Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:55:25 (17966): wrapper (7.7.26015): starting
00:55:25 (17966): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:55:25] Arguments: --nthreads 8
[2025-10-12 00:55:25] Threads: 8
[2025-10-12 00:55:25] Checking for CVMFS
[2025-10-12 00:55:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:55:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:55:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:55:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:55:25] 2.11.2.0 3213 627366 248272 151608 0 188 20272730 20275201 917 130560 1 357492801 99.992 26045953 20165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:55:25] CVMFS is ok
[2025-10-12 00:55:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:55:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:55:25] Further information can be found at the LHC@home message board.
[2025-10-12 00:55:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:55:25] Checking for apptainer binary...
[2025-10-12 00:55:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:55:25] Running /usr/bin/apptainer --version
[2025-10-12 00:55:25] apptainer version 1.3.2-1.el7
[2025-10-12 00:55:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:55:26] c-205-38.aglt2.org
[2025-10-12 00:55:26] apptainer works
[2025-10-12 00:55:26] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:55:26] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:55:26] Starting ATLAS job with PandaID=6835979504
[2025-10-12 00:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:51:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:51:46]  status=None
[2025-10-12 01:51:46]  status_code=0
[2025-10-12 01:51:46]  storage_token=
[2025-10-12 01:51:46]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6835979504/log.46676269._004101.job.log.tgz.1
[2025-10-12 01:51:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/6a/log.46676269._004101.job.log.tgz.1
[2025-10-12 01:51:46]  workdir=None
[2025-10-12 01:51:46] ]
[2025-10-12 01:51:46] 2025-10-12 05:50:50,189 | INFO     | transferring file log.46676269._004101.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6835979504/log.46676269._004101.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 01:51:46] 2025-10-12 05:50:50,189 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6835979504/log.46676269._004101.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._004101.job
[2025-10-12 01:51:46] 2025-10-12 05:50:50,206 | INFO     | adding to output.list: log.46676269._004101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/6a/log.46676269._004101.job.log.tg
[2025-10-12 01:51:46] 2025-10-12 05:50:50,207 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 01:51:46] 2025-10-12 05:50:50,207 | INFO     | summary of transferred files:
[2025-10-12 01:51:46] 2025-10-12 05:50:50,207 | INFO     |  -- lfn=log.46676269._004101.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 01:51:46] 2025-10-12 05:50:50,207 | INFO     | stage-out finished correctly
[2025-10-12 01:51:46] 2025-10-12 05:50:51,485 | INFO     | time since job start (3317s) is within the limit (172800.0s)
[2025-10-12 01:51:46] 2025-10-12 05:50:51,670 | WARNING  | process 28035 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 01:51:46] 2025-10-12 05:50:51,670 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6835979504/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:51:46] 2025-10-12 05:50:51,734 | INFO     | number of running child processes to parent process 28035: 1
[2025-10-12 01:51:46] 2025-10-12 05:50:51,734 | INFO     | maximum number of monitored processes: 6
[2025-10-12 01:51:46] 2025-10-12 05:50:53,491 | INFO     | time since job start (3319s) is within the limit (172800.0s)
[2025-10-12 01:51:46] 2025-10-12 05:50:53,705 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 01:51:46] 2025-10-12 05:50:54,241 | INFO     | monitor loop #255: job 0:6835979504 is in state 'finished'
[2025-10-12 01:51:46] 2025-10-12 05:50:54,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:51:46] 2025-10-12 05:50:55,497 | INFO     | time since job start (3321s) is within the limit (172800.0s)
[2025-10-12 01:51:46] 2025-10-12 05:50:56,258 | INFO     | job 6835979504 has state=finished
[2025-10-12 01:51:46] 2025-10-12 05:50:56,258 | INFO     | preparing for final server update for job 6835979504 in state='finished'
[2025-10-12 01:51:46] 2025-10-12 05:50:56,259 | INFO     | this job has now completed (state=finished)
[2025-10-12 01:51:46] 2025-10-12 05:50:56,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 01:51:46] 2025-10-12 05:50:56,259 | INFO     | log transfer has been attempted: DONE
[2025-10-12 01:51:46] 2025-10-12 05:50:56,259 | INFO     | job 6835979504 has finished - writing final server update
[2025-10-12 01:51:46] 2025-10-12 05:50:56,259 | INFO     | total number of processed events: 400 (read)
[2025-10-12 01:51:46] 2025-10-12 05:50:56,260 | INFO     | executing command: lscpu
[2025-10-12 01:51:46] 2025-10-12 05:50:56,283 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 01:51:46] 2025-10-12 05:50:56,744 | INFO     | monitor loop #256: job 0:6835979504 is in state 'finished'
[2025-10-12 01:51:46] 2025-10-12 05:50:56,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:51:46] 2025-10-12 05:50:57,502 | INFO     | time since job start (3323s) is within the limit (172800.0s)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,623 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:51:46] 2025-10-12 05:50:58,627 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2686.462
[2025-10-12 01:51:46] 2025-10-12 05:50:58,631 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6835979504/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,632 | INFO     | extracted standard info from prmon json
[2025-10-12 01:51:46] 2025-10-12 05:50:58,632 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:51:46] 2025-10-12 05:50:58,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:51:46] 2025-10-12 05:50:58,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:51:46] 2025-10-12 05:50:58,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:51:46] 2025-10-12 05:50:58,634 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:51:46] 2025-10-12 05:50:58,635 | INFO     | sum of square deviations: 32179208.0
[2025-10-12 01:51:46] 2025-10-12 05:50:58,635 | INFO     | sum of deviations: -1882128891.9999998
[2025-10-12 01:51:46] 2025-10-12 05:50:58,635 | INFO     | mean x: 1760246663.0
[2025-10-12 01:51:46] 2025-10-12 05:50:58,635 | INFO     | mean y: 2555002.14893617
[2025-10-12 01:51:46] 2025-10-12 05:50:58,635 | INFO     | -- intersect: 102957578055.50958
[2025-10-12 01:51:46] 2025-10-12 05:50:58,635 | INFO     | intersect: 102957578055.50958
[2025-10-12 01:51:46] 2025-10-12 05:50:58,636 | INFO     | chi2: 0.01150955959911033
[2025-10-12 01:51:46] 2025-10-12 05:50:58,636 | INFO     | -- intersect: 102957578055.50958
[2025-10-12 01:51:46] 2025-10-12 05:50:58,636 | INFO     | current memory leak: -58.49 B/s (using 47 data points, chi2=0.01)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,636 | INFO     | could have reported an average CPU frequency of 2872 MHz (5 samples)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,636 | INFO     | ..............................
[2025-10-12 01:51:46] 2025-10-12 05:50:58,636 | INFO     | . Timing measurements:
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . get job = 0 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . initial setup = 2 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . payload setup = 3 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . stage-in = 0 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . payload execution = 3294 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . stage-out = 0 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | . log creation = 0 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,637 | INFO     | ..............................
[2025-10-12 01:51:46] 2025-10-12 05:50:58,716 | INFO     | 
[2025-10-12 01:51:46] 2025-10-12 05:50:58,716 | INFO     | job summary report
[2025-10-12 01:51:46] 2025-10-12 05:50:58,716 | INFO     | --------------------------------------------------
[2025-10-12 01:51:46] 2025-10-12 05:50:58,716 | INFO     | PanDA job id: 6835979504
[2025-10-12 01:51:46] 2025-10-12 05:50:58,716 | INFO     | task id: 46676269
[2025-10-12 01:51:46] 2025-10-12 05:50:58,716 | INFO     | errors: (none)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | pilot state: finished 
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | transexitcode: 0
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | exeerrorcode: 0
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | exeerrordiag: 
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | exitcode: 0
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | exitmsg: OK
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | cpuconsumptiontime: 24455 s
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | nevents: 400
[2025-10-12 01:51:46] 2025-10-12 05:50:58,717 | INFO     | neventsw: 0
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | pid: 28035
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | pgrp: 28035
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | corecount: 8
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | event service: False
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | sizes: {0: 2348737, 1: 2348879, 3: 2349141, 11: 2349169, 3301: 2374836, 3302: 2383834, 3305: 2384018, 3310: 2384244}
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | --------------------------------------------------
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | 
[2025-10-12 01:51:46] 2025-10-12 05:50:58,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 01:51:46] 2025-10-12 05:50:58,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | job 6835979504 has completed (purged errors)
[2025-10-12 01:51:46] 2025-10-12 05:50:58,741 | INFO     | overall cleanup function is called
[2025-10-12 01:51:46] 2025-10-12 05:50:59,749 | INFO     | --- collectZombieJob: --- 10, [28035]
[2025-10-12 01:51:46] 2025-10-12 05:50:59,750 | INFO     | zombie collector waiting for pid 28035
[2025-10-12 01:51:46] 2025-10-12 05:50:59,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:51:46] 2025-10-12 05:50:59,750 | INFO     | collected zombie processes
[2025-10-12 01:51:46] 2025-10-12 05:50:59,750 | INFO     | will attempt to kill all subprocesses of pid=28035
[2025-10-12 01:51:46] 2025-10-12 05:50:59,865 | INFO     | process IDs to be killed: [28035] (in reverse order)
[2025-10-12 01:51:46] 2025-10-12 05:50:59,917 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:51:46] 2025-10-12 05:50:59,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:51:46] 2025-10-12 05:50:59,920 | INFO     | did not find any defunct processes belonging to 28035
[2025-10-12 01:51:46] 2025-10-12 05:50:59,922 | INFO     | did not find any defunct processes belonging to 28035
[2025-10-12 01:51:46] 2025-10-12 05:50:59,922 | INFO     | ready for new job
[2025-10-12 01:51:46] 2025-10-12 05:50:59,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:51:46] 2025-10-12 05:50:59,924 | INFO     | ***************************************
[2025-10-12 01:51:46] 2025-10-12 05:50:59,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:51:46] 2025-10-12 05:50:59,924 | INFO     | ***************************************
[2025-10-12 01:51:46] 2025-10-12 05:50:59,924 | INFO     | 
[2025-10-12 01:51:46] 2025-10-12 05:50:59,925 | INFO     | architecture information:
[2025-10-12 01:51:46] 2025-10-12 05:50:59,928 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:51:46] 2025-10-12 05:50:59,949 | INFO     | cat /etc/os-release:
[2025-10-12 01:51:46] NAME="CentOS Linux"
[2025-10-12 01:51:46] VERSION="7 (Core)"
[2025-10-12 01:51:46] ID="centos"
[2025-10-12 01:51:46] ID_LIKE="rhel fedora"
[2025-10-12 01:51:46] VERSION_ID="7"
[2025-10-12 01:51:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:51:46] ANSI_COLOR="0;31"
[2025-10-12 01:51:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:51:46] HOME_URL="https://www.centos.org/"
[2025-10-12 01:51:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:51:46] 
[2025-10-12 01:51:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:51:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:51:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:51:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:51:46] 
[2025-10-12 01:51:46] 2025-10-12 05:50:59,949 | INFO     | ***************************************
[2025-10-12 01:51:46] 2025-10-12 05:51:00,452 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 01:51:46] 2025-10-12 05:51:00,471 | INFO     | sufficient remaining disk space (32719765504 B)
[2025-10-12 01:51:46] 2025-10-12 05:51:00,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:51:46] 2025-10-12 05:51:00,472 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:51:46] 2025-10-12 05:51:00,472 | INFO     | update_server=False
[2025-10-12 01:51:46] 2025-10-12 05:51:00,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:51:46] 2025-10-12 05:51:00,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:51:46] 2025-10-12 05:51:00,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:51:46] 2025-10-12 05:51:00,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:51:46] 2025-10-12 05:51:00,473 | INFO     | aborting loop
[2025-10-12 01:51:46] 2025-10-12 05:51:00,695 | INFO     | all payload control threads have been joined
[2025-10-12 01:51:46] 2025-10-12 05:51:00,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:51:46] 2025-10-12 05:51:00,846 | INFO     | all data control threads have been joined
[2025-10-12 01:51:46] 2025-10-12 05:51:01,060 | INFO     | all job control threads have been joined
[2025-10-12 01:51:46] 2025-10-12 05:51:01,474 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:01,476 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:01,477 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:01,673 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:01,696 | INFO     | [payload] control thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:01,851 | INFO     | [data] control thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,065 | INFO     | [job] control thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,417 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,486 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,524 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,528 | INFO     | [job] validate thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,760 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,772 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:02,880 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:04,478 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:51:46] 2025-10-12 05:51:30,653 | INFO     | PID=21629 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 01:51:46] 2025-10-12 05:51:30,653 | INFO     | .. there are 2 such processes running
[2025-10-12 01:51:46] 2025-10-12 05:51:30,654 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:51:46] 2025-10-12 05:51:30,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:51:46] 2025-10-12 05:51:30,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:51:46] 2025-10-12 05:51:39,357 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:51:46] 2025-10-12 05:51:41,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630914373440)>', '<ExcThread(monitor, started 140630617470720)>']
[2025-10-12 01:51:46] 2025-10-12 05:51:41,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:51:46] 2025-10-12 05:51:41,701 | INFO     | [monitor] control thread has ended
[2025-10-12 01:51:46] 2025-10-12 05:51:46,251 | INFO     | all workflow threads have been joined
[2025-10-12 01:51:46] 2025-10-12 05:51:46,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:51:46] 2025-10-12 05:51:46,252 | INFO     | traces error code: 0
[2025-10-12 01:51:46] 2025-10-12 05:51:46,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:51:46] 2025-10-12 05:51:46,341 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:51:46] 2025-10-12 05:51:46,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:51:46] 2025-10-12 05:51:46,348 [wrapper] pilotpid: 21629
[2025-10-12 01:51:46] 2025-10-12 05:51:46,351 [wrapper] Pilot exit status: 0
[2025-10-12 01:51:46] 2025-10-12 05:51:46,362 [wrapper] pandaids: 6835979504
[2025-10-12 01:51:46] 2025-10-12 05:51:46,397 [wrapper] cleanup supervisor_pilot  2762 21630
[2025-10-12 01:51:46] 2025-10-12 05:51:46,400 [wrapper] Test setup, not cleaning
[2025-10-12 01:51:46] 2025-10-12 05:51:46,403 [wrapper] apfmon messages muted
[2025-10-12 01:51:46] 2025-10-12 05:51:46,406 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:51:46] 2025-10-12 05:51:46,408 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:51:46]  *** Error codes and diagnostics ***
[2025-10-12 01:51:46]     "exeErrorCode": 0,
[2025-10-12 01:51:46]     "exeErrorDiag": "",
[2025-10-12 01:51:46]     "pilotErrorCode": 0,
[2025-10-12 01:51:46]     "pilotErrorDiag": "",
[2025-10-12 01:51:46]  *** Listing of results directory ***
[2025-10-12 01:51:46] total 411368
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-12 01:51:46] -rwx------ 1 boincer umatlas     36292 Oct  8 05:54 runpilot2-wrapper.sh
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 05:55 queuedata.json
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:51:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 00:55 run_atlas
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 00:55 job.xml
[2025-10-12 01:51:46] -rw-r--r-- 2 boincer umatlas 220436444 Oct 12 00:55 EVNT.46676267._000165.pool.root.1
[2025-10-12 01:51:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:55 start_atlas.sh
[2025-10-12 01:51:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 00:55 shared
[2025-10-12 01:51:46] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 00:55 input.tar.gz
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 00:55 boinc_lockfile
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 00:55 pandaJob.out
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas    975512 Oct 12 00:55 agis_schedconf.cvmfs.json
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas   1560580 Oct 12 00:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:51:46] drwx------ 5 boincer umatlas      4096 Oct 12 00:55 pilot3
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas      6134 Oct 12 01:46 init_data.xml
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas       529 Oct 12 01:50 boinc_task_state.xml
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas 195228933 Oct 12 01:50 HITS.46676269._004101.pool.root.1
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas      1045 Oct 12 01:50 memory_monitor_summary.json
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas    320257 Oct 12 01:50 log.46676269._004101.job.log.tgz.1
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas      7833 Oct 12 01:50 heartbeat.json
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas        95 Oct 12 01:51 pilot_heartbeat.json
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 01:51 boinc_mmap_file
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 01:51 wrapper_checkpoint.txt
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas      4821 Oct 12 01:51 pilotlog.txt
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas    512155 Oct 12 01:51 log.46676269._004101.job.log.1
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas       357 Oct 12 01:51 output.list
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 01:51 runtime_log
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas    849920 Oct 12 01:51 result.tar.gz
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 01:51 runtime_log.err
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas       655 Oct 12 01:51 PD2KDm72fQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaNMMDm5BL9Un.diag
[2025-10-12 01:51:46] -rw-r--r-- 1 boincer umatlas     22004 Oct 12 01:51 stderr.txt
[2025-10-12 01:51:46] HITS file was successfully produced:
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas 195228933 Oct 12 01:50 shared/HITS.pool.root.1
[2025-10-12 01:51:46]  *** Contents of shared directory: ***
[2025-10-12 01:51:46] total 407344
[2025-10-12 01:51:46] -rw-r--r-- 2 boincer umatlas 220436444 Oct 12 00:55 ATLAS.root_0
[2025-10-12 01:51:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:55 start_atlas.sh
[2025-10-12 01:51:46] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 00:55 input.tar.gz
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas 195228933 Oct 12 01:50 HITS.pool.root.1
[2025-10-12 01:51:46] -rw------- 1 boincer umatlas    849920 Oct 12 01:51 result.tar.gz
01:51:47 (17966): run_atlas exited; CPU time 24423.329327
01:51:47 (17966): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN