Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:34:26 (470849): wrapper (7.7.26015): starting
21:34:26 (470849): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 21:34:26] Arguments: --nthreads 12
[2025-10-11 21:34:26] Threads: 12
[2025-10-11 21:34:26] Checking for CVMFS
[2025-10-11 21:34:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:34:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:34:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:34:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:34:29] 2.11.5.0 2829 30981 297664 151608 3 357 27908147 45568001 19395 130560 0 313675877 99.867 131361596 26119 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 21:34:29] CVMFS is ok
[2025-10-11 21:34:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:34:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:34:29] Further information can be found at the LHC@home message board.
[2025-10-11 21:34:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:34:29] Checking for apptainer binary...
[2025-10-11 21:34:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:34:29] Running /usr/bin/apptainer --version
[2025-10-11 21:34:29] apptainer version 1.4.1-1.el9
[2025-10-11 21:34:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:34:30] wns0092.triumf.lcg
[2025-10-11 21:34:30] apptainer works
[2025-10-11 21:34:30] Set ATHENA_PROC_NUMBER=12
[2025-10-11 21:34:30] Set ATHENA_CORE_NUMBER=12
[2025-10-11 21:34:30] Starting ATLAS job with PandaID=6839316548
[2025-10-11 21:34:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:40:16]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | WARNING  | wrong length of table data, x=[1760243805.0], y=[2301.0] (must be same and length>=4)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | ..............................
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . Timing measurements:
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . get job = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . initial setup = 4 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . payload setup = 25 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . stage-in = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . payload execution = 53 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . stage-out = 1 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . log creation = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | ..............................
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839316548/pilotlog.txt
[2025-10-11 21:40:16] 2025-10-12 04:39:31,156 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 21:40:16] - Log from pilotlog.txt -
[2025-10-11 21:40:16] 2025-10-12 04:39:31,111 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839316548/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,111 | INFO     | extracted standard info from prmon json
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | WARNING  | wrong length of table data, x=[1760243805.0], y=[2301.0] (must be same and length>=4)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | ..............................
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . Timing measurements:
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . get job = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . initial setup = 4 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . payload setup = 25 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . stage-in = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . payload execution = 53 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . stage-out = 1 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . log creation = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | ..............................
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839316548/pilotlog.txt
[2025-10-11 21:40:16] 2025-10-12 04:39:31,156 | WARNING  | 
[2025-10-11 21:40:16] [begin log extracts]
[2025-10-11 21:40:16] - Log from pilotlog.txt -
[2025-10-11 21:40:16] 2025-10-12 04:39:31,111 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839316548/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,111 | INFO     | extracted standard info from prmon json
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:40:16] 2025-10-12 04:39:31,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | WARNING  | wrong length of table data, x=[1760243805.0], y=[2301.0] (must be same and length>=4)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | ..............................
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . Timing measurements:
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . get job = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . initial setup = 4 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . payload setup = 25 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . stage-in = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . payload execution = 53 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . stage-out = 1 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | . log creation = 0 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | ..............................
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 21:40:16] 2025-10-12 04:39:31,113 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839316548/pilotlog.txt
[2025-10-11 21:40:16] [end log extracts]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,156 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,157 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | 
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | job summary report
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | --------------------------------------------------
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | PanDA job id: 6839316548
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | task id: 46676269
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 21:37:03,714 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 21:40:16] 2025-10-12 04:39:31,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | pilot state: failed 
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | transexitcode: 65
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | exeerrorcode: 65
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | exitcode: 65
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | nevents: 0
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | neventsw: 0
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | pid: 481524
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | pgrp: 481524
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | corecount: 12
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | event service: False
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | sizes: {0: 2348632, 1: 2348831, 2: 2348859, 13: 2348859, 17: 2349177, 24: 2349205, 84: 2372598, 85: 2372574, 87: 2376894, 90: 2376922, 222: 2377088}
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | --------------------------------------------------
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | 
[2025-10-11 21:40:16] 2025-10-12 04:39:31,334 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 21:40:16] 2025-10-12 04:39:31,483 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:40:16] 2025-10-12 04:39:31,504 | INFO     | job 6839316548 has completed (purged errors)
[2025-10-11 21:40:16] 2025-10-12 04:39:31,504 | INFO     | overall cleanup function is called
[2025-10-11 21:40:16] 2025-10-12 04:39:32,552 | INFO     | --- collectZombieJob: --- 10, [481524]
[2025-10-11 21:40:16] 2025-10-12 04:39:32,553 | INFO     | zombie collector waiting for pid 481524
[2025-10-11 21:40:16] 2025-10-12 04:39:32,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:40:16] 2025-10-12 04:39:32,553 | INFO     | collected zombie processes
[2025-10-11 21:40:16] 2025-10-12 04:39:32,553 | INFO     | will attempt to kill all subprocesses of pid=481524
[2025-10-11 21:40:16] 2025-10-12 04:39:33,651 | INFO     | process IDs to be killed: [481524] (in reverse order)
[2025-10-11 21:40:16] 2025-10-12 04:39:33,923 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:40:16] 2025-10-12 04:39:33,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:40:16] 2025-10-12 04:39:33,962 | INFO     | did not find any defunct processes belonging to 481524
[2025-10-11 21:40:16] 2025-10-12 04:39:34,018 | INFO     | did not find any defunct processes belonging to 481524
[2025-10-11 21:40:16] 2025-10-12 04:39:34,018 | INFO     | ready for new job
[2025-10-11 21:40:16] 2025-10-12 04:39:34,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:40:16] 2025-10-12 04:39:34,051 | INFO     | ***************************************
[2025-10-11 21:40:16] 2025-10-12 04:39:34,051 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:40:16] 2025-10-12 04:39:34,051 | INFO     | ***************************************
[2025-10-11 21:40:16] 2025-10-12 04:39:34,051 | INFO     | 
[2025-10-11 21:40:16] 2025-10-12 04:39:34,076 | INFO     | architecture information:
[2025-10-11 21:40:16] 2025-10-12 04:39:34,089 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:40:16] 2025-10-12 04:39:34,117 | INFO     | cat /etc/os-release:
[2025-10-11 21:40:16] NAME="CentOS Linux"
[2025-10-11 21:40:16] VERSION="7 (Core)"
[2025-10-11 21:40:16] ID="centos"
[2025-10-11 21:40:16] ID_LIKE="rhel fedora"
[2025-10-11 21:40:16] VERSION_ID="7"
[2025-10-11 21:40:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:40:16] ANSI_COLOR="0;31"
[2025-10-11 21:40:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:40:16] HOME_URL="https://www.centos.org/"
[2025-10-11 21:40:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:40:16] 
[2025-10-11 21:40:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:40:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:40:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:40:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:40:16] 
[2025-10-11 21:40:16] 2025-10-12 04:39:34,122 | INFO     | ***************************************
[2025-10-11 21:40:16] 2025-10-12 04:39:34,626 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 21:40:16] 2025-10-12 04:39:34,654 | INFO     | sufficient remaining disk space (1816178720768 B)
[2025-10-11 21:40:16] 2025-10-12 04:39:34,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:40:16] 2025-10-12 04:39:34,654 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:40:16] 2025-10-12 04:39:34,654 | INFO     | update_server=False
[2025-10-11 21:40:16] 2025-10-12 04:39:34,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:40:16] 2025-10-12 04:39:34,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:40:16] 2025-10-12 04:39:34,923 | INFO     | all data control threads have been joined
[2025-10-11 21:40:16] 2025-10-12 04:39:34,998 | INFO     | all job control threads have been joined
[2025-10-11 21:40:16] 2025-10-12 04:39:35,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:40:16] 2025-10-12 04:39:35,427 | INFO     | aborting loop
[2025-10-11 21:40:16] 2025-10-12 04:39:35,661 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:35,850 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:35,936 | INFO     | [data] control thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:35,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:40:16] 2025-10-12 04:39:36,004 | INFO     | [job] control thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,152 | INFO     | all payload control threads have been joined
[2025-10-11 21:40:16] 2025-10-12 04:39:36,176 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:40:16] 2025-10-12 04:39:36,377 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,433 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,460 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,823 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,829 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:36,980 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:37,029 | INFO     | [job] validate thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:37,158 | INFO     | [payload] control thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:37,362 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:39:40,007 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:40:16] 2025-10-12 04:40:04,135 | INFO     | PID=474683 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:40:16] 2025-10-12 04:40:04,135 | INFO     | .. there are 41 such processes running
[2025-10-11 21:40:16] 2025-10-12 04:40:04,135 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:40:16] 2025-10-12 04:40:04,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:40:16] 2025-10-12 04:40:04,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:40:16] 2025-10-12 04:40:09,521 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:40:16] 2025-10-12 04:40:10,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761129232192)>', '<ExcThread(monitor, started 139760808990464)>']
[2025-10-11 21:40:16] 2025-10-12 04:40:11,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:40:16] 2025-10-12 04:40:11,179 | INFO     | [monitor] control thread has ended
[2025-10-11 21:40:16] 2025-10-12 04:40:15,651 | INFO     | all workflow threads have been joined
[2025-10-11 21:40:16] 2025-10-12 04:40:15,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:40:16] 2025-10-12 04:40:15,652 | INFO     | traces error code: 0
[2025-10-11 21:40:16] 2025-10-12 04:40:15,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:40:16] 2025-10-12 04:40:15,805 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:40:16] 2025-10-12 04:40:15,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:40:16] 2025-10-12 04:40:15,809 [wrapper] pilotpid: 474683
[2025-10-11 21:40:16] 2025-10-12 04:40:15,812 [wrapper] Pilot exit status: 0
[2025-10-11 21:40:16] 2025-10-12 04:40:15,873 [wrapper] pandaids: 6839316548
[2025-10-11 21:40:16] 2025-10-12 04:40:15,977 [wrapper] cleanup supervisor_pilot  474689 474684
[2025-10-11 21:40:16] 2025-10-12 04:40:16,001 [wrapper] Test setup, not cleaning
[2025-10-11 21:40:16] 2025-10-12 04:40:16,011 [wrapper] apfmon messages muted
[2025-10-11 21:40:16] 2025-10-12 04:40:16,050 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:40:16] 2025-10-12 04:40:16,074 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:40:16]  *** Error codes and diagnostics ***
[2025-10-11 21:40:16]     "exeErrorCode": 65,
[2025-10-11 21:40:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 21:40:16]     "pilotErrorCode": 1305,
[2025-10-11 21:40:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 21:40:16]  *** Listing of results directory ***
[2025-10-11 21:40:16] total 221784
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc    557409 Oct 11 18:53 pilot3.tar.gz
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc      5112 Oct 11 19:14 queuedata.json
[2025-10-11 21:40:16] -rwx------. 1 boinc boinc     36292 Oct 11 19:15 runpilot2-wrapper.sh
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc       100 Oct 11 21:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:40:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 21:34 run_atlas
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc       105 Oct 11 21:34 job.xml
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc      6594 Oct 11 21:34 init_data.xml
[2025-10-11 21:40:16] -rw-r--r--. 2 boinc boinc 222976656 Oct 11 21:34 EVNT.46676267._001106.pool.root.1
[2025-10-11 21:40:16] -rw-r--r--. 2 boinc boinc     15120 Oct 11 21:34 start_atlas.sh
[2025-10-11 21:40:16] drwxrwx--x. 2 boinc boinc      4096 Oct 11 21:34 shared
[2025-10-11 21:40:16] -rw-r--r--. 2 boinc boinc    569679 Oct 11 21:34 input.tar.gz
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc         0 Oct 11 21:34 boinc_lockfile
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc      2549 Oct 11 21:34 pandaJob.out
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc    975512 Oct 11 21:35 agis_schedconf.cvmfs.json
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc   1560580 Oct 11 21:35 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:40:16] drwx------. 5 boinc boinc      4096 Oct 11 21:35 pilot3
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc       963 Oct 11 21:37 memory_monitor_summary.json
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc     21846 Oct 11 21:37 log.46676269._069218.job.log.tgz.1
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc        95 Oct 11 21:39 pilot_heartbeat.json
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc      8392 Oct 11 21:39 heartbeat.json
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc       523 Oct 11 21:40 boinc_task_state.xml
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc        22 Oct 11 21:40 wrapper_checkpoint.txt
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc      8192 Oct 11 21:40 boinc_mmap_file
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc      4822 Oct 11 21:40 pilotlog.txt
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc     92638 Oct 11 21:40 log.46676269._069218.job.log.1
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc       188 Oct 11 21:40 output.list
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc       620 Oct 11 21:40 runtime_log
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc    133120 Oct 11 21:40 result.tar.gz
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc       644 Oct 11 21:40 S6nLDm7m0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzJiNDmUzvAUm.diag
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc      8528 Oct 11 21:40 runtime_log.err
[2025-10-11 21:40:16] -rw-r--r--. 1 boinc boinc     21816 Oct 11 21:40 stderr.txt
[2025-10-11 21:40:16] No HITS result produced
[2025-10-11 21:40:16]  *** Contents of shared directory: ***
[2025-10-11 21:40:16] total 218460
[2025-10-11 21:40:16] -rw-r--r--. 2 boinc boinc 222976656 Oct 11 21:34 ATLAS.root_0
[2025-10-11 21:40:16] -rw-r--r--. 2 boinc boinc     15120 Oct 11 21:34 start_atlas.sh
[2025-10-11 21:40:16] -rw-r--r--. 2 boinc boinc    569679 Oct 11 21:34 input.tar.gz
[2025-10-11 21:40:16] -rw-------. 1 boinc boinc    133120 Oct 11 21:40 result.tar.gz
21:40:17 (470849): run_atlas exited; CPU time 29.176756
21:40:17 (470849): called boinc_finish(0)

</stderr_txt>
]]>

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