Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:28:37 (2516059): wrapper (7.7.26015): starting
12:28:37 (2516059): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 12:28:37] Arguments: --nthreads 4
[2025-10-13 12:28:37] Threads: 4
[2025-10-13 12:28:37] Checking for CVMFS
[2025-10-13 12:28:37] No cvmfs_config command found, will try listing directly
[2025-10-13 12:28:37] CVMFS is ok
[2025-10-13 12:28:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:28:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:28:37] Further information can be found at the LHC@home message board.
[2025-10-13 12:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:28:37] Checking for apptainer binary...
[2025-10-13 12:28:37] which: no apptainer in ((null))
[2025-10-13 12:28:37] apptainer is not installed, using version from CVMFS
[2025-10-13 12:28:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:28:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 12:28:37] apptainer works
[2025-10-13 12:28:37] Set ATHENA_PROC_NUMBER=4
[2025-10-13 12:28:37] Set ATHENA_CORE_NUMBER=4
[2025-10-13 12:28:37] Starting ATLAS job with PandaID=6838366113
[2025-10-13 12:28:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:08:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:08:34] 2025-10-13 13:06:03,928 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6838366113/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 15:08:34] 2025-10-13 13:06:03,929 | INFO     | extracted standard info from prmon json
[2025-10-13 15:08:34] 2025-10-13 13:06:03,929 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 15:08:34] 2025-10-13 13:06:03,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 15:08:34] 2025-10-13 13:06:03,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 15:08:34] 2025-10-13 13:06:03,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 15:08:34] 2025-10-13 13:06:03,933 | INFO     | fitting pss+swap vs Time
[2025-10-13 15:08:34] 2025-10-13 13:06:03,934 | INFO     | sum of square deviations: 1132458442.5
[2025-10-13 15:08:34] 2025-10-13 13:06:03,935 | INFO     | sum of deviations: 16968889994.500002
[2025-10-13 15:08:34] 2025-10-13 13:06:03,935 | INFO     | mean x: 1760356032.5
[2025-10-13 15:08:34] 2025-10-13 13:06:03,935 | INFO     | mean y: 2312662.0324675324
[2025-10-13 15:08:34] 2025-10-13 13:06:03,935 | INFO     | -- intersect: -26375068392.85509
[2025-10-13 15:08:34] 2025-10-13 13:06:03,935 | INFO     | intersect: -26375068392.85509
[2025-10-13 15:08:34] 2025-10-13 13:06:03,936 | INFO     | chi2: 1.3809242573068954
[2025-10-13 15:08:34] 2025-10-13 13:06:03,936 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,937 | INFO     | sum of deviations: 16417839022.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,937 | INFO     | mean x: 1760355880.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,937 | INFO     | mean y: 2311874.8389261747
[2025-10-13 15:08:34] 2025-10-13 13:06:03,937 | INFO     | -- intersect: -28174950857.821213
[2025-10-13 15:08:34] 2025-10-13 13:06:03,937 | INFO     | intersect: -28174950857.821213
[2025-10-13 15:08:34] 2025-10-13 13:06:03,937 | INFO     | chi2: 1.3822994168805824
[2025-10-13 15:08:34] 2025-10-13 13:06:03,938 | INFO     | current chi2=1.3822994168805824 (change=-0.09958254889148803 %)
[2025-10-13 15:08:34] 2025-10-13 13:06:03,938 | INFO     | right removable region: 148
[2025-10-13 15:08:34] 2025-10-13 13:06:03,938 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,939 | INFO     | sum of deviations: -2694750762.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,939 | INFO     | mean x: 1760356185.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,939 | INFO     | mean y: 2340261.0939597315
[2025-10-13 15:08:34] 2025-10-13 13:06:03,939 | INFO     | -- intersect: 4627231105.373013
[2025-10-13 15:08:34] 2025-10-13 13:06:03,939 | INFO     | intersect: 4627231105.373013
[2025-10-13 15:08:34] 2025-10-13 13:06:03,940 | INFO     | chi2: 0.004887166017828892
[2025-10-13 15:08:34] 2025-10-13 13:06:03,940 | INFO     | current chi2=0.004887166017828892 (change=99.6460945636975 %)
[2025-10-13 15:08:34] 2025-10-13 13:06:03,940 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,941 | INFO     | sum of deviations: -2864950003.5
[2025-10-13 15:08:34] 2025-10-13 13:06:03,941 | INFO     | mean x: 1760356337.5
[2025-10-13 15:08:34] 2025-10-13 13:06:03,941 | INFO     | mean y: 2340514.715277778
[2025-10-13 15:08:34] 2025-10-13 13:06:03,941 | INFO     | -- intersect: 5449532470.401448
[2025-10-13 15:08:34] 2025-10-13 13:06:03,941 | INFO     | intersect: 5449532470.401448
[2025-10-13 15:08:34] 2025-10-13 13:06:03,942 | INFO     | chi2: 0.0044180460767513354
[2025-10-13 15:08:34] 2025-10-13 13:06:03,942 | INFO     | current chi2=0.0044180460767513354 (change=9.599017904572058 %)
[2025-10-13 15:08:34] 2025-10-13 13:06:03,942 | INFO     | left removable region: 20
[2025-10-13 15:08:34] 2025-10-13 13:06:03,942 | INFO     | sum of square deviations: 650252192.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,943 | INFO     | sum of deviations: -2061158646.0
[2025-10-13 15:08:34] 2025-10-13 13:06:03,943 | INFO     | mean x: 1760356459.5
[2025-10-13 15:08:34] 2025-10-13 13:06:03,943 | INFO     | mean y: 2339425.359375
[2025-10-13 15:08:34] 2025-10-13 13:06:03,943 | INFO     | -- intersect: 5582288222.426058
[2025-10-13 15:08:34] 2025-10-13 13:06:03,943 | INFO     | intersect: 5582288222.426058
[2025-10-13 15:08:34] 2025-10-13 13:06:03,944 | INFO     | chi2: 0.004257068967600678
[2025-10-13 15:08:34] 2025-10-13 13:06:03,944 | INFO     | -- intersect: 5582288222.426058
[2025-10-13 15:08:34] 2025-10-13 13:06:03,944 | INFO     | current memory leak: -3.17 B/s (using 128 data points, chi2=0.00)
[2025-10-13 15:08:34] 2025-10-13 13:06:03,944 | INFO     | could have reported an average CPU frequency of 2713 MHz (9 samples)
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | ..............................
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . Timing measurements:
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . get job = 0 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . initial setup = 1 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . payload setup = 9 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . stage-in = 0 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . payload execution = 9391 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . stage-out = 0 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | . log creation = 0 s
[2025-10-13 15:08:34] 2025-10-13 13:06:03,945 | INFO     | ..............................
[2025-10-13 15:08:34] 2025-10-13 13:06:04,053 | INFO     | 
[2025-10-13 15:08:34] 2025-10-13 13:06:04,057 | INFO     | job summary report
[2025-10-13 15:08:34] 2025-10-13 13:06:04,057 | INFO     | --------------------------------------------------
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | PanDA job id: 6838366113
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | task id: 46676269
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | errors: (none)
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | pilot state: finished 
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | transexitcode: 0
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | exeerrorcode: 0
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | exeerrordiag: 
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | exitcode: 0
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | exitmsg: OK
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | cpuconsumptiontime: 35971 s
[2025-10-13 15:08:34] 2025-10-13 13:06:04,058 | INFO     | nevents: 400
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | neventsw: 0
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | pid: 2553648
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | pgrp: 2553648
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | corecount: 4
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | event service: False
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | sizes: {0: 2348754, 1: 2348896, 8: 2349158, 11: 2349186, 9404: 2377882, 9405: 2386904, 9408: 2387088, 9414: 2387374}
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | --------------------------------------------------
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | 
[2025-10-13 15:08:34] 2025-10-13 13:06:04,059 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-13 15:08:34] 2025-10-13 13:06:04,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:08:34] 2025-10-13 13:06:04,091 | INFO     | job 6838366113 has completed (purged errors)
[2025-10-13 15:08:34] 2025-10-13 13:06:04,092 | INFO     | overall cleanup function is called
[2025-10-13 15:08:34] 2025-10-13 13:06:05,102 | INFO     | --- collectZombieJob: --- 10, [2553648]
[2025-10-13 15:08:34] 2025-10-13 13:06:05,103 | INFO     | zombie collector waiting for pid 2553648
[2025-10-13 15:08:34] 2025-10-13 13:06:05,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:08:34] 2025-10-13 13:06:05,104 | INFO     | collected zombie processes
[2025-10-13 15:08:34] 2025-10-13 13:06:05,104 | INFO     | will attempt to kill all subprocesses of pid=2553648
[2025-10-13 15:08:34] 2025-10-13 13:06:06,216 | INFO     | number of running child processes to parent process 2553648: 1
[2025-10-13 15:08:34] 2025-10-13 13:06:06,217 | INFO     | maximum number of monitored processes: 6
[2025-10-13 15:08:34] 2025-10-13 13:06:06,217 | INFO     | aborting job monitoring since job object (job id=6838366113) has expired
[2025-10-13 15:08:34] 2025-10-13 13:06:07,143 | INFO     | PID=2526274 has CPU usage=30.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 15:08:34] 2025-10-13 13:06:07,143 | INFO     | .. there are 10 such processes running
[2025-10-13 15:08:34] 2025-10-13 13:06:07,330 | INFO     | process IDs to be killed: [2553648] (in reverse order)
[2025-10-13 15:08:34] 2025-10-13 13:06:07,572 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:08:34] 2025-10-13 13:06:07,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:08:34] 2025-10-13 13:06:07,605 | INFO     | did not find any defunct processes belonging to 2553648
[2025-10-13 15:08:34] 2025-10-13 13:06:07,633 | INFO     | did not find any defunct processes belonging to 2553648
[2025-10-13 15:08:34] 2025-10-13 13:06:07,633 | INFO     | ready for new job
[2025-10-13 15:08:34] 2025-10-13 13:06:07,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:08:34] 2025-10-13 13:06:07,636 | INFO     | ***************************************
[2025-10-13 15:08:34] 2025-10-13 13:06:07,636 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:08:34] 2025-10-13 13:06:07,636 | INFO     | ***************************************
[2025-10-13 15:08:34] 2025-10-13 13:06:07,636 | INFO     | 
[2025-10-13 15:08:34] 2025-10-13 13:06:07,645 | INFO     | architecture information:
[2025-10-13 15:08:34] 2025-10-13 13:06:07,645 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:08:34] 2025-10-13 13:06:07,670 | INFO     | cat /etc/os-release:
[2025-10-13 15:08:34] NAME="CentOS Linux"
[2025-10-13 15:08:34] VERSION="7 (Core)"
[2025-10-13 15:08:34] ID="centos"
[2025-10-13 15:08:34] ID_LIKE="rhel fedora"
[2025-10-13 15:08:34] VERSION_ID="7"
[2025-10-13 15:08:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:08:34] ANSI_COLOR="0;31"
[2025-10-13 15:08:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:08:34] HOME_URL="https://www.centos.org/"
[2025-10-13 15:08:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:08:34] 
[2025-10-13 15:08:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:08:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:08:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:08:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:08:34] 
[2025-10-13 15:08:34] 2025-10-13 13:06:07,670 | INFO     | ***************************************
[2025-10-13 15:08:34] 2025-10-13 13:06:08,173 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-13 15:08:34] 2025-10-13 13:06:08,197 | INFO     | sufficient remaining disk space (3339753357312 B)
[2025-10-13 15:08:34] 2025-10-13 13:06:08,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:08:34] 2025-10-13 13:06:08,198 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:08:34] 2025-10-13 13:06:08,198 | INFO     | update_server=False
[2025-10-13 15:08:34] 2025-10-13 13:06:08,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:08:34] 2025-10-13 13:06:08,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:08:34] 2025-10-13 13:06:08,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:08:34] 2025-10-13 13:06:08,199 | INFO     | aborting loop
[2025-10-13 15:08:34] 2025-10-13 13:06:08,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:08:34] 2025-10-13 13:06:09,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:08:34] 2025-10-13 13:06:09,098 | INFO     | all job control threads have been joined
[2025-10-13 15:08:34] 2025-10-13 13:06:09,190 | INFO     | all data control threads have been joined
[2025-10-13 15:08:34] 2025-10-13 13:06:09,202 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:09,203 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:09,295 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:09,304 | INFO     | all payload control threads have been joined
[2025-10-13 15:08:34] 2025-10-13 13:06:09,305 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:09,518 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:09,678 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:09,863 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,069 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,103 | INFO     | [job] control thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,195 | INFO     | [data] control thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,204 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,309 | INFO     | [payload] control thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,588 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,598 | INFO     | [job] validate thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:10,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:12,211 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:08:34] 2025-10-13 13:06:40,171 | INFO     | PID=2526274 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:08:34] 2025-10-13 13:06:40,171 | INFO     | .. there are 11 such processes running
[2025-10-13 15:08:34] 2025-10-13 13:06:40,172 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:08:34] 2025-10-13 13:06:40,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:08:34] 2025-10-13 13:06:40,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:08:34] 2025-10-13 13:07:06,262 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:08:34] 2025-10-13 13:07:06,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23174690871104)>', '<ExcThread(monitor, started 23174452311808)>']
[2025-10-13 15:08:34] 2025-10-13 13:07:07,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:08:34] 2025-10-13 13:07:07,306 | INFO     | [monitor] control thread has ended
[2025-10-13 15:08:34] 2025-10-13 13:07:11,670 | INFO     | all workflow threads have been joined
[2025-10-13 15:08:34] 2025-10-13 13:07:11,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:08:34] 2025-10-13 13:07:11,671 | INFO     | traces error code: 0
[2025-10-13 15:08:34] 2025-10-13 13:07:11,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:08:34] 2025-10-13 13:07:11,833 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:08:34] 2025-10-13 13:07:11,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:08:34] 2025-10-13 13:07:11,841 [wrapper] pilotpid: 2526274
[2025-10-13 15:08:34] 2025-10-13 13:07:11,845 [wrapper] Pilot exit status: 0
[2025-10-13 15:08:34] 2025-10-13 13:07:11,860 [wrapper] pandaids: 6838366113
[2025-10-13 15:08:34] 2025-10-13 13:07:12,037 [wrapper] cleanup supervisor_pilot 2940321 2526276
[2025-10-13 15:08:34] 2025-10-13 13:07:12,041 [wrapper] Test setup, not cleaning
[2025-10-13 15:08:34] 2025-10-13 13:07:12,045 [wrapper] apfmon messages muted
[2025-10-13 15:08:34] 2025-10-13 13:07:12,049 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:08:34] 2025-10-13 13:07:12,053 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:08:34]  *** Error codes and diagnostics ***
[2025-10-13 15:08:34]     "exeErrorCode": 0,
[2025-10-13 15:08:34]     "exeErrorDiag": "",
[2025-10-13 15:08:34]     "pilotErrorCode": 0,
[2025-10-13 15:08:34]     "pilotErrorDiag": "",
[2025-10-13 15:08:34]  *** Listing of results directory ***
[2025-10-13 15:08:34] total 410836
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc    557409 Oct 11 13:21 pilot3.tar.gz
[2025-10-13 15:08:34] -rwx------ 1 boinc boinc     36292 Oct 11 13:39 runpilot2-wrapper.sh
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc      5112 Oct 11 13:39 queuedata.json
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:08:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:28 run_atlas
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:28 job.xml
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc      6688 Oct 13 12:28 init_data.xml
[2025-10-13 15:08:34] -rw-r--r-- 2 boinc boinc 219497964 Oct 13 12:28 EVNT.46676267._002289.pool.root.1
[2025-10-13 15:08:34] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:28 start_atlas.sh
[2025-10-13 15:08:34] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:28 shared
[2025-10-13 15:08:34] -rw-r--r-- 2 boinc boinc    569679 Oct 13 12:28 input.tar.gz
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:28 boinc_lockfile
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:28 pandaJob.out
[2025-10-13 15:08:34] -rw------- 1 boinc boinc    972497 Oct 13 12:28 agis_schedconf.cvmfs.json
[2025-10-13 15:08:34] -rw------- 1 boinc boinc   1560580 Oct 13 12:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:08:34] drwx------ 5 boinc boinc      4096 Oct 13 12:28 pilot3
[2025-10-13 15:08:34] -rw------- 1 boinc boinc 193952270 Oct 13 15:05 HITS.46676269._057031.pool.root.1
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc       528 Oct 13 15:05 boinc_task_state.xml
[2025-10-13 15:08:34] -rw------- 1 boinc boinc      1027 Oct 13 15:05 memory_monitor_summary.json
[2025-10-13 15:08:34] -rw------- 1 boinc boinc    348086 Oct 13 15:05 log.46676269._057031.job.log.tgz.1
[2025-10-13 15:08:34] -rw------- 1 boinc boinc      7783 Oct 13 15:06 heartbeat.json
[2025-10-13 15:08:34] -rw------- 1 boinc boinc        95 Oct 13 15:06 pilot_heartbeat.json
[2025-10-13 15:08:34] -rw------- 1 boinc boinc      4836 Oct 13 15:07 pilotlog.txt
[2025-10-13 15:08:34] -rw------- 1 boinc boinc   1326896 Oct 13 15:07 log.46676269._057031.job.log.1
[2025-10-13 15:08:34] -rw------- 1 boinc boinc       357 Oct 13 15:07 output.list
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:07 runtime_log
[2025-10-13 15:08:34] -rw------- 1 boinc boinc   1689600 Oct 13 15:07 result.tar.gz
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc      9084 Oct 13 15:07 runtime_log.err
[2025-10-13 15:08:34] -rw------- 1 boinc boinc       663 Oct 13 15:07 TAXMDm67mR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2KgNDmYOS5Xm.diag
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc        26 Oct 13 15:08 wrapper_checkpoint.txt
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:08 boinc_mmap_file
[2025-10-13 15:08:34] -rw-r--r-- 1 boinc boinc     20984 Oct 13 15:08 stderr.txt
[2025-10-13 15:08:34] HITS file was successfully produced:
[2025-10-13 15:08:34] -rw------- 1 boinc boinc 193952270 Oct 13 15:05 shared/HITS.pool.root.1
[2025-10-13 15:08:34]  *** Contents of shared directory: ***
[2025-10-13 15:08:34] total 406000
[2025-10-13 15:08:34] -rw-r--r-- 2 boinc boinc 219497964 Oct 13 12:28 ATLAS.root_0
[2025-10-13 15:08:34] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:28 start_atlas.sh
[2025-10-13 15:08:34] -rw-r--r-- 2 boinc boinc    569679 Oct 13 12:28 input.tar.gz
[2025-10-13 15:08:34] -rw------- 1 boinc boinc 193952270 Oct 13 15:05 HITS.pool.root.1
[2025-10-13 15:08:34] -rw------- 1 boinc boinc   1689600 Oct 13 15:07 result.tar.gz
15:08:35 (2516059): run_atlas exited; CPU time 36522.057869
15:08:35 (2516059): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN