Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:50:28 (3010762): wrapper (7.7.26015): starting
00:50:28 (3010762): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:50:28] Arguments: --nthreads 8
[2025-10-12 00:50:28] Threads: 8
[2025-10-12 00:50:28] Checking for CVMFS
[2025-10-12 00:50:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:50:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:50:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:50:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:50:29] 2.13.2.0 4298 23892 222528 151608 2 196 23579924 32935937 4331 16776704 0 68813887 99.720 51565234 29846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:50:29] CVMFS is ok
[2025-10-12 00:50:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:50:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:50:29] Further information can be found at the LHC@home message board.
[2025-10-12 00:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:50:29] Checking for apptainer binary...
[2025-10-12 00:50:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:50:29] Running /usr/bin/apptainer --version
[2025-10-12 00:50:29] apptainer version 1.4.3-1.el9
[2025-10-12 00:50:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:50:29] c-8-24.aglt2.org
[2025-10-12 00:50:29] apptainer works
[2025-10-12 00:50:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:50:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:50:29] Starting ATLAS job with PandaID=6839162648
[2025-10-12 00:50:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:29:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:29:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 02:29:59]  replicas=None
[2025-10-12 02:29:59]  scope=mc23_13p6TeV
[2025-10-12 02:29:59]  status=None
[2025-10-12 02:29:59]  status_code=0
[2025-10-12 02:29:59]  storage_token=
[2025-10-12 02:29:59]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6839162648/log.46676269._067071.job.log.tgz.1
[2025-10-12 02:29:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/cc/log.46676269._067071.job.log.tgz.1
[2025-10-12 02:29:59]  workdir=None
[2025-10-12 02:29:59] ]
[2025-10-12 02:29:59] 2025-10-12 06:29:22,685 | INFO     | transferring file log.46676269._067071.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6839162648/log.46676269._067071.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 02:29:59] 2025-10-12 06:29:22,685 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6839162648/log.46676269._067071.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._067071.job
[2025-10-12 02:29:59] 2025-10-12 06:29:22,701 | INFO     | adding to output.list: log.46676269._067071.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/cc/log.46676269._067071.job.log.tg
[2025-10-12 02:29:59] 2025-10-12 06:29:22,702 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 02:29:59] 2025-10-12 06:29:22,703 | INFO     | summary of transferred files:
[2025-10-12 02:29:59] 2025-10-12 06:29:22,703 | INFO     |  -- lfn=log.46676269._067071.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 02:29:59] 2025-10-12 06:29:22,703 | INFO     | stage-out finished correctly
[2025-10-12 02:29:59] 2025-10-12 06:29:23,594 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 02:29:59] 2025-10-12 06:29:23,646 | INFO     | job 6839162648 has state=finished
[2025-10-12 02:29:59] 2025-10-12 06:29:23,646 | INFO     | preparing for final server update for job 6839162648 in state='finished'
[2025-10-12 02:29:59] 2025-10-12 06:29:23,647 | INFO     | this job has now completed (state=finished)
[2025-10-12 02:29:59] 2025-10-12 06:29:23,647 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 02:29:59] 2025-10-12 06:29:23,647 | INFO     | log transfer has been attempted: DONE
[2025-10-12 02:29:59] 2025-10-12 06:29:23,647 | INFO     | job 6839162648 has finished - writing final server update
[2025-10-12 02:29:59] 2025-10-12 06:29:23,648 | INFO     | total number of processed events: 400 (read)
[2025-10-12 02:29:59] 2025-10-12 06:29:23,648 | INFO     | executing command: lscpu
[2025-10-12 02:29:59] 2025-10-12 06:29:23,685 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 02:29:59] 2025-10-12 06:29:24,192 | INFO     | monitor loop #439: job 0:6839162648 is in state 'finished'
[2025-10-12 02:29:59] 2025-10-12 06:29:24,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:29:59] 2025-10-12 06:29:24,245 | INFO     | time since job start (5925s) is within the limit (172800.0s)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,252 | INFO     | time since job start (5927s) is within the limit (172800.0s)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,696 | INFO     | monitor loop #440: job 0:6839162648 is in state 'finished'
[2025-10-12 02:29:59] 2025-10-12 06:29:26,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,793 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 02:29:59] 2025-10-12 06:29:26,799 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2660.153649999999
[2025-10-12 02:29:59] 2025-10-12 06:29:26,806 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6839162648/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,807 | INFO     | extracted standard info from prmon json
[2025-10-12 02:29:59] 2025-10-12 06:29:26,807 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 02:29:59] 2025-10-12 06:29:26,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:29:59] 2025-10-12 06:29:26,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:29:59] 2025-10-12 06:29:26,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:29:59] 2025-10-12 06:29:26,810 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:29:59] 2025-10-12 06:29:26,810 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 02:29:59] 2025-10-12 06:29:26,811 | INFO     | sum of deviations: -4831679185.5
[2025-10-12 02:29:59] 2025-10-12 06:29:26,811 | INFO     | mean x: 1760247683.5
[2025-10-12 02:29:59] 2025-10-12 06:29:26,811 | INFO     | mean y: 2209930.966666667
[2025-10-12 02:29:59] 2025-10-12 06:29:26,811 | INFO     | -- intersect: 37630938070.21012
[2025-10-12 02:29:59] 2025-10-12 06:29:26,811 | INFO     | intersect: 37630938070.21012
[2025-10-12 02:29:59] 2025-10-12 06:29:26,812 | INFO     | chi2: 0.04283519028623882
[2025-10-12 02:29:59] 2025-10-12 06:29:26,812 | INFO     | -- intersect: 37630938070.21012
[2025-10-12 02:29:59] 2025-10-12 06:29:26,812 | INFO     | current memory leak: -21.38 B/s (using 90 data points, chi2=0.04)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,812 | INFO     | could have reported an average CPU frequency of 2674 MHz (7 samples)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | ..............................
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . Timing measurements:
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . get job = 0 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . initial setup = 2 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . payload setup = 5 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . stage-in = 0 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . payload execution = 5896 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . stage-out = 0 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,813 | INFO     | . log creation = 0 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,814 | INFO     | ..............................
[2025-10-12 02:29:59] 2025-10-12 06:29:26,918 | INFO     | 
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | job summary report
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | --------------------------------------------------
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | PanDA job id: 6839162648
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | task id: 46676269
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | errors: (none)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:29:59] 2025-10-12 06:29:26,919 | INFO     | pilot state: finished 
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | transexitcode: 0
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | exeerrorcode: 0
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | exeerrordiag: 
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | exitcode: 0
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | exitmsg: OK
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | cpuconsumptiontime: 43423 s
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | nevents: 400
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | neventsw: 0
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | pid: 3020747
[2025-10-12 02:29:59] 2025-10-12 06:29:26,920 | INFO     | pgrp: 3020747
[2025-10-12 02:29:59] 2025-10-12 06:29:26,921 | INFO     | corecount: 8
[2025-10-12 02:29:59] 2025-10-12 06:29:26,921 | INFO     | event service: False
[2025-10-12 02:29:59] 2025-10-12 06:29:26,921 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 5905: 2375961, 5908: 2385143, 5912: 2385281}
[2025-10-12 02:29:59] 2025-10-12 06:29:26,921 | INFO     | --------------------------------------------------
[2025-10-12 02:29:59] 2025-10-12 06:29:26,921 | INFO     | 
[2025-10-12 02:29:59] 2025-10-12 06:29:26,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 02:29:59] 2025-10-12 06:29:26,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,940 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:29:59] 2025-10-12 06:29:26,940 | INFO     | job 6839162648 has completed (purged errors)
[2025-10-12 02:29:59] 2025-10-12 06:29:26,940 | INFO     | overall cleanup function is called
[2025-10-12 02:29:59] 2025-10-12 06:29:27,948 | INFO     | --- collectZombieJob: --- 10, [3020747]
[2025-10-12 02:29:59] 2025-10-12 06:29:27,948 | INFO     | zombie collector waiting for pid 3020747
[2025-10-12 02:29:59] 2025-10-12 06:29:27,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:29:59] 2025-10-12 06:29:27,948 | INFO     | collected zombie processes
[2025-10-12 02:29:59] 2025-10-12 06:29:27,948 | INFO     | will attempt to kill all subprocesses of pid=3020747
[2025-10-12 02:29:59] 2025-10-12 06:29:28,209 | INFO     | process IDs to be killed: [3020747] (in reverse order)
[2025-10-12 02:29:59] 2025-10-12 06:29:28,283 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:29:59] 2025-10-12 06:29:28,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:29:59] 2025-10-12 06:29:28,292 | INFO     | did not find any defunct processes belonging to 3020747
[2025-10-12 02:29:59] 2025-10-12 06:29:28,299 | INFO     | did not find any defunct processes belonging to 3020747
[2025-10-12 02:29:59] 2025-10-12 06:29:28,300 | INFO     | ready for new job
[2025-10-12 02:29:59] 2025-10-12 06:29:28,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:29:59] 2025-10-12 06:29:28,302 | INFO     | ***************************************
[2025-10-12 02:29:59] 2025-10-12 06:29:28,302 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:29:59] 2025-10-12 06:29:28,302 | INFO     | ***************************************
[2025-10-12 02:29:59] 2025-10-12 06:29:28,302 | INFO     | 
[2025-10-12 02:29:59] 2025-10-12 06:29:28,316 | INFO     | architecture information:
[2025-10-12 02:29:59] 2025-10-12 06:29:28,316 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:29:59] 2025-10-12 06:29:28,326 | INFO     | cat /etc/os-release:
[2025-10-12 02:29:59] NAME="CentOS Linux"
[2025-10-12 02:29:59] VERSION="7 (Core)"
[2025-10-12 02:29:59] ID="centos"
[2025-10-12 02:29:59] ID_LIKE="rhel fedora"
[2025-10-12 02:29:59] VERSION_ID="7"
[2025-10-12 02:29:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:29:59] ANSI_COLOR="0;31"
[2025-10-12 02:29:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:29:59] HOME_URL="https://www.centos.org/"
[2025-10-12 02:29:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:29:59] 
[2025-10-12 02:29:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:29:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:29:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:29:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:29:59] 
[2025-10-12 02:29:59] 2025-10-12 06:29:28,327 | INFO     | ***************************************
[2025-10-12 02:29:59] 2025-10-12 06:29:28,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 02:29:59] 2025-10-12 06:29:28,844 | INFO     | sufficient remaining disk space (74376544256 B)
[2025-10-12 02:29:59] 2025-10-12 06:29:28,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:29:59] 2025-10-12 06:29:28,845 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:29:59] 2025-10-12 06:29:28,845 | INFO     | update_server=False
[2025-10-12 02:29:59] 2025-10-12 06:29:28,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:29:59] 2025-10-12 06:29:28,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:29:59] 2025-10-12 06:29:28,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:29:59] 2025-10-12 06:29:29,199 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 02:29:59] 2025-10-12 06:29:29,199 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 02:29:59] 2025-10-12 06:29:29,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:29:59] 2025-10-12 06:29:29,199 | INFO     | will abort loop
[2025-10-12 02:29:59] 2025-10-12 06:29:29,520 | INFO     | all job control threads have been joined
[2025-10-12 02:29:59] 2025-10-12 06:29:29,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:29:59] 2025-10-12 06:29:29,850 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:29,851 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:29,896 | INFO     | all payload control threads have been joined
[2025-10-12 02:29:59] 2025-10-12 06:29:29,897 | INFO     | all data control threads have been joined
[2025-10-12 02:29:59] 2025-10-12 06:29:29,897 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,187 | INFO     | [job] validate thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,204 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,263 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,341 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,525 | INFO     | [job] control thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,852 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,866 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,901 | INFO     | [payload] control thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:30,902 | INFO     | [data] control thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:31,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:31,044 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:31,054 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:33,657 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:29:59] 2025-10-12 06:29:49,181 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:29:59] 2025-10-12 06:29:49,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264011794240)>', '<ExcThread(monitor, started 140263297120000)>']
[2025-10-12 02:29:59] 2025-10-12 06:29:54,803 | INFO     | all workflow threads have been joined
[2025-10-12 02:29:59] 2025-10-12 06:29:54,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:29:59] 2025-10-12 06:29:54,804 | INFO     | traces error code: 0
[2025-10-12 02:29:59] 2025-10-12 06:29:54,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:29:59] 2025-10-12 06:29:59,642 | INFO     | PID=3014421 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:29:59] 2025-10-12 06:29:59,642 | INFO     | .. there are 6 such processes running
[2025-10-12 02:29:59] 2025-10-12 06:29:59,642 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:29:59] 2025-10-12 06:29:59,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:29:59] 2025-10-12 06:29:59,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:29:59] 2025-10-12 06:29:59,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:29:59] 2025-10-12 06:29:59,643 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 02:29:59] 2025-10-12 06:29:59,643 | INFO     | [monitor] control thread has ended
[2025-10-12 02:29:59] 2025-10-12 06:29:59,757 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:29:59] 2025-10-12 06:29:59,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:29:59] 2025-10-12 06:29:59,761 [wrapper] pilotpid: 3014421
[2025-10-12 02:29:59] 2025-10-12 06:29:59,764 [wrapper] Pilot exit status: 0
[2025-10-12 02:29:59] 2025-10-12 06:29:59,772 [wrapper] pandaids: 6839162648
[2025-10-12 02:29:59] 2025-10-12 06:29:59,819 [wrapper] cleanup supervisor_pilot 3240398 3014422
[2025-10-12 02:29:59] 2025-10-12 06:29:59,822 [wrapper] Test setup, not cleaning
[2025-10-12 02:29:59] 2025-10-12 06:29:59,824 [wrapper] apfmon messages muted
[2025-10-12 02:29:59] 2025-10-12 06:29:59,827 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:29:59] 2025-10-12 06:29:59,829 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:29:59]  *** Error codes and diagnostics ***
[2025-10-12 02:29:59]     "exeErrorCode": 0,
[2025-10-12 02:29:59]     "exeErrorDiag": "",
[2025-10-12 02:29:59]     "pilotErrorCode": 0,
[2025-10-12 02:29:59]     "pilotErrorDiag": "",
[2025-10-12 02:29:59]  *** Listing of results directory ***
[2025-10-12 02:29:59] total 406864
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 19:21 pilot3.tar.gz
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:33 queuedata.json
[2025-10-12 02:29:59] -rwx------. 1 boincer umatlas     36292 Oct 11 19:34 runpilot2-wrapper.sh
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:29:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:50 run_atlas
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:50 job.xml
[2025-10-12 02:29:59] -rw-r--r--. 2 boincer umatlas 220003026 Oct 12 00:50 EVNT.46676267._002714.pool.root.1
[2025-10-12 02:29:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:50 start_atlas.sh
[2025-10-12 02:29:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:50 shared
[2025-10-12 02:29:59] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:50 input.tar.gz
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:50 boinc_lockfile
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:50 pandaJob.out
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas    975512 Oct 12 00:50 agis_schedconf.cvmfs.json
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:29:59] drwx------. 5 boincer umatlas      4096 Oct 12 00:50 pilot3
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 02:18 init_data.xml
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas 190274496 Oct 12 02:28 HITS.46676269._067071.pool.root.1
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas       529 Oct 12 02:28 boinc_task_state.xml
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas      1033 Oct 12 02:29 memory_monitor_summary.json
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas    361465 Oct 12 02:29 log.46676269._067071.job.log.tgz.1
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas      7811 Oct 12 02:29 heartbeat.json
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas        95 Oct 12 02:29 pilot_heartbeat.json
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 02:29 boinc_mmap_file
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas        27 Oct 12 02:29 wrapper_checkpoint.txt
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas       892 Oct 12 02:29 pilotlog.txt
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas    863816 Oct 12 02:29 log.46676269._067071.job.log.1
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas       357 Oct 12 02:29 output.list
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas       620 Oct 12 02:29 runtime_log
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas   1249280 Oct 12 02:29 result.tar.gz
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas      8693 Oct 12 02:29 runtime_log.err
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas       650 Oct 12 02:29 PkWNDmLHyR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEoSMDmgarqin.diag
[2025-10-12 02:29:59] -rw-r--r--. 1 boincer umatlas     21815 Oct 12 02:29 stderr.txt
[2025-10-12 02:29:59] HITS file was successfully produced:
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas 190274496 Oct 12 02:28 shared/HITS.pool.root.1
[2025-10-12 02:29:59]  *** Contents of shared directory: ***
[2025-10-12 02:29:59] total 402464
[2025-10-12 02:29:59] -rw-r--r--. 2 boincer umatlas 220003026 Oct 12 00:50 ATLAS.root_0
[2025-10-12 02:29:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:50 start_atlas.sh
[2025-10-12 02:29:59] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:50 input.tar.gz
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas 190274496 Oct 12 02:28 HITS.pool.root.1
[2025-10-12 02:29:59] -rw-------. 1 boincer umatlas   1249280 Oct 12 02:29 result.tar.gz
02:30:01 (3010762): run_atlas exited; CPU time 43569.762509
02:30:01 (3010762): called boinc_finish(0)

</stderr_txt>
]]>

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