -rw------- 1 boinc boinc   1560580 Oct 12 05:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:37:44] drwx------ 5 boinc boinc      4096 Oct 12 05:50 pilot3
[2025-10-12 06:37:44] -rw------- 1 boinc boinc 178567809 Oct 12 06:36 HITS.46676269._059882.pool.root.1
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc       529 Oct 12 06:36 boinc_task_state.xml
[2025-10-12 06:37:44] -rw------- 1 boinc boinc      1041 Oct 12 06:36 memory_monitor_summary.json
[2025-10-12 06:37:44] -rw------- 1 boinc boinc    353523 Oct 12 06:36 log.46676269._059882.job.log.tgz.1
[2025-10-12 06:37:44] -rw------- 1 boinc boinc        95 Oct 12 06:37 pilot_heartbeat.json
[2025-10-12 06:37:44] -rw------- 1 boinc boinc      7742 Oct 12 06:37 heartbeat.json
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc      8192 Oct 12 06:37 boinc_mmap_file
[2025-10-12 06:37:44] -rw------- 1 boinc boinc       822 Oct 12 06:37 pilotlog.txt
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc        27 Oct 12 06:37 wrapper_checkpoint.txt
[2025-10-12 06:37:44] -rw------- 1 boinc boinc    422878 Oct 12 06:37 log.46676269._059882.job.log.1
[2025-10-12 06:37:44] -rw------- 1 boinc boinc       357 Oct 12 06:37 output.list
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc       620 Oct 12 06:37 runtime_log
[2025-10-12 06:37:44] -rw------- 1 boinc boinc    798720 Oct 12 06:37 result.tar.gz
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc      8672 Oct 12 06:37 runtime_log.err
[2025-10-12 06:37:44] -rw------- 1 boinc boinc       644 Oct 12 06:37 d5aLDm2KqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmj7RMDmdYctEm.diag
[2025-10-12 06:37:44] -rw-r--r-- 1 boinc boinc     22162 Oct 12 06:37 stderr.txt
[2025-10-12 06:37:44] HITS file was successfully produced:
[2025-10-12 06:37:44] -rw------- 1 boinc boinc 178567809 Oct 12 06:36 shared/HITS.pool.root.1
[2025-10-12 06:37:44]  *** Contents of shared directory: ***
[2025-10-12 06:37:44] total 394604
[2025-10-12 06:37:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:50 start_atlas.sh
[2025-10-12 06:37:44] -rw-r--r-- 2 boinc boinc    569675 Oct 12 05:50 input.tar.gz
[2025-10-12 06:37:44] -rw-r--r-- 2 boinc boinc 224107951 Oct 12 05:50 ATLAS.root_0
[2025-10-12 06:37:44] -rw------- 1 boinc boinc 178567809 Oct 12 06:36 HITS.pool.root.1
[2025-10-12 06:37:44] -rw------- 1 boinc boinc    798720 Oct 12 06:37 result.tar.gz
06:37:45 (516429): run_atlas exited; CPU time 29242.733362
06:37:45 (516429): called boinc_finish(0)

</stderr_txt>
]]>

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