Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:10:32 (23972): wrapper (7.7.26015): starting
01:10:32 (23972): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 01:10:32] Arguments: --nthreads 8
[2025-10-12 01:10:32] Threads: 8
[2025-10-12 01:10:32] Checking for CVMFS
[2025-10-12 01:10:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:10:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:10:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:10:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:10:32] 2.11.2.0 2923 205407 79556 151608 0 59 15046843 20275200 1 130560 3 73096746 99.976 10721407 9985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 01:10:32] CVMFS is ok
[2025-10-12 01:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:10:32] Further information can be found at the LHC@home message board.
[2025-10-12 01:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:10:32] Checking for apptainer binary...
[2025-10-12 01:10:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:10:32] Running /usr/bin/apptainer --version
[2025-10-12 01:10:32] apptainer version 1.3.2-1.el7
[2025-10-12 01:10:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:10:34] c-204-28.aglt2.org
[2025-10-12 01:10:34] apptainer works
[2025-10-12 01:10:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 01:10:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 01:10:34] Starting ATLAS job with PandaID=6839163125
[2025-10-12 01:10:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:21:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:21:10] 2025-10-12 07:20:29,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:21:10] 2025-10-12 07:20:29,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:21:10] 2025-10-12 07:20:29,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:21:10] 2025-10-12 07:20:29,841 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:21:10] 2025-10-12 07:20:29,842 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,842 | INFO     | sum of deviations: 15921907375.000011
[2025-10-12 03:21:10] 2025-10-12 07:20:29,842 | INFO     | mean x: 1760249726.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,843 | INFO     | mean y: 2487815.3622047245
[2025-10-12 03:21:10] 2025-10-12 07:20:29,843 | INFO     | -- intersect: -44124747516.19803
[2025-10-12 03:21:10] 2025-10-12 07:20:29,843 | INFO     | intersect: -44124747516.19803
[2025-10-12 03:21:10] 2025-10-12 07:20:29,843 | INFO     | chi2: 1.409221549774305
[2025-10-12 03:21:10] 2025-10-12 07:20:29,843 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,844 | INFO     | sum of deviations: 15439866129.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,844 | INFO     | mean x: 1760249573.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,844 | INFO     | mean y: 2486797.2540983604
[2025-10-12 03:21:10] 2025-10-12 07:20:29,844 | INFO     | -- intersect: -48268818408.599434
[2025-10-12 03:21:10] 2025-10-12 07:20:29,845 | INFO     | intersect: -48268818408.599434
[2025-10-12 03:21:10] 2025-10-12 07:20:29,845 | INFO     | chi2: 1.4105324506767822
[2025-10-12 03:21:10] 2025-10-12 07:20:29,845 | INFO     | current chi2=1.4105324506767822 (change=-0.09302305252762819 %)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,845 | INFO     | right removable region: 121
[2025-10-12 03:21:10] 2025-10-12 07:20:29,845 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,846 | INFO     | sum of deviations: -2662170692.5000014
[2025-10-12 03:21:10] 2025-10-12 07:20:29,846 | INFO     | mean x: 1760249878.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,846 | INFO     | mean y: 2526457.4344262294
[2025-10-12 03:21:10] 2025-10-12 07:20:29,846 | INFO     | -- intersect: 8325556929.093991
[2025-10-12 03:21:10] 2025-10-12 07:20:29,846 | INFO     | intersect: 8325556929.093991
[2025-10-12 03:21:10] 2025-10-12 07:20:29,847 | INFO     | chi2: 0.05124521752356166
[2025-10-12 03:21:10] 2025-10-12 07:20:29,847 | INFO     | current chi2=0.05124521752356166 (change=96.36357976985458 %)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,847 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,848 | INFO     | sum of deviations: -5396469310.000001
[2025-10-12 03:21:10] 2025-10-12 07:20:29,848 | INFO     | mean x: 1760250031.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,848 | INFO     | mean y: 2532603.324786325
[2025-10-12 03:21:10] 2025-10-12 07:20:29,848 | INFO     | -- intersect: 19130983037.41089
[2025-10-12 03:21:10] 2025-10-12 07:20:29,848 | INFO     | intersect: 19130983037.41089
[2025-10-12 03:21:10] 2025-10-12 07:20:29,848 | INFO     | chi2: 0.009618236398854164
[2025-10-12 03:21:10] 2025-10-12 07:20:29,849 | INFO     | current chi2=0.009618236398854164 (change=81.23095800221384 %)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,849 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,849 | INFO     | sum of deviations: -5210661205.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,849 | INFO     | mean x: 1760250183.5
[2025-10-12 03:21:10] 2025-10-12 07:20:29,850 | INFO     | mean y: 2532129.348214286
[2025-10-12 03:21:10] 2025-10-12 07:20:29,850 | INFO     | -- intersect: 21058216694.8507
[2025-10-12 03:21:10] 2025-10-12 07:20:29,850 | INFO     | intersect: 21058216694.8507
[2025-10-12 03:21:10] 2025-10-12 07:20:29,850 | INFO     | chi2: 0.008909711788953159
[2025-10-12 03:21:10] 2025-10-12 07:20:29,850 | INFO     | current chi2=0.008909711788953159 (change=7.366471154581028 %)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,850 | INFO     | left removable region: 30
[2025-10-12 03:21:10] 2025-10-12 07:20:29,851 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,851 | INFO     | sum of deviations: -3184227267.0000005
[2025-10-12 03:21:10] 2025-10-12 07:20:29,851 | INFO     | mean x: 1760250458.0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,851 | INFO     | mean y: 2527479.043956044
[2025-10-12 03:21:10] 2025-10-12 07:20:29,851 | INFO     | -- intersect: 23992423734.727028
[2025-10-12 03:21:10] 2025-10-12 07:20:29,851 | INFO     | intersect: 23992423734.727028
[2025-10-12 03:21:10] 2025-10-12 07:20:29,852 | INFO     | chi2: 0.00808624013924368
[2025-10-12 03:21:10] 2025-10-12 07:20:29,852 | INFO     | -- intersect: 23992423734.727028
[2025-10-12 03:21:10] 2025-10-12 07:20:29,852 | INFO     | current memory leak: -13.63 B/s (using 91 data points, chi2=0.01)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,852 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | ..............................
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . Timing measurements:
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . get job = 0 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . initial setup = 2 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . payload setup = 8 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . stage-in = 0 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . payload execution = 7739 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . stage-out = 0 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,853 | INFO     | . log creation = 0 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,854 | INFO     | ..............................
[2025-10-12 03:21:10] 2025-10-12 07:20:29,949 | INFO     | 
[2025-10-12 03:21:10] 2025-10-12 07:20:29,949 | INFO     | job summary report
[2025-10-12 03:21:10] 2025-10-12 07:20:29,949 | INFO     | --------------------------------------------------
[2025-10-12 03:21:10] 2025-10-12 07:20:29,949 | INFO     | PanDA job id: 6839163125
[2025-10-12 03:21:10] 2025-10-12 07:20:29,949 | INFO     | task id: 46676269
[2025-10-12 03:21:10] 2025-10-12 07:20:29,949 | INFO     | errors: (none)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | pilot state: finished 
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | transexitcode: 0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | exeerrorcode: 0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | exeerrordiag: 
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | exitcode: 0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | exitmsg: OK
[2025-10-12 03:21:10] 2025-10-12 07:20:29,950 | INFO     | cpuconsumptiontime: 56002 s
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | nevents: 400
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | neventsw: 0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | pid: 2391
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | pgrp: 2391
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | corecount: 8
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | event service: False
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7751: 2376805, 7752: 2376804, 7753: 2386042, 7761: 2386180}
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | --------------------------------------------------
[2025-10-12 03:21:10] 2025-10-12 07:20:29,951 | INFO     | 
[2025-10-12 03:21:10] 2025-10-12 07:20:29,952 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 03:21:10] 2025-10-12 07:20:29,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,979 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,979 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,979 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:21:10] 2025-10-12 07:20:29,982 | INFO     | job 6839163125 has completed (purged errors)
[2025-10-12 03:21:10] 2025-10-12 07:20:29,983 | INFO     | overall cleanup function is called
[2025-10-12 03:21:10] 2025-10-12 07:20:30,989 | INFO     | --- collectZombieJob: --- 10, [2391]
[2025-10-12 03:21:10] 2025-10-12 07:20:30,989 | INFO     | zombie collector waiting for pid 2391
[2025-10-12 03:21:10] 2025-10-12 07:20:30,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:21:10] 2025-10-12 07:20:30,990 | INFO     | collected zombie processes
[2025-10-12 03:21:10] 2025-10-12 07:20:30,990 | INFO     | will attempt to kill all subprocesses of pid=2391
[2025-10-12 03:21:10] 2025-10-12 07:20:31,088 | INFO     | process IDs to be killed: [2391] (in reverse order)
[2025-10-12 03:21:10] 2025-10-12 07:20:31,151 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:21:10] 2025-10-12 07:20:31,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:21:10] 2025-10-12 07:20:31,155 | INFO     | did not find any defunct processes belonging to 2391
[2025-10-12 03:21:10] 2025-10-12 07:20:31,159 | INFO     | did not find any defunct processes belonging to 2391
[2025-10-12 03:21:10] 2025-10-12 07:20:31,159 | INFO     | ready for new job
[2025-10-12 03:21:10] 2025-10-12 07:20:31,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:21:10] 2025-10-12 07:20:31,173 | INFO     | ***************************************
[2025-10-12 03:21:10] 2025-10-12 07:20:31,173 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:21:10] 2025-10-12 07:20:31,173 | INFO     | ***************************************
[2025-10-12 03:21:10] 2025-10-12 07:20:31,174 | INFO     | 
[2025-10-12 03:21:10] 2025-10-12 07:20:31,174 | INFO     | architecture information:
[2025-10-12 03:21:10] 2025-10-12 07:20:31,175 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:21:10] 2025-10-12 07:20:31,193 | INFO     | cat /etc/os-release:
[2025-10-12 03:21:10] NAME="CentOS Linux"
[2025-10-12 03:21:10] VERSION="7 (Core)"
[2025-10-12 03:21:10] ID="centos"
[2025-10-12 03:21:10] ID_LIKE="rhel fedora"
[2025-10-12 03:21:10] VERSION_ID="7"
[2025-10-12 03:21:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:21:10] ANSI_COLOR="0;31"
[2025-10-12 03:21:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:21:10] HOME_URL="https://www.centos.org/"
[2025-10-12 03:21:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:21:10] 
[2025-10-12 03:21:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:21:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:21:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:21:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:21:10] 
[2025-10-12 03:21:10] 2025-10-12 07:20:31,194 | INFO     | ***************************************
[2025-10-12 03:21:10] 2025-10-12 07:20:31,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 03:21:10] 2025-10-12 07:20:31,717 | INFO     | sufficient remaining disk space (18547212288 B)
[2025-10-12 03:21:10] 2025-10-12 07:20:31,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:21:10] 2025-10-12 07:20:31,717 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:21:10] 2025-10-12 07:20:31,717 | INFO     | update_server=False
[2025-10-12 03:21:10] 2025-10-12 07:20:31,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:21:10] 2025-10-12 07:20:31,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:21:10] 2025-10-12 07:20:31,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:21:10] 2025-10-12 07:20:31,719 | INFO     | aborting loop
[2025-10-12 03:21:10] 2025-10-12 07:20:31,800 | INFO     | all job control threads have been joined
[2025-10-12 03:21:10] 2025-10-12 07:20:31,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:21:10] 2025-10-12 07:20:32,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:21:10] 2025-10-12 07:20:32,108 | INFO     | all data control threads have been joined
[2025-10-12 03:21:10] 2025-10-12 07:20:32,584 | INFO     | all payload control threads have been joined
[2025-10-12 03:21:10] 2025-10-12 07:20:32,719 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:32,720 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:32,724 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:32,805 | INFO     | [job] control thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,113 | INFO     | [data] control thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,387 | INFO     | [job] validate thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,446 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,446 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,447 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,590 | INFO     | [payload] control thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,960 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:33,970 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:34,091 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:34,280 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:36,047 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:20:42,118 | INFO     | job.realtimelogging is not enabled
[2025-10-12 03:21:10] 2025-10-12 07:20:43,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:21:10] 2025-10-12 07:21:01,373 | INFO     | PID=27644 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 03:21:10] 2025-10-12 07:21:01,374 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:21:10] 2025-10-12 07:21:01,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:21:10] 2025-10-12 07:21:01,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:21:10] 2025-10-12 07:21:03,971 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:21:10] 2025-10-12 07:21:05,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447073838912)>', '<ExcThread(monitor, started 140445824837376)>']
[2025-10-12 03:21:10] 2025-10-12 07:21:05,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:21:10] 2025-10-12 07:21:05,388 | INFO     | [monitor] control thread has ended
[2025-10-12 03:21:10] 2025-10-12 07:21:10,059 | INFO     | all workflow threads have been joined
[2025-10-12 03:21:10] 2025-10-12 07:21:10,059 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:21:10] 2025-10-12 07:21:10,060 | INFO     | traces error code: 0
[2025-10-12 03:21:10] 2025-10-12 07:21:10,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:21:10] 2025-10-12 07:21:10,163 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:21:10] 2025-10-12 07:21:10,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:21:10] 2025-10-12 07:21:10,172 [wrapper] pilotpid: 27644
[2025-10-12 03:21:10] 2025-10-12 07:21:10,177 [wrapper] Pilot exit status: 0
[2025-10-12 03:21:10] 2025-10-12 07:21:10,196 [wrapper] pandaids: 6839163125
[2025-10-12 03:21:10] 2025-10-12 07:21:10,240 [wrapper] cleanup supervisor_pilot  3200 27645
[2025-10-12 03:21:10] 2025-10-12 07:21:10,244 [wrapper] Test setup, not cleaning
[2025-10-12 03:21:10] 2025-10-12 07:21:10,249 [wrapper] apfmon messages muted
[2025-10-12 03:21:10] 2025-10-12 07:21:10,253 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:21:10] 2025-10-12 07:21:10,257 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:21:10]  *** Error codes and diagnostics ***
[2025-10-12 03:21:10]     "exeErrorCode": 0,
[2025-10-12 03:21:10]     "exeErrorDiag": "",
[2025-10-12 03:21:10]     "pilotErrorCode": 0,
[2025-10-12 03:21:10]     "pilotErrorDiag": "",
[2025-10-12 03:21:10]  *** Listing of results directory ***
[2025-10-12 03:21:10] total 414092
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 19:21 pilot3.tar.gz
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 19:51 queuedata.json
[2025-10-12 03:21:10] -rwx------ 1 boincer umatlas     36292 Oct 11 19:52 runpilot2-wrapper.sh
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas       100 Oct 12 01:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:21:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 01:10 run_atlas
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas       105 Oct 12 01:10 job.xml
[2025-10-12 03:21:10] -rw-r--r-- 2 boincer umatlas 222338019 Oct 12 01:10 EVNT.46676267._002739.pool.root.1
[2025-10-12 03:21:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:10 start_atlas.sh
[2025-10-12 03:21:10] drwxrwx--x 2 boincer umatlas      4096 Oct 12 01:10 shared
[2025-10-12 03:21:10] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 01:10 input.tar.gz
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas         0 Oct 12 01:10 boinc_lockfile
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 01:10 pandaJob.out
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas    975512 Oct 12 01:10 agis_schedconf.cvmfs.json
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas   1560580 Oct 12 01:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:21:10] drwx------ 5 boincer umatlas      4096 Oct 12 01:10 pilot3
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 03:09 init_data.xml
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas 194839854 Oct 12 03:19 HITS.46676269._067289.pool.root.1
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas       529 Oct 12 03:19 boinc_task_state.xml
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas      1049 Oct 12 03:20 memory_monitor_summary.json
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas    377080 Oct 12 03:20 log.46676269._067289.job.log.tgz.1
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas      7853 Oct 12 03:20 heartbeat.json
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas        95 Oct 12 03:21 pilot_heartbeat.json
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 03:21 boinc_mmap_file
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas        27 Oct 12 03:21 wrapper_checkpoint.txt
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas      4818 Oct 12 03:21 pilotlog.txt
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas   1094442 Oct 12 03:21 log.46676269._067289.job.log.1
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas       357 Oct 12 03:21 output.list
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas       620 Oct 12 03:21 runtime_log
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas   1495040 Oct 12 03:21 result.tar.gz
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 03:21 runtime_log.err
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas       659 Oct 12 03:21 5WPMDmRZyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm50hNDmmIVhqm.diag
[2025-10-12 03:21:10] -rw-r--r-- 1 boincer umatlas     20858 Oct 12 03:21 stderr.txt
[2025-10-12 03:21:10] HITS file was successfully produced:
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas 194839854 Oct 12 03:19 shared/HITS.pool.root.1
[2025-10-12 03:21:10]  *** Contents of shared directory: ***
[2025-10-12 03:21:10] total 409444
[2025-10-12 03:21:10] -rw-r--r-- 2 boincer umatlas 222338019 Oct 12 01:10 ATLAS.root_0
[2025-10-12 03:21:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:10 start_atlas.sh
[2025-10-12 03:21:10] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 01:10 input.tar.gz
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas 194839854 Oct 12 03:19 HITS.pool.root.1
[2025-10-12 03:21:10] -rw------- 1 boincer umatlas   1495040 Oct 12 03:21 result.tar.gz
03:21:11 (23972): run_atlas exited; CPU time 55937.475354
03:21:11 (23972): called boinc_finish(0)

</stderr_txt>
]]>

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