Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:50:48 (17230): wrapper (7.7.26015): starting
00:50:48 (17230): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:50:48] Arguments: --nthreads 8
[2025-10-12 00:50:48] Threads: 8
[2025-10-12 00:50:48] Checking for CVMFS
[2025-10-12 00:50:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:50:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:50:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:50:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:50:48] 2.11.2.0 2880 88140 81336 151608 2 59 13388462 20275200 1 130560 0 42975192 99.988 2787254 18104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:50:48] CVMFS is ok
[2025-10-12 00:50:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:50:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:50:48] Further information can be found at the LHC@home message board.
[2025-10-12 00:50:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:50:48] Checking for apptainer binary...
[2025-10-12 00:50:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:50:48] Running /usr/bin/apptainer --version
[2025-10-12 00:50:48] apptainer version 1.3.2-1.el7
[2025-10-12 00:50:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:50:50] c-115-10.aglt2.org
[2025-10-12 00:50:50] apptainer works
[2025-10-12 00:50:50] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:50:50] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:50:50] Starting ATLAS job with PandaID=6839162579
[2025-10-12 00:50:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:47:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:47:28] 2025-10-12 06:46:54,787 | INFO     | intersect: 6954747106.453183
[2025-10-12 02:47:28] 2025-10-12 06:46:54,787 | INFO     | chi2: 2.23855736373868
[2025-10-12 02:47:28] 2025-10-12 06:46:54,787 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,788 | INFO     | sum of deviations: 5719159432.000002
[2025-10-12 02:47:28] 2025-10-12 06:46:54,788 | INFO     | mean x: 1760247992.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,788 | INFO     | mean y: 2517922.853211009
[2025-10-12 02:47:28] 2025-10-12 06:46:54,788 | INFO     | -- intersect: -25069234954.775894
[2025-10-12 02:47:28] 2025-10-12 06:46:54,788 | INFO     | intersect: -25069234954.775894
[2025-10-12 02:47:28] 2025-10-12 06:46:54,788 | INFO     | chi2: 1.4764863919832414
[2025-10-12 02:47:28] 2025-10-12 06:46:54,789 | INFO     | current chi2=1.4764863919832414 (change=34.04295034381794 %)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,789 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,790 | INFO     | sum of deviations: 5545669453.999999
[2025-10-12 02:47:28] 2025-10-12 06:46:54,790 | INFO     | mean x: 1760247839.5
[2025-10-12 02:47:28] 2025-10-12 06:46:54,790 | INFO     | mean y: 2517421.1153846155
[2025-10-12 02:47:28] 2025-10-12 06:46:54,790 | INFO     | -- intersect: -27986619912.103233
[2025-10-12 02:47:28] 2025-10-12 06:46:54,790 | INFO     | intersect: -27986619912.103233
[2025-10-12 02:47:28] 2025-10-12 06:46:54,790 | INFO     | sufficient remaining disk space (18579718144 B)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,791 | INFO     | chi2: 1.4791620704636061
[2025-10-12 02:47:28] 2025-10-12 06:46:54,791 | INFO     | current chi2=1.4791620704636061 (change=-0.18121931193492047 %)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,791 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,791 | INFO     | right removable region: 103
[2025-10-12 02:47:28] 2025-10-12 06:46:54,792 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,792 | INFO     | sum of deviations: -17498643731.999996
[2025-10-12 02:47:28] 2025-10-12 06:46:54,792 | INFO     | mean x: 1760248297.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,792 | INFO     | mean y: 2539216.3027522936
[2025-10-12 02:47:28] 2025-10-12 06:46:54,792 | INFO     | -- intersect: 76713418249.57281
[2025-10-12 02:47:28] 2025-10-12 06:46:54,793 | INFO     | intersect: 76713418249.57281
[2025-10-12 02:47:28] 2025-10-12 06:46:54,793 | INFO     | chi2: 0.8911603876145882
[2025-10-12 02:47:28] 2025-10-12 06:46:54,793 | INFO     | current chi2=0.8911603876145882 (change=60.19041539653757 %)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,793 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,794 | INFO     | sum of deviations: -15299936735.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,794 | INFO     | mean x: 1760248449.5
[2025-10-12 02:47:28] 2025-10-12 06:46:54,794 | INFO     | mean y: 2532741.1346153845
[2025-10-12 02:47:28] 2025-10-12 06:46:54,794 | INFO     | -- intersect: 77221736377.0502
[2025-10-12 02:47:28] 2025-10-12 06:46:54,794 | INFO     | intersect: 77221736377.0502
[2025-10-12 02:47:28] 2025-10-12 06:46:54,795 | INFO     | chi2: 0.8813819995655706
[2025-10-12 02:47:28] 2025-10-12 06:46:54,795 | INFO     | current chi2=0.8813819995655706 (change=1.0972646658130554 %)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,795 | INFO     | left removable region: 20
[2025-10-12 02:47:28] 2025-10-12 06:46:54,795 | INFO     | sum of square deviations: 177275882.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,795 | INFO     | sum of deviations: -1010154144.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,796 | INFO     | mean x: 1760248419.0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,796 | INFO     | mean y: 2530190.2771084337
[2025-10-12 02:47:28] 2025-10-12 06:46:54,796 | INFO     | -- intersect: 10032784812.969091
[2025-10-12 02:47:28] 2025-10-12 06:46:54,796 | INFO     | intersect: 10032784812.969091
[2025-10-12 02:47:28] 2025-10-12 06:46:54,796 | INFO     | chi2: 0.0242212291254784
[2025-10-12 02:47:28] 2025-10-12 06:46:54,796 | INFO     | -- intersect: 10032784812.969091
[2025-10-12 02:47:28] 2025-10-12 06:46:54,797 | INFO     | current memory leak: -5.70 B/s (using 83 data points, chi2=0.02)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,797 | INFO     | could have reported an average CPU frequency of 2119 MHz (7 samples)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,797 | INFO     | ..............................
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . Timing measurements:
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . get job = 0 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . initial setup = 2 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . payload setup = 8 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . stage-in = 0 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . payload execution = 6909 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,798 | INFO     | . stage-out = 0 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,799 | INFO     | . log creation = 0 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,799 | INFO     | ..............................
[2025-10-12 02:47:28] 2025-10-12 06:46:54,800 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6839162579: 3301311 B (within 2537553920 B limit)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,810 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6839162579/HITS.46676269._067002.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,821 | INFO     | total size of present files: 0 B (workdir size: 3301311 B)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,836 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6839162579/HITS.46676269._067002.pool.root.1 since it does not exist
[2025-10-12 02:47:28] 2025-10-12 06:46:54,885 | INFO     | 
[2025-10-12 02:47:28] 2025-10-12 06:46:54,885 | INFO     | job summary report
[2025-10-12 02:47:28] 2025-10-12 06:46:54,885 | INFO     | --------------------------------------------------
[2025-10-12 02:47:28] 2025-10-12 06:46:54,886 | INFO     | PanDA job id: 6839162579
[2025-10-12 02:47:28] 2025-10-12 06:46:54,886 | INFO     | task id: 46676269
[2025-10-12 02:47:28] 2025-10-12 06:46:54,886 | INFO     | errors: (none)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:47:28] 2025-10-12 06:46:54,886 | INFO     | pilot state: finished 
[2025-10-12 02:47:28] 2025-10-12 06:46:54,886 | INFO     | transexitcode: 0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | exeerrorcode: 0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | exeerrordiag: 
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | exitcode: 0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | exitmsg: OK
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | cpuconsumptiontime: 51710 s
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | nevents: 400
[2025-10-12 02:47:28] 2025-10-12 06:46:54,887 | INFO     | neventsw: 0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | pid: 27314
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | pgrp: 27314
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | corecount: 8
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | event service: False
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | sizes: {0: 2348029, 1: 2348885, 7: 2349147, 12: 2349175, 6921: 2376345, 6923: 2385527, 6931: 2385693}
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | --------------------------------------------------
[2025-10-12 02:47:28] 2025-10-12 06:46:54,888 | INFO     | 
[2025-10-12 02:47:28] 2025-10-12 06:46:54,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 02:47:28] 2025-10-12 06:46:54,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:47:28] 2025-10-12 06:46:54,917 | INFO     | job 6839162579 has completed (purged errors)
[2025-10-12 02:47:28] 2025-10-12 06:46:54,918 | INFO     | overall cleanup function is called
[2025-10-12 02:47:28] 2025-10-12 06:46:54,986 | INFO     | number of running child processes to parent process 27314: 1
[2025-10-12 02:47:28] 2025-10-12 06:46:54,986 | INFO     | maximum number of monitored processes: 6
[2025-10-12 02:47:28] 2025-10-12 06:46:54,987 | INFO     | aborting job monitoring since job object (job id=6839162579) has expired
[2025-10-12 02:47:28] 2025-10-12 06:46:55,926 | INFO     | --- collectZombieJob: --- 10, [27314]
[2025-10-12 02:47:28] 2025-10-12 06:46:55,927 | INFO     | zombie collector waiting for pid 27314
[2025-10-12 02:47:28] 2025-10-12 06:46:55,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:47:28] 2025-10-12 06:46:55,927 | INFO     | collected zombie processes
[2025-10-12 02:47:28] 2025-10-12 06:46:55,927 | INFO     | will attempt to kill all subprocesses of pid=27314
[2025-10-12 02:47:28] 2025-10-12 06:46:56,009 | INFO     | process IDs to be killed: [27314] (in reverse order)
[2025-10-12 02:47:28] 2025-10-12 06:46:56,062 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:47:28] 2025-10-12 06:46:56,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:47:28] 2025-10-12 06:46:56,067 | INFO     | did not find any defunct processes belonging to 27314
[2025-10-12 02:47:28] 2025-10-12 06:46:56,070 | INFO     | did not find any defunct processes belonging to 27314
[2025-10-12 02:47:28] 2025-10-12 06:46:56,070 | INFO     | ready for new job
[2025-10-12 02:47:28] 2025-10-12 06:46:56,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:47:28] 2025-10-12 06:46:56,072 | INFO     | ***************************************
[2025-10-12 02:47:28] 2025-10-12 06:46:56,072 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:47:28] 2025-10-12 06:46:56,072 | INFO     | ***************************************
[2025-10-12 02:47:28] 2025-10-12 06:46:56,072 | INFO     | 
[2025-10-12 02:47:28] 2025-10-12 06:46:56,073 | INFO     | architecture information:
[2025-10-12 02:47:28] 2025-10-12 06:46:56,073 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:47:28] 2025-10-12 06:46:56,091 | INFO     | cat /etc/os-release:
[2025-10-12 02:47:28] NAME="CentOS Linux"
[2025-10-12 02:47:28] VERSION="7 (Core)"
[2025-10-12 02:47:28] ID="centos"
[2025-10-12 02:47:28] ID_LIKE="rhel fedora"
[2025-10-12 02:47:28] VERSION_ID="7"
[2025-10-12 02:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:47:28] ANSI_COLOR="0;31"
[2025-10-12 02:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:47:28] HOME_URL="https://www.centos.org/"
[2025-10-12 02:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:47:28] 
[2025-10-12 02:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:47:28] 
[2025-10-12 02:47:28] 2025-10-12 06:46:56,092 | INFO     | ***************************************
[2025-10-12 02:47:28] 2025-10-12 06:46:56,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 02:47:28] 2025-10-12 06:46:56,617 | INFO     | sufficient remaining disk space (18583912448 B)
[2025-10-12 02:47:28] 2025-10-12 06:46:56,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:47:28] 2025-10-12 06:46:56,618 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:47:28] 2025-10-12 06:46:56,618 | INFO     | update_server=False
[2025-10-12 02:47:28] 2025-10-12 06:46:56,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:47:28] 2025-10-12 06:46:56,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:47:28] 2025-10-12 06:46:56,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:47:28] 2025-10-12 06:46:56,619 | INFO     | aborting loop
[2025-10-12 02:47:28] 2025-10-12 06:46:57,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:47:28] 2025-10-12 06:46:57,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:47:28] 2025-10-12 06:46:57,298 | INFO     | all payload control threads have been joined
[2025-10-12 02:47:28] 2025-10-12 06:46:57,620 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:57,623 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:57,625 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:57,678 | INFO     | all job control threads have been joined
[2025-10-12 02:47:28] 2025-10-12 06:46:57,700 | INFO     | all data control threads have been joined
[2025-10-12 02:47:28] 2025-10-12 06:46:57,735 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,210 | INFO     | [job] validate thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,214 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,217 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,304 | INFO     | [payload] control thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,354 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,652 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,684 | INFO     | [job] control thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,705 | INFO     | [data] control thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:58,934 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:46:59,035 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:47:01,259 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:47:06,661 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:47:28] 2025-10-12 06:47:07,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:47:28] 2025-10-12 06:47:17,941 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:47:28] 2025-10-12 06:47:19,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707458656064)>', '<ExcThread(monitor, started 140706710529792)>']
[2025-10-12 02:47:28] 2025-10-12 06:47:24,807 | INFO     | all workflow threads have been joined
[2025-10-12 02:47:28] 2025-10-12 06:47:24,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:47:28] 2025-10-12 06:47:24,808 | INFO     | traces error code: 0
[2025-10-12 02:47:28] 2025-10-12 06:47:24,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:47:28] 2025-10-12 06:47:27,801 | INFO     | PID=20945 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 02:47:28] 2025-10-12 06:47:27,801 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:47:28] 2025-10-12 06:47:27,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:47:28] 2025-10-12 06:47:27,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:47:28] 2025-10-12 06:47:27,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:47:28] 2025-10-12 06:47:27,802 | INFO     | [monitor] control thread has ended
[2025-10-12 02:47:28] 2025-10-12 06:47:27,915 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:47:28] 2025-10-12 06:47:27,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:47:28] 2025-10-12 06:47:27,923 [wrapper] pilotpid: 20945
[2025-10-12 02:47:28] 2025-10-12 06:47:27,928 [wrapper] Pilot exit status: 0
[2025-10-12 02:47:28] 2025-10-12 06:47:27,946 [wrapper] pandaids: 6839162579
[2025-10-12 02:47:28] 2025-10-12 06:47:27,987 [wrapper] cleanup supervisor_pilot 10169 20946
[2025-10-12 02:47:28] 2025-10-12 06:47:27,992 [wrapper] Test setup, not cleaning
[2025-10-12 02:47:28] 2025-10-12 06:47:27,996 [wrapper] apfmon messages muted
[2025-10-12 02:47:28] 2025-10-12 06:47:28,001 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:47:28] 2025-10-12 06:47:28,006 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:47:28]  *** Error codes and diagnostics ***
[2025-10-12 02:47:28]     "exeErrorCode": 0,
[2025-10-12 02:47:28]     "exeErrorDiag": "",
[2025-10-12 02:47:28]     "pilotErrorCode": 0,
[2025-10-12 02:47:28]     "pilotErrorDiag": "",
[2025-10-12 02:47:28]  *** Listing of results directory ***
[2025-10-12 02:47:28] total 417200
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 19:21 pilot3.tar.gz
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 19:29 queuedata.json
[2025-10-12 02:47:28] -rwx------ 1 boincer umatlas     36292 Oct 11 19:30 runpilot2-wrapper.sh
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas       100 Oct 12 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:47:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 00:50 run_atlas
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas       105 Oct 12 00:50 job.xml
[2025-10-12 02:47:28] -rw-r--r-- 2 boincer umatlas 221412656 Oct 12 00:50 EVNT.46676267._002712.pool.root.1
[2025-10-12 02:47:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:50 start_atlas.sh
[2025-10-12 02:47:28] drwxrwx--x 2 boincer umatlas      4096 Oct 12 00:50 shared
[2025-10-12 02:47:28] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 00:50 input.tar.gz
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas         0 Oct 12 00:50 boinc_lockfile
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 00:50 pandaJob.out
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas    975512 Oct 12 00:51 agis_schedconf.cvmfs.json
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas   1560580 Oct 12 00:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:47:28] drwx------ 5 boincer umatlas      4096 Oct 12 00:51 pilot3
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas 199241575 Oct 12 02:46 HITS.46676269._067002.pool.root.1
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas        95 Oct 12 02:46 pilot_heartbeat.json
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas      1051 Oct 12 02:46 memory_monitor_summary.json
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas       529 Oct 12 02:46 boinc_task_state.xml
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas    350464 Oct 12 02:46 log.46676269._067002.job.log.tgz.1
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas      7843 Oct 12 02:46 heartbeat.json
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 02:46 init_data.xml
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 02:47 boinc_mmap_file
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas        27 Oct 12 02:47 wrapper_checkpoint.txt
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas       745 Oct 12 02:47 pilotlog.txt
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas    981565 Oct 12 02:47 log.46676269._067002.job.log.1
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas       357 Oct 12 02:47 output.list
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas       620 Oct 12 02:47 runtime_log
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas   1351680 Oct 12 02:47 result.tar.gz
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas       659 Oct 12 02:47 v7mLDmRDyR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcnSMDmF6MWAn.diag
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 02:47 runtime_log.err
[2025-10-12 02:47:28] -rw-r--r-- 1 boincer umatlas     21302 Oct 12 02:47 stderr.txt
[2025-10-12 02:47:28] HITS file was successfully produced:
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas 199241575 Oct 12 02:46 shared/HITS.pool.root.1
[2025-10-12 02:47:28]  *** Contents of shared directory: ***
[2025-10-12 02:47:28] total 412696
[2025-10-12 02:47:28] -rw-r--r-- 2 boincer umatlas 221412656 Oct 12 00:50 ATLAS.root_0
[2025-10-12 02:47:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:50 start_atlas.sh
[2025-10-12 02:47:28] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 00:50 input.tar.gz
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas 199241575 Oct 12 02:46 HITS.pool.root.1
[2025-10-12 02:47:28] -rw------- 1 boincer umatlas   1351680 Oct 12 02:47 result.tar.gz
02:47:29 (17230): run_atlas exited; CPU time 51722.348794
02:47:29 (17230): called boinc_finish(0)

</stderr_txt>
]]>

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