Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:04:06 (8115): wrapper (7.7.26015): starting
01:04:06 (8115): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 01:04:06] Arguments: --nthreads 8
[2025-10-12 01:04:06] Threads: 8
[2025-10-12 01:04:06] Checking for CVMFS
[2025-10-12 01:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:04:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:04:06] 2.11.2.0 2827 222437 88624 151608 0 59 14304030 20275201 1 130560 1 78341836 99.978 13309570 12183 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 01:04:06] CVMFS is ok
[2025-10-12 01:04:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:04:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:04:06] Further information can be found at the LHC@home message board.
[2025-10-12 01:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:04:06] Checking for apptainer binary...
[2025-10-12 01:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:04:06] Running /usr/bin/apptainer --version
[2025-10-12 01:04:06] apptainer version 1.3.2-1.el7
[2025-10-12 01:04:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:04:08] c-115-13.aglt2.org
[2025-10-12 01:04:08] apptainer works
[2025-10-12 01:04:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 01:04:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 01:04:08] Starting ATLAS job with PandaID=6838852494
[2025-10-12 01:04:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:57:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:57:43] 2025-10-12 06:57:00,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:57:43] 2025-10-12 06:57:00,510 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:57:43] 2025-10-12 06:57:00,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:57:43] 2025-10-12 06:57:00,513 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:57:43] 2025-10-12 06:57:00,513 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,514 | INFO     | sum of deviations: 5109877950.999996
[2025-10-12 02:57:43] 2025-10-12 06:57:00,514 | INFO     | mean x: 1760248850.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,514 | INFO     | mean y: 2463503.7117117117
[2025-10-12 02:57:43] 2025-10-12 06:57:00,514 | INFO     | -- intersect: -21209090442.306915
[2025-10-12 02:57:43] 2025-10-12 06:57:00,515 | INFO     | intersect: -21209090442.306915
[2025-10-12 02:57:43] 2025-10-12 06:57:00,515 | INFO     | chi2: 2.148004995306378
[2025-10-12 02:57:43] 2025-10-12 06:57:00,515 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | sum of deviations: 11954616794.499998
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | mean x: 1760248697.5
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | mean y: 2481820.1226415094
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | -- intersect: -56981438621.59382
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | intersect: -56981438621.59382
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | chi2: 1.3832936044618835
[2025-10-12 02:57:43] 2025-10-12 06:57:00,516 | INFO     | current chi2=1.3832936044618835 (change=35.60100616690702 %)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,517 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,517 | INFO     | sum of deviations: 11340296378.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,517 | INFO     | mean x: 1760248545.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,517 | INFO     | mean y: 2479938.792079208
[2025-10-12 02:57:43] 2025-10-12 06:57:00,518 | INFO     | -- intersect: -62485779723.131676
[2025-10-12 02:57:43] 2025-10-12 06:57:00,518 | INFO     | intersect: -62485779723.131676
[2025-10-12 02:57:43] 2025-10-12 06:57:00,518 | INFO     | chi2: 1.3863007759928905
[2025-10-12 02:57:43] 2025-10-12 06:57:00,518 | INFO     | current chi2=1.3863007759928905 (change=-0.21739213723732634 %)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,518 | INFO     | right removable region: 100
[2025-10-12 02:57:43] 2025-10-12 06:57:00,518 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 02:57:43] 2025-10-12 06:57:00,519 | INFO     | sum of deviations: -9663525755.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,519 | INFO     | mean x: 1760249002.5
[2025-10-12 02:57:43] 2025-10-12 06:57:00,519 | INFO     | mean y: 2503694.716981132
[2025-10-12 02:57:43] 2025-10-12 06:57:00,519 | INFO     | -- intersect: 46065517481.75067
[2025-10-12 02:57:43] 2025-10-12 06:57:00,519 | INFO     | intersect: 46065517481.75067
[2025-10-12 02:57:43] 2025-10-12 06:57:00,520 | INFO     | chi2: 0.8477439407660001
[2025-10-12 02:57:43] 2025-10-12 06:57:00,520 | INFO     | current chi2=0.8477439407660001 (change=60.53342787291408 %)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,520 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,520 | INFO     | sum of deviations: -6389338372.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | mean x: 1760249155.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | mean y: 2493607.415841584
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | -- intersect: 35209578176.37467
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | intersect: 35209578176.37467
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | chi2: 0.824194711160827
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | current chi2=0.824194711160827 (change=2.7778705895431877 %)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,521 | INFO     | left removable region: 20
[2025-10-12 02:57:43] 2025-10-12 06:57:00,522 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,522 | INFO     | sum of deviations: 1000076273.0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,522 | INFO     | mean x: 1760249124.5
[2025-10-12 02:57:43] 2025-10-12 06:57:00,522 | INFO     | mean y: 2512257.925
[2025-10-12 02:57:43] 2025-10-12 06:57:00,523 | INFO     | -- intersect: -11087365002.493359
[2025-10-12 02:57:43] 2025-10-12 06:57:00,523 | INFO     | intersect: -11087365002.493359
[2025-10-12 02:57:43] 2025-10-12 06:57:00,523 | INFO     | chi2: 0.000555950955240525
[2025-10-12 02:57:43] 2025-10-12 06:57:00,523 | INFO     | -- intersect: -11087365002.493359
[2025-10-12 02:57:43] 2025-10-12 06:57:00,523 | INFO     | current memory leak: 6.30 B/s (using 80 data points, chi2=0.00)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | could have reported an average CPU frequency of 2085 MHz (7 samples)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | ..............................
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . Timing measurements:
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . get job = 0 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . initial setup = 2 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . payload setup = 8 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . stage-in = 0 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . payload execution = 6718 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,524 | INFO     | . stage-out = 0 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,525 | INFO     | . log creation = 0 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,525 | INFO     | ..............................
[2025-10-12 02:57:43] 2025-10-12 06:57:00,616 | INFO     | 
[2025-10-12 02:57:43] 2025-10-12 06:57:00,617 | INFO     | job summary report
[2025-10-12 02:57:43] 2025-10-12 06:57:00,617 | INFO     | --------------------------------------------------
[2025-10-12 02:57:43] 2025-10-12 06:57:00,617 | INFO     | PanDA job id: 6838852494
[2025-10-12 02:57:43] 2025-10-12 06:57:00,617 | INFO     | task id: 46676269
[2025-10-12 02:57:43] 2025-10-12 06:57:00,617 | INFO     | errors: (none)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:57:43] 2025-10-12 06:57:00,618 | INFO     | pilot state: finished 
[2025-10-12 02:57:43] 2025-10-12 06:57:00,618 | INFO     | transexitcode: 0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,618 | INFO     | exeerrorcode: 0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,618 | INFO     | exeerrordiag: 
[2025-10-12 02:57:43] 2025-10-12 06:57:00,618 | INFO     | exitcode: 0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | exitmsg: OK
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | cpuconsumptiontime: 50520 s
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | nevents: 400
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | neventsw: 0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | pid: 18246
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | pgrp: 18246
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | corecount: 8
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | event service: False
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | sizes: {0: 2348685, 1: 2348884, 6: 2349146, 12: 2349174, 6730: 2376288, 6732: 2385286, 6733: 2385470, 6739: 2385664}
[2025-10-12 02:57:43] 2025-10-12 06:57:00,619 | INFO     | --------------------------------------------------
[2025-10-12 02:57:43] 2025-10-12 06:57:00,620 | INFO     | 
[2025-10-12 02:57:43] 2025-10-12 06:57:00,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 02:57:43] 2025-10-12 06:57:00,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:57:43] 2025-10-12 06:57:00,652 | INFO     | job 6838852494 has completed (purged errors)
[2025-10-12 02:57:43] 2025-10-12 06:57:00,652 | INFO     | overall cleanup function is called
[2025-10-12 02:57:43] 2025-10-12 06:57:01,661 | INFO     | --- collectZombieJob: --- 10, [18246]
[2025-10-12 02:57:43] 2025-10-12 06:57:01,661 | INFO     | zombie collector waiting for pid 18246
[2025-10-12 02:57:43] 2025-10-12 06:57:01,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:57:43] 2025-10-12 06:57:01,661 | INFO     | collected zombie processes
[2025-10-12 02:57:43] 2025-10-12 06:57:01,661 | INFO     | will attempt to kill all subprocesses of pid=18246
[2025-10-12 02:57:43] 2025-10-12 06:57:01,747 | INFO     | process IDs to be killed: [18246] (in reverse order)
[2025-10-12 02:57:43] 2025-10-12 06:57:01,804 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:57:43] 2025-10-12 06:57:01,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:57:43] 2025-10-12 06:57:01,809 | INFO     | did not find any defunct processes belonging to 18246
[2025-10-12 02:57:43] 2025-10-12 06:57:01,811 | INFO     | did not find any defunct processes belonging to 18246
[2025-10-12 02:57:43] 2025-10-12 06:57:01,811 | INFO     | ready for new job
[2025-10-12 02:57:43] 2025-10-12 06:57:01,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:57:43] 2025-10-12 06:57:01,813 | INFO     | ***************************************
[2025-10-12 02:57:43] 2025-10-12 06:57:01,813 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:57:43] 2025-10-12 06:57:01,814 | INFO     | ***************************************
[2025-10-12 02:57:43] 2025-10-12 06:57:01,814 | INFO     | 
[2025-10-12 02:57:43] 2025-10-12 06:57:01,814 | INFO     | architecture information:
[2025-10-12 02:57:43] 2025-10-12 06:57:01,815 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:57:43] 2025-10-12 06:57:01,834 | INFO     | cat /etc/os-release:
[2025-10-12 02:57:43] NAME="CentOS Linux"
[2025-10-12 02:57:43] VERSION="7 (Core)"
[2025-10-12 02:57:43] ID="centos"
[2025-10-12 02:57:43] ID_LIKE="rhel fedora"
[2025-10-12 02:57:43] VERSION_ID="7"
[2025-10-12 02:57:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:57:43] ANSI_COLOR="0;31"
[2025-10-12 02:57:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:57:43] HOME_URL="https://www.centos.org/"
[2025-10-12 02:57:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:57:43] 
[2025-10-12 02:57:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:57:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:57:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:57:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:57:43] 
[2025-10-12 02:57:43] 2025-10-12 06:57:01,834 | INFO     | ***************************************
[2025-10-12 02:57:43] 2025-10-12 06:57:02,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 02:57:43] 2025-10-12 06:57:02,359 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-12 02:57:43] 2025-10-12 06:57:02,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:57:43] 2025-10-12 06:57:02,360 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:57:43] 2025-10-12 06:57:02,360 | INFO     | update_server=False
[2025-10-12 02:57:43] 2025-10-12 06:57:02,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:57:43] 2025-10-12 06:57:02,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:57:43] 2025-10-12 06:57:02,361 | INFO     | aborting loop
[2025-10-12 02:57:43] 2025-10-12 06:57:02,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:57:43] 2025-10-12 06:57:02,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:57:43] 2025-10-12 06:57:02,853 | INFO     | all data control threads have been joined
[2025-10-12 02:57:43] 2025-10-12 06:57:03,365 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,366 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,367 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,760 | INFO     | all payload control threads have been joined
[2025-10-12 02:57:43] 2025-10-12 06:57:03,837 | INFO     | all job control threads have been joined
[2025-10-12 02:57:43] 2025-10-12 06:57:03,859 | INFO     | [data] control thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,874 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,905 | INFO     | [job] validate thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,945 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:03,950 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:04,326 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:04,333 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:04,367 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:04,551 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:04,766 | INFO     | [payload] control thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:04,843 | INFO     | [job] control thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:05,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:57:43] 2025-10-12 06:57:09,679 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:12,604 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:57:43] 2025-10-12 06:57:13,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:57:43] 2025-10-12 06:57:32,550 | INFO     | PID=11866 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 02:57:43] 2025-10-12 06:57:32,550 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:57:43] 2025-10-12 06:57:32,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:57:43] 2025-10-12 06:57:32,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:57:43] 2025-10-12 06:57:35,532 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:57:43] 2025-10-12 06:57:37,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018564749120)>', '<ExcThread(monitor, started 140017661892352)>']
[2025-10-12 02:57:43] 2025-10-12 06:57:38,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:57:43] 2025-10-12 06:57:38,581 | INFO     | [monitor] control thread has ended
[2025-10-12 02:57:43] 2025-10-12 06:57:42,639 | INFO     | all workflow threads have been joined
[2025-10-12 02:57:43] 2025-10-12 06:57:42,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:57:43] 2025-10-12 06:57:42,641 | INFO     | traces error code: 0
[2025-10-12 02:57:43] 2025-10-12 06:57:42,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:57:43] 2025-10-12 06:57:42,768 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:57:43] 2025-10-12 06:57:42,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:57:43] 2025-10-12 06:57:42,777 [wrapper] pilotpid: 11866
[2025-10-12 02:57:43] 2025-10-12 06:57:42,781 [wrapper] Pilot exit status: 0
[2025-10-12 02:57:43] 2025-10-12 06:57:42,801 [wrapper] pandaids: 6838852494
[2025-10-12 02:57:43] 2025-10-12 06:57:42,846 [wrapper] cleanup supervisor_pilot 19359 11867
[2025-10-12 02:57:43] 2025-10-12 06:57:42,851 [wrapper] Test setup, not cleaning
[2025-10-12 02:57:43] 2025-10-12 06:57:42,856 [wrapper] apfmon messages muted
[2025-10-12 02:57:43] 2025-10-12 06:57:42,860 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:57:43] 2025-10-12 06:57:42,864 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:57:43]  *** Error codes and diagnostics ***
[2025-10-12 02:57:43]     "exeErrorCode": 0,
[2025-10-12 02:57:43]     "exeErrorDiag": "",
[2025-10-12 02:57:43]     "pilotErrorCode": 0,
[2025-10-12 02:57:43]     "pilotErrorDiag": "",
[2025-10-12 02:57:43]  *** Listing of results directory ***
[2025-10-12 02:57:43] total 413416
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 16:29 queuedata.json
[2025-10-12 02:57:43] -rwx------ 1 boincer umatlas     36292 Oct 11 16:29 runpilot2-wrapper.sh
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas       100 Oct 12 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:57:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 01:04 run_atlas
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas       105 Oct 12 01:04 job.xml
[2025-10-12 02:57:43] -rw-r--r-- 2 boincer umatlas 222041161 Oct 12 01:04 EVNT.46676267._002583.pool.root.1
[2025-10-12 02:57:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:04 start_atlas.sh
[2025-10-12 02:57:43] drwxrwx--x 2 boincer umatlas      4096 Oct 12 01:04 shared
[2025-10-12 02:57:43] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 01:04 input.tar.gz
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas         0 Oct 12 01:04 boinc_lockfile
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 01:04 pandaJob.out
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas    975512 Oct 12 01:04 agis_schedconf.cvmfs.json
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas   1560580 Oct 12 01:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:57:43] drwx------ 5 boincer umatlas      4096 Oct 12 01:04 pilot3
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 02:45 init_data.xml
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas 194749941 Oct 12 02:56 HITS.46676269._064276.pool.root.1
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas       529 Oct 12 02:56 boinc_task_state.xml
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas      1052 Oct 12 02:56 memory_monitor_summary.json
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas    363762 Oct 12 02:56 log.46676269._064276.job.log.tgz.1
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas        95 Oct 12 02:56 pilot_heartbeat.json
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas      7851 Oct 12 02:57 heartbeat.json
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas        27 Oct 12 02:57 wrapper_checkpoint.txt
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 02:57 boinc_mmap_file
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas      4818 Oct 12 02:57 pilotlog.txt
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas    954575 Oct 12 02:57 log.46676269._064276.job.log.1
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas       357 Oct 12 02:57 output.list
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas       620 Oct 12 02:57 runtime_log
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas   1341440 Oct 12 02:57 result.tar.gz
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 02:57 runtime_log.err
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas       658 Oct 12 02:57 NhrNDmlOvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMWhNDmRJd53m.diag
[2025-10-12 02:57:43] -rw-r--r-- 1 boincer umatlas     20841 Oct 12 02:57 stderr.txt
[2025-10-12 02:57:43] HITS file was successfully produced:
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas 194749941 Oct 12 02:56 shared/HITS.pool.root.1
[2025-10-12 02:57:43]  *** Contents of shared directory: ***
[2025-10-12 02:57:43] total 408920
[2025-10-12 02:57:43] -rw-r--r-- 2 boincer umatlas 222041161 Oct 12 01:04 ATLAS.root_0
[2025-10-12 02:57:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 01:04 start_atlas.sh
[2025-10-12 02:57:43] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 01:04 input.tar.gz
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas 194749941 Oct 12 02:56 HITS.pool.root.1
[2025-10-12 02:57:43] -rw------- 1 boincer umatlas   1341440 Oct 12 02:57 result.tar.gz
02:57:44 (8115): run_atlas exited; CPU time 50487.299454
02:57:44 (8115): called boinc_finish(0)

</stderr_txt>
]]>

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