Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:05:48 (2918336): wrapper (7.7.26015): starting
15:05:48 (2918336): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 15:05:48] Arguments: --nthreads 3
[2025-10-12 15:05:48] Threads: 3
[2025-10-12 15:05:48] Checking for CVMFS
[2025-10-12 15:05:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:05:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:05:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:05:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:05:49] 2.9.2.0 2131560 2757 67316 151620 2 57 36830283 36864000 0 130560 0 2055903 99.990 94830 878 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 15:05:49] CVMFS is ok
[2025-10-12 15:05:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:05:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:05:49] Further information can be found at the LHC@home message board.
[2025-10-12 15:05:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:05:49] Checking for apptainer binary...
[2025-10-12 15:05:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:05:49] Running /usr/bin/apptainer --version
[2025-10-12 15:05:49] apptainer version 1.4.1-1.1
[2025-10-12 15:05:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:05:49] atlasA228
[2025-10-12 15:05:49] apptainer works
[2025-10-12 15:05:49] Set ATHENA_PROC_NUMBER=3
[2025-10-12 15:05:49] Set ATHENA_CORE_NUMBER=3
[2025-10-12 15:05:49] Starting ATLAS job with PandaID=6839163101
[2025-10-12 15:05:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:41:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:41:10] 2025-10-12 14:40:12,534 | INFO     | [payload] control thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:12,807 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:12,872 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:12,886 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:13,069 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:13,210 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:13,253 | INFO     | [job] validate thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:13,289 | INFO     | [job] control thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:13,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:41:10] 2025-10-12 14:40:13,352 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:17,359 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:21,195 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:41:10] 2025-10-12 14:40:22,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:41:10] 2025-10-12 14:40:41,947 | INFO     | PID=2922062 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:41:10] 2025-10-12 14:40:41,948 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:41:10] 2025-10-12 14:40:41,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:41:10] 2025-10-12 14:40:41,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:41:10] 2025-10-12 14:41:05,543 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:41:10] 2025-10-12 14:41:05,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628293097280)>', '<ExcThread(monitor, started 139627423848192)>']
[2025-10-12 16:41:10] 2025-10-12 14:41:06,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:41:10] 2025-10-12 14:41:06,075 | INFO     | [monitor] control thread has ended
[2025-10-12 16:41:10] 2025-10-12 14:41:10,825 | INFO     | all workflow threads have been joined
[2025-10-12 16:41:10] 2025-10-12 14:41:10,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:41:10] 2025-10-12 14:41:10,827 | INFO     | traces error code: 0
[2025-10-12 16:41:10] 2025-10-12 14:41:10,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:41:10] 2025-10-12 14:41:10,877 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:41:10] 2025-10-12 14:41:10,880 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:41:10] 2025-10-12 14:41:10,883 [wrapper] pilotpid: 2922062
[2025-10-12 16:41:10] 2025-10-12 14:41:10,885 [wrapper] Pilot exit status: 0
[2025-10-12 16:41:10] 2025-10-12 14:41:10,893 [wrapper] pandaids: 6839163101
[2025-10-12 16:41:10] 2025-10-12 14:41:10,911 [wrapper] cleanup supervisor_pilot 2940663 2922063
[2025-10-12 16:41:10] 2025-10-12 14:41:10,914 [wrapper] Test setup, not cleaning
[2025-10-12 16:41:10] 2025-10-12 14:41:10,917 [wrapper] apfmon messages muted
[2025-10-12 16:41:10] 2025-10-12 14:41:10,919 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:41:10] 2025-10-12 14:41:10,921 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:41:10]  *** Error codes and diagnostics ***
[2025-10-12 16:41:10]     "exeErrorCode": 0,
[2025-10-12 16:41:10]     "exeErrorDiag": "",
[2025-10-12 16:41:10]     "pilotErrorCode": 0,
[2025-10-12 16:41:10]     "pilotErrorDiag": "",
[2025-10-12 16:41:10]  *** Listing of results directory ***
[2025-10-12 16:41:10] total 418060
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 01:21 pilot3.tar.gz
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:51 queuedata.json
[2025-10-12 16:41:10] -rwx------ 1 boinc boinc     36292 Oct 12 01:52 runpilot2-wrapper.sh
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:41:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:05 run_atlas
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:05 job.xml
[2025-10-12 16:41:10] -rw-r--r-- 2 boinc boinc 221220177 Oct 12 15:05 EVNT.46676267._002738.pool.root.1
[2025-10-12 16:41:10] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:05 shared
[2025-10-12 16:41:10] -rw-r--r-- 2 boinc boinc    569678 Oct 12 15:05 input.tar.gz
[2025-10-12 16:41:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:05 start_atlas.sh
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:05 boinc_setup_complete
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc      6199 Oct 12 15:05 init_data.xml
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:05 boinc_lockfile
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc      2550 Oct 12 15:05 pandaJob.out
[2025-10-12 16:41:10] -rw------- 1 boinc boinc    975512 Oct 12 15:05 agis_schedconf.cvmfs.json
[2025-10-12 16:41:10] -rw------- 1 boinc boinc   1560580 Oct 12 15:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:41:10] drwx------ 5 boinc boinc      4096 Oct 12 15:05 pilot3
[2025-10-12 16:41:10] -rw------- 1 boinc boinc 200793708 Oct 12 16:39 HITS.46676269._067265.pool.root.1
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc       529 Oct 12 16:39 boinc_task_state.xml
[2025-10-12 16:41:10] -rw------- 1 boinc boinc      1019 Oct 12 16:39 memory_monitor_summary.json
[2025-10-12 16:41:10] -rw------- 1 boinc boinc    270905 Oct 12 16:40 log.46676269._067265.job.log.tgz.1
[2025-10-12 16:41:10] -rw------- 1 boinc boinc      7764 Oct 12 16:40 heartbeat.json
[2025-10-12 16:41:10] -rw------- 1 boinc boinc        95 Oct 12 16:40 pilot_heartbeat.json
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:40 boinc_mmap_file
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc        27 Oct 12 16:40 wrapper_checkpoint.txt
[2025-10-12 16:41:10] -rw------- 1 boinc boinc      4824 Oct 12 16:41 pilotlog.txt
[2025-10-12 16:41:10] -rw------- 1 boinc boinc    823621 Oct 12 16:41 log.46676269._067265.job.log.1
[2025-10-12 16:41:10] -rw------- 1 boinc boinc       357 Oct 12 16:41 output.list
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:41 runtime_log
[2025-10-12 16:41:10] -rw------- 1 boinc boinc   1116160 Oct 12 16:41 result.tar.gz
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc      8792 Oct 12 16:41 runtime_log.err
[2025-10-12 16:41:10] -rw------- 1 boinc boinc       661 Oct 12 16:41 eCFKDmQZyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj0hNDmoJZbhm.diag
[2025-10-12 16:41:10] -rw-r--r-- 1 boinc boinc      6037 Oct 12 16:41 stderr.txt
[2025-10-12 16:41:10] HITS file was successfully produced:
[2025-10-12 16:41:10] -rw------- 1 boinc boinc 200793708 Oct 12 16:39 shared/HITS.pool.root.1
[2025-10-12 16:41:10]  *** Contents of shared directory: ***
[2025-10-12 16:41:10] total 413796
[2025-10-12 16:41:10] -rw-r--r-- 2 boinc boinc 221220177 Oct 12 15:05 ATLAS.root_0
[2025-10-12 16:41:10] -rw-r--r-- 2 boinc boinc    569678 Oct 12 15:05 input.tar.gz
[2025-10-12 16:41:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:05 start_atlas.sh
[2025-10-12 16:41:10] -rw------- 1 boinc boinc 200793708 Oct 12 16:39 HITS.pool.root.1
[2025-10-12 16:41:10] -rw------- 1 boinc boinc   1116160 Oct 12 16:41 result.tar.gz
16:41:12 (2918336): run_atlas exited; CPU time 16175.282122
16:41:12 (2918336): called boinc_finish(0)

</stderr_txt>
]]>

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