Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:07:35 (18351): wrapper (7.7.26015): starting
01:07:35 (18351): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 01:07:35] Arguments: --nthreads 12
[2025-10-12 01:07:35] Threads: 12
[2025-10-12 01:07:35] Checking for CVMFS
[2025-10-12 01:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:07:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:07:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:07:36] 2.11.2.0 3081 222394 98072 151608 1 59 14532021 20275200 1 130560 1 108252048 99.983 13143081 12465 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 01:07:36] CVMFS is ok
[2025-10-12 01:07:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:07:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:07:36] Further information can be found at the LHC@home message board.
[2025-10-12 01:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:07:36] Checking for apptainer binary...
[2025-10-12 01:07:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:07:36] Running /usr/bin/apptainer --version
[2025-10-12 01:07:36] apptainer version 1.3.2-1.el7
[2025-10-12 01:07:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:07:37] c-205-29.aglt2.org
[2025-10-12 01:07:37] apptainer works
[2025-10-12 01:07:37] Set ATHENA_PROC_NUMBER=12
[2025-10-12 01:07:37] Set ATHENA_CORE_NUMBER=12
[2025-10-12 01:07:37] Starting ATLAS job with PandaID=6839162714
[2025-10-12 01:07:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:25:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:25:06]  scope=mc23_13p6TeV
[2025-10-12 02:25:06]  status=None
[2025-10-12 02:25:06]  status_code=0
[2025-10-12 02:25:06]  storage_token=
[2025-10-12 02:25:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839162714/log.46676269._067137.job.log.tgz.1
[2025-10-12 02:25:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/04/log.46676269._067137.job.log.tgz.1
[2025-10-12 02:25:06]  workdir=None
[2025-10-12 02:25:06] ]
[2025-10-12 02:25:06] 2025-10-12 06:24:01,456 | INFO     | transferring file log.46676269._067137.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839162714/log.46676269._067137.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 02:25:06] 2025-10-12 06:24:01,457 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839162714/log.46676269._067137.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._067137.job
[2025-10-12 02:25:06] 2025-10-12 06:24:01,477 | INFO     | adding to output.list: log.46676269._067137.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/04/log.46676269._067137.job.log.tg
[2025-10-12 02:25:06] 2025-10-12 06:24:01,478 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 02:25:06] 2025-10-12 06:24:01,478 | INFO     | summary of transferred files:
[2025-10-12 02:25:06] 2025-10-12 06:24:01,478 | INFO     |  -- lfn=log.46676269._067137.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 02:25:06] 2025-10-12 06:24:01,479 | INFO     | stage-out finished correctly
[2025-10-12 02:25:06] 2025-10-12 06:24:02,783 | INFO     | time since job start (4570s) is within the limit (172800.0s)
[2025-10-12 02:25:06] 2025-10-12 06:24:02,822 | WARNING  | process 28932 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 02:25:06] 2025-10-12 06:24:02,822 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839162714/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:25:06] 2025-10-12 06:24:02,910 | INFO     | number of running child processes to parent process 28932: 1
[2025-10-12 02:25:06] 2025-10-12 06:24:02,910 | INFO     | maximum number of monitored processes: 6
[2025-10-12 02:25:06] 2025-10-12 06:24:03,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 02:25:06] 2025-10-12 06:24:03,196 | INFO     | job 6839162714 has state=finished
[2025-10-12 02:25:06] 2025-10-12 06:24:03,197 | INFO     | preparing for final server update for job 6839162714 in state='finished'
[2025-10-12 02:25:06] 2025-10-12 06:24:03,197 | INFO     | this job has now completed (state=finished)
[2025-10-12 02:25:06] 2025-10-12 06:24:03,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 02:25:06] 2025-10-12 06:24:03,197 | INFO     | log transfer has been attempted: DONE
[2025-10-12 02:25:06] 2025-10-12 06:24:03,197 | INFO     | job 6839162714 has finished - writing final server update
[2025-10-12 02:25:06] 2025-10-12 06:24:03,198 | INFO     | total number of processed events: 400 (read)
[2025-10-12 02:25:06] 2025-10-12 06:24:03,199 | INFO     | executing command: lscpu
[2025-10-12 02:25:06] 2025-10-12 06:24:03,226 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 02:25:06] 2025-10-12 06:24:03,914 | INFO     | PID=22418 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 02:25:06] 2025-10-12 06:24:04,915 | INFO     | time since job start (4572s) is within the limit (172800.0s)
[2025-10-12 02:25:06] 2025-10-12 06:24:05,414 | INFO     | monitor loop #340: job 0:6839162714 is in state 'finished'
[2025-10-12 02:25:06] 2025-10-12 06:24:05,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:25:06] 2025-10-12 06:24:06,920 | INFO     | time since job start (4574s) is within the limit (172800.0s)
[2025-10-12 02:25:06] 2025-10-12 06:24:07,917 | INFO     | monitor loop #341: job 0:6839162714 is in state 'finished'
[2025-10-12 02:25:06] 2025-10-12 06:24:07,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:25:06] 2025-10-12 06:24:07,985 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 02:25:06] 2025-10-12 06:24:07,988 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-12 02:25:06] 2025-10-12 06:24:07,991 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839162714/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:25:06] 2025-10-12 06:24:07,992 | INFO     | extracted standard info from prmon json
[2025-10-12 02:25:06] 2025-10-12 06:24:07,992 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 02:25:06] 2025-10-12 06:24:07,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:25:06] 2025-10-12 06:24:07,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:25:06] 2025-10-12 06:24:07,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:25:06] 2025-10-12 06:24:07,995 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:25:06] 2025-10-12 06:24:07,995 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 02:25:06] 2025-10-12 06:24:07,995 | INFO     | sum of deviations: 3204829467.9999995
[2025-10-12 02:25:06] 2025-10-12 06:24:07,995 | INFO     | mean x: 1760248050.5
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | mean y: 2661837.470588235
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | -- intersect: -57869214997.258
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | intersect: -57869214997.258
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | chi2: 0.02188276083072538
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | -- intersect: -57869214997.258
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | current memory leak: 32.88 B/s (using 68 data points, chi2=0.02)
[2025-10-12 02:25:06] 2025-10-12 06:24:07,996 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | ..............................
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . Timing measurements:
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . get job = 0 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . initial setup = 2 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . payload setup = 7 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . stage-in = 0 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . payload execution = 4540 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . stage-out = 0 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,997 | INFO     | . log creation = 0 s
[2025-10-12 02:25:06] 2025-10-12 06:24:07,998 | INFO     | ..............................
[2025-10-12 02:25:06] 2025-10-12 06:24:08,080 | INFO     | 
[2025-10-12 02:25:06] 2025-10-12 06:24:08,081 | INFO     | job summary report
[2025-10-12 02:25:06] 2025-10-12 06:24:08,081 | INFO     | --------------------------------------------------
[2025-10-12 02:25:06] 2025-10-12 06:24:08,081 | INFO     | PanDA job id: 6839162714
[2025-10-12 02:25:06] 2025-10-12 06:24:08,081 | INFO     | task id: 46676269
[2025-10-12 02:25:06] 2025-10-12 06:24:08,081 | INFO     | errors: (none)
[2025-10-12 02:25:06] 2025-10-12 06:24:08,081 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:25:06] 2025-10-12 06:24:08,082 | INFO     | pilot state: finished 
[2025-10-12 02:25:06] 2025-10-12 06:24:08,082 | INFO     | transexitcode: 0
[2025-10-12 02:25:06] 2025-10-12 06:24:08,082 | INFO     | exeerrorcode: 0
[2025-10-12 02:25:06] 2025-10-12 06:24:08,082 | INFO     | exeerrordiag: 
[2025-10-12 02:25:06] 2025-10-12 06:24:08,082 | INFO     | exitcode: 0
[2025-10-12 02:25:06] 2025-10-12 06:24:08,082 | INFO     | exitmsg: OK
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | cpuconsumptiontime: 47288 s
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | nevents: 400
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | neventsw: 0
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | pid: 28932
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | pgrp: 28932
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | corecount: 12
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | event service: False
[2025-10-12 02:25:06] 2025-10-12 06:24:08,083 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4551: 2375308, 4553: 2384306, 4554: 2384490, 4559: 2384684}
[2025-10-12 02:25:06] 2025-10-12 06:24:08,084 | INFO     | --------------------------------------------------
[2025-10-12 02:25:06] 2025-10-12 06:24:08,084 | INFO     | 
[2025-10-12 02:25:06] 2025-10-12 06:24:08,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 02:25:06] 2025-10-12 06:24:08,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:25:06] 2025-10-12 06:24:08,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:25:06] 2025-10-12 06:24:08,110 | INFO     | job 6839162714 has completed (purged errors)
[2025-10-12 02:25:06] 2025-10-12 06:24:08,110 | INFO     | overall cleanup function is called
[2025-10-12 02:25:06] 2025-10-12 06:24:09,118 | INFO     | --- collectZombieJob: --- 10, [28932]
[2025-10-12 02:25:06] 2025-10-12 06:24:09,118 | INFO     | zombie collector waiting for pid 28932
[2025-10-12 02:25:06] 2025-10-12 06:24:09,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:25:06] 2025-10-12 06:24:09,119 | INFO     | collected zombie processes
[2025-10-12 02:25:06] 2025-10-12 06:24:09,119 | INFO     | will attempt to kill all subprocesses of pid=28932
[2025-10-12 02:25:06] 2025-10-12 06:24:09,211 | INFO     | process IDs to be killed: [28932] (in reverse order)
[2025-10-12 02:25:06] 2025-10-12 06:24:09,264 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:25:06] 2025-10-12 06:24:09,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:25:06] 2025-10-12 06:24:09,268 | INFO     | did not find any defunct processes belonging to 28932
[2025-10-12 02:25:06] 2025-10-12 06:24:09,272 | INFO     | did not find any defunct processes belonging to 28932
[2025-10-12 02:25:06] 2025-10-12 06:24:09,272 | INFO     | ready for new job
[2025-10-12 02:25:06] 2025-10-12 06:24:09,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:25:06] 2025-10-12 06:24:09,274 | INFO     | ***************************************
[2025-10-12 02:25:06] 2025-10-12 06:24:09,274 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:25:06] 2025-10-12 06:24:09,274 | INFO     | ***************************************
[2025-10-12 02:25:06] 2025-10-12 06:24:09,274 | INFO     | 
[2025-10-12 02:25:06] 2025-10-12 06:24:09,275 | INFO     | architecture information:
[2025-10-12 02:25:06] 2025-10-12 06:24:09,276 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:25:06] 2025-10-12 06:24:09,291 | INFO     | cat /etc/os-release:
[2025-10-12 02:25:06] NAME="CentOS Linux"
[2025-10-12 02:25:06] VERSION="7 (Core)"
[2025-10-12 02:25:06] ID="centos"
[2025-10-12 02:25:06] ID_LIKE="rhel fedora"
[2025-10-12 02:25:06] VERSION_ID="7"
[2025-10-12 02:25:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:25:06] ANSI_COLOR="0;31"
[2025-10-12 02:25:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:25:06] HOME_URL="https://www.centos.org/"
[2025-10-12 02:25:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:25:06] 
[2025-10-12 02:25:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:25:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:25:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:25:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:25:06] 
[2025-10-12 02:25:06] 2025-10-12 06:24:09,291 | INFO     | ***************************************
[2025-10-12 02:25:06] 2025-10-12 06:24:09,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 02:25:06] 2025-10-12 06:24:09,813 | INFO     | sufficient remaining disk space (29363273728 B)
[2025-10-12 02:25:06] 2025-10-12 06:24:09,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:25:06] 2025-10-12 06:24:09,813 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:25:06] 2025-10-12 06:24:09,813 | INFO     | update_server=False
[2025-10-12 02:25:06] 2025-10-12 06:24:09,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:25:06] 2025-10-12 06:24:09,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:25:06] 2025-10-12 06:24:09,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:25:06] 2025-10-12 06:24:09,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:25:06] 2025-10-12 06:24:09,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:25:06] 2025-10-12 06:24:09,815 | INFO     | aborting loop
[2025-10-12 02:25:06] 2025-10-12 06:24:10,232 | INFO     | all data control threads have been joined
[2025-10-12 02:25:06] 2025-10-12 06:24:10,509 | INFO     | all payload control threads have been joined
[2025-10-12 02:25:06] 2025-10-12 06:24:10,816 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:10,821 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:10,822 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:10,975 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:11,101 | INFO     | all job control threads have been joined
[2025-10-12 02:25:06] 2025-10-12 06:24:11,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:11,238 | INFO     | [data] control thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:11,363 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:11,427 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:11,515 | INFO     | [payload] control thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:11,821 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:12,108 | INFO     | [job] control thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:12,110 | INFO     | [job] validate thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:12,167 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:12,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:12,412 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:13,821 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:25:06] 2025-10-12 06:24:40,135 | INFO     | PID=22418 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 02:25:06] 2025-10-12 06:24:40,135 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:25:06] 2025-10-12 06:24:40,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:25:06] 2025-10-12 06:24:40,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:25:06] 2025-10-12 06:24:59,096 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:25:06] 2025-10-12 06:25:00,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745479034688)>', '<ExcThread(monitor, started 139745166333696)>']
[2025-10-12 02:25:06] 2025-10-12 06:25:01,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:25:06] 2025-10-12 06:25:01,229 | INFO     | [monitor] control thread has ended
[2025-10-12 02:25:06] 2025-10-12 06:25:06,002 | INFO     | all workflow threads have been joined
[2025-10-12 02:25:06] 2025-10-12 06:25:06,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:25:06] 2025-10-12 06:25:06,003 | INFO     | traces error code: 0
[2025-10-12 02:25:06] 2025-10-12 06:25:06,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:25:06] 2025-10-12 06:25:06,114 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:25:06] 2025-10-12 06:25:06,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:25:06] 2025-10-12 06:25:06,121 [wrapper] pilotpid: 22418
[2025-10-12 02:25:06] 2025-10-12 06:25:06,124 [wrapper] Pilot exit status: 0
[2025-10-12 02:25:06] 2025-10-12 06:25:06,139 [wrapper] pandaids: 6839162714
[2025-10-12 02:25:06] 2025-10-12 06:25:06,186 [wrapper] cleanup supervisor_pilot 22990 22419
[2025-10-12 02:25:06] 2025-10-12 06:25:06,190 [wrapper] Test setup, not cleaning
[2025-10-12 02:25:06] 2025-10-12 06:25:06,195 [wrapper] apfmon messages muted
[2025-10-12 02:25:06] 2025-10-12 06:25:06,198 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:25:06] 2025-10-12 06:25:06,202 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:25:06]  *** Error codes and diagnostics ***
[2025-10-12 02:25:06]     "exeErrorCode": 0,
[2025-10-12 02:25:06]     "exeErrorDiag": "",
[2025-10-12 02:25:06]     "pilotErrorCode": 0,
[2025-10-12 02:25:06]     "pilotErrorDiag": "",
[2025-10-12 02:25:06]  *** Listing of results directory ***
[2025-10-12 02:25:06] total 413328
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 19:21 pilot3.tar.gz
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 19:41 queuedata.json
[2025-10-12 02:25:06] -rwx------ 1 boincer umatlas     36292 Oct 11 19:41 runpilot2-wrapper.sh
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas       100 Oct 12 01:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:25:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 01:07 run_atlas
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas       105 Oct 12 01:07 job.xml
[2025-10-12 02:25:06] -rw-r--r-- 2 boincer umatlas 220043003 Oct 12 01:07 EVNT.46676267._002723.pool.root.1
[2025-10-12 02:25:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:07 start_atlas.sh
[2025-10-12 02:25:06] drwxrwx--x 2 boincer umatlas      4096 Oct 12 01:07 shared
[2025-10-12 02:25:06] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 01:07 input.tar.gz
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas         0 Oct 12 01:07 boinc_lockfile
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 01:07 pandaJob.out
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas    975512 Oct 12 01:07 agis_schedconf.cvmfs.json
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas   1560580 Oct 12 01:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:25:06] drwx------ 5 boincer umatlas      4096 Oct 12 01:07 pilot3
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 02:20 init_data.xml
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas 197207414 Oct 12 02:23 HITS.46676269._067137.pool.root.1
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas       530 Oct 12 02:23 boinc_task_state.xml
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas        95 Oct 12 02:23 pilot_heartbeat.json
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas      1050 Oct 12 02:23 memory_monitor_summary.json
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas    387453 Oct 12 02:24 log.46676269._067137.job.log.tgz.1
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas      7855 Oct 12 02:24 heartbeat.json
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 02:24 boinc_mmap_file
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas        27 Oct 12 02:24 wrapper_checkpoint.txt
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas      4746 Oct 12 02:25 pilotlog.txt
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas    662583 Oct 12 02:25 log.46676269._067137.job.log.1
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas       357 Oct 12 02:25 output.list
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas       620 Oct 12 02:25 runtime_log
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas   1064960 Oct 12 02:25 result.tar.gz
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas       659 Oct 12 02:25 ZaKNDmLOyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtyhNDmNlwrqm.diag
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 02:25 runtime_log.err
[2025-10-12 02:25:06] -rw-r--r-- 1 boincer umatlas     22045 Oct 12 02:25 stderr.txt
[2025-10-12 02:25:06] HITS file was successfully produced:
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas 197207414 Oct 12 02:23 shared/HITS.pool.root.1
[2025-10-12 02:25:06]  *** Contents of shared directory: ***
[2025-10-12 02:25:06] total 409096
[2025-10-12 02:25:06] -rw-r--r-- 2 boincer umatlas 220043003 Oct 12 01:07 ATLAS.root_0
[2025-10-12 02:25:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:07 start_atlas.sh
[2025-10-12 02:25:06] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 01:07 input.tar.gz
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas 197207414 Oct 12 02:23 HITS.pool.root.1
[2025-10-12 02:25:06] -rw------- 1 boincer umatlas   1064960 Oct 12 02:25 result.tar.gz
02:25:07 (18351): run_atlas exited; CPU time 47269.065117
02:25:07 (18351): called boinc_finish(0)

</stderr_txt>
]]>

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