Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:50 (365774): wrapper (7.7.26015): starting
22:04:50 (365774): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 22:04:50] Arguments: --nthreads 12
[2025-10-11 22:04:50] Threads: 12
[2025-10-11 22:04:50] Checking for CVMFS
[2025-10-11 22:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:04:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:04:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:04:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:04:51] 2.11.5.0 2130 29475 223252 151608 2 712 26451397 45568000 19532 130560 0 319513667 99.880 118228791 26192 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 22:04:51] CVMFS is ok
[2025-10-11 22:04:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:04:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:04:51] Further information can be found at the LHC@home message board.
[2025-10-11 22:04:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:04:51] Checking for apptainer binary...
[2025-10-11 22:04:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:04:51] Running /usr/bin/apptainer --version
[2025-10-11 22:04:51] apptainer version 1.4.1-1.el9
[2025-10-11 22:04:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:04:51] wns0025.triumf.lcg
[2025-10-11 22:04:51] apptainer works
[2025-10-11 22:04:51] Set ATHENA_PROC_NUMBER=12
[2025-10-11 22:04:51] Set ATHENA_CORE_NUMBER=12
[2025-10-11 22:04:51] Starting ATLAS job with PandaID=6839162313
[2025-10-11 22:04:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:09:21]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | WARNING  | wrong length of table data, x=[1760245562.0], y=[806.0] (must be same and length>=4)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | could have reported an average CPU frequency of 2682 MHz (4 samples)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | ..............................
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | . Timing measurements:
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | . get job = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . initial setup = 3 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . payload setup = 14 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . stage-in = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . payload execution = 39 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | . stage-out = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | . log creation = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | ..............................
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162313/pilotlog.txt
[2025-10-11 22:09:21] 2025-10-12 05:08:43,970 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 22:09:21] - Log from pilotlog.txt -
[2025-10-11 22:09:21] 2025-10-12 05:08:43,941 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162313/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | INFO     | extracted standard info from prmon json
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | WARNING  | wrong length of table data, x=[1760245562.0], y=[806.0] (must be same and length>=4)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | could have reported an average CPU frequency of 2682 MHz (4 samples)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | ..............................
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | . Timing measurements:
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | . get job = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . initial setup = 3 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . payload setup = 14 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . stage-in = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . payload execution = 39 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | . stage-out = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | . log creation = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | ..............................
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162313/pilotlog.txt
[2025-10-11 22:09:21] 2025-10-12 05:08:43,971 | WARNING  | 
[2025-10-11 22:09:21] [begin log extracts]
[2025-10-11 22:09:21] - Log from pilotlog.txt -
[2025-10-11 22:09:21] 2025-10-12 05:08:43,941 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162313/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | INFO     | extracted standard info from prmon json
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:09:21] 2025-10-12 05:08:43,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | WARNING  | wrong length of table data, x=[1760245562.0], y=[806.0] (must be same and length>=4)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | could have reported an average CPU frequency of 2682 MHz (4 samples)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | ..............................
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | . Timing measurements:
[2025-10-11 22:09:21] 2025-10-12 05:08:43,943 | INFO     | . get job = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . initial setup = 3 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . payload setup = 14 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . stage-in = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,945 | INFO     | . payload execution = 39 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | . stage-out = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | . log creation = 0 s
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | ..............................
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 22:09:21] 2025-10-12 05:08:43,946 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162313/pilotlog.txt
[2025-10-11 22:09:21] [end log extracts]
[2025-10-11 22:09:21] 2025-10-12 05:08:43,971 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 22:09:21] 2025-10-12 05:08:43,972 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 22:09:21] 2025-10-12 05:08:44,037 | INFO     | 
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | job summary report
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | --------------------------------------------------
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | PanDA job id: 6839162313
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | task id: 46676269
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 22:06:25,855 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | pilot state: failed 
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | transexitcode: 65
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | exeerrorcode: 65
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | exitcode: 65
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | nevents: 0
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | neventsw: 0
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | pid: 376176
[2025-10-11 22:09:21] 2025-10-12 05:08:44,038 | INFO     | pgrp: 376176
[2025-10-11 22:09:21] 2025-10-12 05:08:44,039 | INFO     | corecount: 12
[2025-10-11 22:09:21] 2025-10-12 05:08:44,039 | INFO     | event service: False
[2025-10-11 22:09:21] 2025-10-12 05:08:44,039 | INFO     | sizes: {0: 2348854, 10: 2349116, 11: 2349144, 57: 2376869, 61: 2376869, 187: 2377035}
[2025-10-11 22:09:21] 2025-10-12 05:08:44,039 | INFO     | --------------------------------------------------
[2025-10-11 22:09:21] 2025-10-12 05:08:44,039 | INFO     | 
[2025-10-11 22:09:21] 2025-10-12 05:08:44,039 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 22:09:21] 2025-10-12 05:08:44,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:09:21] 2025-10-12 05:08:44,068 | INFO     | job 6839162313 has completed (purged errors)
[2025-10-11 22:09:21] 2025-10-12 05:08:44,068 | INFO     | overall cleanup function is called
[2025-10-11 22:09:21] 2025-10-12 05:08:45,077 | INFO     | --- collectZombieJob: --- 10, [376176]
[2025-10-11 22:09:21] 2025-10-12 05:08:45,078 | INFO     | zombie collector waiting for pid 376176
[2025-10-11 22:09:21] 2025-10-12 05:08:45,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:09:21] 2025-10-12 05:08:45,078 | INFO     | collected zombie processes
[2025-10-11 22:09:21] 2025-10-12 05:08:45,078 | INFO     | will attempt to kill all subprocesses of pid=376176
[2025-10-11 22:09:21] 2025-10-12 05:08:45,394 | INFO     | process IDs to be killed: [376176] (in reverse order)
[2025-10-11 22:09:21] 2025-10-12 05:08:45,523 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:09:21] 2025-10-12 05:08:45,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:09:21] 2025-10-12 05:08:45,543 | INFO     | did not find any defunct processes belonging to 376176
[2025-10-11 22:09:21] 2025-10-12 05:08:45,555 | INFO     | did not find any defunct processes belonging to 376176
[2025-10-11 22:09:21] 2025-10-12 05:08:45,555 | INFO     | ready for new job
[2025-10-11 22:09:21] 2025-10-12 05:08:45,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:09:21] 2025-10-12 05:08:45,557 | INFO     | ***************************************
[2025-10-11 22:09:21] 2025-10-12 05:08:45,557 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:09:21] 2025-10-12 05:08:45,557 | INFO     | ***************************************
[2025-10-11 22:09:21] 2025-10-12 05:08:45,557 | INFO     | 
[2025-10-11 22:09:21] 2025-10-12 05:08:45,559 | INFO     | architecture information:
[2025-10-11 22:09:21] 2025-10-12 05:08:45,559 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:09:21] 2025-10-12 05:08:45,578 | INFO     | cat /etc/os-release:
[2025-10-11 22:09:21] NAME="CentOS Linux"
[2025-10-11 22:09:21] VERSION="7 (Core)"
[2025-10-11 22:09:21] ID="centos"
[2025-10-11 22:09:21] ID_LIKE="rhel fedora"
[2025-10-11 22:09:21] VERSION_ID="7"
[2025-10-11 22:09:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:09:21] ANSI_COLOR="0;31"
[2025-10-11 22:09:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:09:21] HOME_URL="https://www.centos.org/"
[2025-10-11 22:09:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:09:21] 
[2025-10-11 22:09:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:09:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:09:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:09:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:09:21] 
[2025-10-11 22:09:21] 2025-10-12 05:08:45,579 | INFO     | ***************************************
[2025-10-11 22:09:21] 2025-10-12 05:08:46,083 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 22:09:21] 2025-10-12 05:08:46,127 | INFO     | sufficient remaining disk space (1804311986176 B)
[2025-10-11 22:09:21] 2025-10-12 05:08:46,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:09:21] 2025-10-12 05:08:46,127 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:09:21] 2025-10-12 05:08:46,127 | INFO     | update_server=False
[2025-10-11 22:09:21] 2025-10-12 05:08:46,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:09:21] 2025-10-12 05:08:46,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:09:21] 2025-10-12 05:08:46,163 | INFO     | all job control threads have been joined
[2025-10-11 22:09:21] 2025-10-12 05:08:46,414 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 22:09:21] 2025-10-12 05:08:46,415 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 22:09:21] 2025-10-12 05:08:46,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:09:21] 2025-10-12 05:08:46,415 | INFO     | will abort loop
[2025-10-11 22:09:21] 2025-10-12 05:08:46,481 | INFO     | all data control threads have been joined
[2025-10-11 22:09:21] 2025-10-12 05:08:46,882 | INFO     | all payload control threads have been joined
[2025-10-11 22:09:21] 2025-10-12 05:08:47,133 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,168 | INFO     | [job] control thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,234 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,419 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,488 | INFO     | [data] control thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:09:21] 2025-10-12 05:08:47,825 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,889 | INFO     | [payload] control thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:47,897 | INFO     | [job] validate thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:48,067 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:48,149 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:48,222 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:48,245 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:48,618 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:49,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:09:21] 2025-10-12 05:08:49,612 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:50,053 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:08:50,137 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:09:21] 2025-10-12 05:09:14,340 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:09:21] 2025-10-12 05:09:15,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291391166272)>', '<ExcThread(monitor, started 140290325206784)>']
[2025-10-11 22:09:21] 2025-10-12 05:09:16,365 | INFO     | PID=369481 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 22:09:21] 2025-10-12 05:09:16,366 | INFO     | .. there are 42 such processes running
[2025-10-11 22:09:21] 2025-10-12 05:09:16,368 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:09:21] 2025-10-12 05:09:16,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:09:21] 2025-10-12 05:09:16,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:09:21] 2025-10-12 05:09:16,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:09:21] 2025-10-12 05:09:16,369 | INFO     | [monitor] control thread has ended
[2025-10-11 22:09:21] 2025-10-12 05:09:20,890 | INFO     | all workflow threads have been joined
[2025-10-11 22:09:21] 2025-10-12 05:09:20,891 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:09:21] 2025-10-12 05:09:20,891 | INFO     | traces error code: 0
[2025-10-11 22:09:21] 2025-10-12 05:09:20,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:09:21] 2025-10-12 05:09:21,007 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:09:21] 2025-10-12 05:09:21,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:09:21] 2025-10-12 05:09:21,010 [wrapper] pilotpid: 369481
[2025-10-11 22:09:21] 2025-10-12 05:09:21,016 [wrapper] Pilot exit status: 0
[2025-10-11 22:09:21] 2025-10-12 05:09:21,035 [wrapper] pandaids: 6839162313
[2025-10-11 22:09:21] 2025-10-12 05:09:21,108 [wrapper] cleanup supervisor_pilot  369487 369482
[2025-10-11 22:09:21] 2025-10-12 05:09:21,110 [wrapper] Test setup, not cleaning
[2025-10-11 22:09:21] 2025-10-12 05:09:21,129 [wrapper] apfmon messages muted
[2025-10-11 22:09:21] 2025-10-12 05:09:21,136 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:09:21] 2025-10-12 05:09:21,149 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:09:21]  *** Error codes and diagnostics ***
[2025-10-11 22:09:21]     "exeErrorCode": 65,
[2025-10-11 22:09:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 22:09:21]     "pilotErrorCode": 1305,
[2025-10-11 22:09:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 22:09:21]  *** Listing of results directory ***
[2025-10-11 22:09:21] total 221160
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:09 pilot3.tar.gz
[2025-10-11 22:09:21] -rwx------. 1 boinc boinc     36292 Oct 11 16:17 runpilot2-wrapper.sh
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc      5112 Oct 11 16:17 queuedata.json
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc       100 Oct 11 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:09:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 22:04 run_atlas
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc       105 Oct 11 22:04 job.xml
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc      6593 Oct 11 22:04 init_data.xml
[2025-10-11 22:09:21] -rw-r--r--. 2 boinc boinc 222337696 Oct 11 22:04 EVNT.46676267._002706.pool.root.1
[2025-10-11 22:09:21] -rw-r--r--. 2 boinc boinc     15120 Oct 11 22:04 start_atlas.sh
[2025-10-11 22:09:21] drwxrwx--x. 2 boinc boinc      4096 Oct 11 22:04 shared
[2025-10-11 22:09:21] -rw-r--r--. 2 boinc boinc    569681 Oct 11 22:04 input.tar.gz
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc         0 Oct 11 22:04 boinc_lockfile
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc      2550 Oct 11 22:04 pandaJob.out
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc    975512 Oct 11 22:05 agis_schedconf.cvmfs.json
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc   1560580 Oct 11 22:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:09:21] drwx------. 5 boinc boinc      4096 Oct 11 22:05 pilot3
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc       522 Oct 11 22:06 boinc_task_state.xml
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc       987 Oct 11 22:06 memory_monitor_summary.json
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc     21828 Oct 11 22:06 log.46676269._066920.job.log.tgz.1
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc      8413 Oct 11 22:08 heartbeat.json
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc        95 Oct 11 22:09 pilot_heartbeat.json
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc      8192 Oct 11 22:09 boinc_mmap_file
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc        22 Oct 11 22:09 wrapper_checkpoint.txt
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc      5008 Oct 11 22:09 pilotlog.txt
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc     89521 Oct 11 22:09 log.46676269._066920.job.log.1
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc       188 Oct 11 22:09 output.list
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc       620 Oct 11 22:09 runtime_log
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc    133120 Oct 11 22:09 result.tar.gz
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc      8528 Oct 11 22:09 runtime_log.err
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc       646 Oct 11 22:09 isPKDmQ1xR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmemSMDm8jjpXm.diag
[2025-10-11 22:09:21] -rw-r--r--. 1 boinc boinc     21780 Oct 11 22:09 stderr.txt
[2025-10-11 22:09:21] No HITS result produced
[2025-10-11 22:09:21]  *** Contents of shared directory: ***
[2025-10-11 22:09:21] total 217840
[2025-10-11 22:09:21] -rw-r--r--. 2 boinc boinc 222337696 Oct 11 22:04 ATLAS.root_0
[2025-10-11 22:09:21] -rw-r--r--. 2 boinc boinc     15120 Oct 11 22:04 start_atlas.sh
[2025-10-11 22:09:21] -rw-r--r--. 2 boinc boinc    569681 Oct 11 22:04 input.tar.gz
[2025-10-11 22:09:21] -rw-------. 1 boinc boinc    133120 Oct 11 22:09 result.tar.gz
22:09:23 (365774): run_atlas exited; CPU time 25.661963
22:09:23 (365774): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN