Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 00:29:09 (28932): vboxwrapper version 26210
2025-10-12 00:29:09 (28932): BOINC client version: 7.24.1
2025-10-12 00:29:09 (28932): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-12 00:29:10 (28932): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 00:29:10 (28932): Create VM. (boinc_0586d27e6ec56684, slot#9)
2025-10-12 00:29:10 (28932): Setting Memory Size for VM. (4600MB)
2025-10-12 00:29:11 (28932): Setting CPU Count for VM. (6)
2025-10-12 00:29:11 (28932): Setting Chipset Options for VM.
2025-10-12 00:29:11 (28932): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 00:29:12 (28932): Setting Boot Options for VM.
2025-10-12 00:29:12 (28932): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 00:29:12 (28932): Enabling VM Network Access.
2025-10-12 00:29:13 (28932): Disabling USB Support for VM.
2025-10-12 00:29:13 (28932): Disabling COM Port Support for VM.
2025-10-12 00:29:13 (28932): Disabling LPT Port Support for VM.
2025-10-12 00:29:13 (28932): Disabling Audio Support for VM.
2025-10-12 00:29:14 (28932): Disabling Clipboard Support for VM.
2025-10-12 00:29:14 (28932): Disabling Drag and Drop Support for VM.
2025-10-12 00:29:14 (28932): Adding storage controller(s) to VM.
2025-10-12 00:29:14 (28932): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 00:29:17 (28932): Adding VirtualBox Guest Additions to VM.
2025-10-12 00:29:17 (28932): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 00:29:17 (28932): forwarding host port 19352 to guest port 80
2025-10-12 00:29:17 (28932): Enabling remote desktop for VM.
2025-10-12 00:29:18 (28932): Enabling shared directory for VM.
2025-10-12 00:29:19 (28932): Starting VM using VBoxManage interface. (boinc_0586d27e6ec56684, slot#9)
2025-10-12 00:29:25 (28932): Successfully started VM. (PID = '15032')
2025-10-12 00:29:25 (28932): Reporting VM Process ID to BOINC.
2025-10-12 00:29:25 (28932): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-12 00:29:25 (28932): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 00:29:25 (28932): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 00:29:25 (28932): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 00:29:25 (28932): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 00:29:25 (28932): Detected: Web Application Enabled (http://localhost:19352)
2025-10-12 00:29:25 (28932): Detected: Remote Desktop Enabled (localhost:19353)
2025-10-12 00:29:25 (28932): Preference change detected
2025-10-12 00:29:25 (28932): Setting CPU throttle for VM. (90%)
2025-10-12 00:29:25 (28932): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 00:29:27 (28932): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 00:29:27 (28932): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 00:29:30 (28932): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 00:29:30 (28932): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 00:29:30 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 00:29:32 (28932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 00:29:42 (28932): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 00:29:42 (28932): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 00:29:54 (28932): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000144 main     Log opened 2025-10-12T00:29:50.853401000Z
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000247 main     OS Product: Linux
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000288 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000332 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000372 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000373 main     Process ID: 1348
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.000374 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 00:29:54 (28932): Guest Log: 00:00:00.001061 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 00:29:54 (28932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 00:29:54 (28932): Guest Log: [INFO] Mounting shared directory
2025-10-12 00:29:54 (28932): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 00:30:02 (28932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 00:30:02 (28932): Guest Log: [INFO] Detected branch: prod
2025-10-12 00:30:02 (28932): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 00:30:02 (28932): Guest Log: Copying input files
2025-10-12 00:30:04 (28932): Guest Log: 00:00:10.002736 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 740 423 000ns (GuestNow=1 760 243 402 596 186 000 ns GuestLast=1 760 228 990 855 763 000 ns fSetTimeLastLoop=true )
2025-10-12 00:30:06 (28932): Guest Log: Copied input files into RunAtlas.
2025-10-12 00:30:06 (28932): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 00:30:06 (28932): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 00:30:06 (28932): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 00:30:06 (28932): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 00:30:16 (28932): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 00:30:18 (28932): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 00:30:18 (28932): Guest Log: 2.6.3.0 1631 0 30164 151608 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 00:30:20 (28932): Guest Log: copied the webapp to /var/www
2025-10-12 00:30:20 (28932): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-12 00:30:20 (28932): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-12 00:30:20 (28932): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 00:30:20 (28932): Guest Log:  *** Starting ATLAS job. (PandaID=6839162570 taskID=46676269) ***
2025-10-12 02:44:37 (28932): Status Report: Elapsed Time: '6000.000000'
2025-10-12 02:44:37 (28932): Status Report: CPU Time: '20855.296875'
2025-10-12 03:41:08 (28932): Guest Log:  *** Job finished ***
2025-10-12 03:41:08 (28932): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:40:57,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:40:57,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:40:58,032 | INFO     | [monitor] cgroup control has ended
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:00,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069753173824)>', '<ExcThread(monitor, started 140068991780608)>']
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:00,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:00,834 | INFO     | [monitor] control thread has ended
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,095 | INFO     | all workflow threads have been joined
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,095 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,095 | INFO     | traces error code: 0
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,163 [wrapper] ==== pilot stdout END ====
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,167 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,171 [wrapper] pilotpid: 6053
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,175 [wrapper] Pilot exit status: 0
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,234 [wrapper] pandaids: 6839162570
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,761 [wrapper] cleanup supervisor_pilot  8595 6054
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,767 [wrapper] Test setup, not cleaning
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,771 [wrapper] apfmon messages muted
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,774 [wrapper] ==== wrapper stdout END ====
2025-10-12 03:41:08 (28932): Guest Log: 2025-10-12 07:41:05,777 [wrapper] ==== wrapper stderr END ====
2025-10-12 03:41:08 (28932): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 03:41:08 (28932): Guest Log:     "exeErrorCode": 0,
2025-10-12 03:41:08 (28932): Guest Log:     "exeErrorDiag": "",
2025-10-12 03:41:08 (28932): Guest Log:     "pilotErrorCode": 0,
2025-10-12 03:41:08 (28932): Guest Log:     "pilotErrorDiag": "",
2025-10-12 03:41:08 (28932): Guest Log:  *** Listing of results directory ***
2025-10-12 03:41:08 (28932): Guest Log: total 201440
2025-10-12 03:41:08 (28932): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 23:21 pilot3.tar.gz
2025-10-12 03:41:08 (28932): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 23:23 queuedata.json
2025-10-12 03:41:08 (28932): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 23:23 runpilot2-wrapper.sh
2025-10-12 03:41:08 (28932): Guest Log: -rwxr-xr-x. 1 atlas atlas      9206 Oct 12 04:30 init_data.xml
2025-10-12 03:41:08 (28932): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 12 04:30 input.tar.gz
2025-10-12 03:41:08 (28932): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 04:30 start_atlas.sh
2025-10-12 03:41:08 (28932): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 04:30 EVNT.46676267._002709.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 03:41:08 (28932): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 12 04:30 pandaJob.out
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas    975512 Oct 12 04:31 agis_schedconf.cvmfs.json
2025-10-12 03:41:08 (28932): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 04:31 pilot3
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas 199011794 Oct 12 07:39 HITS.46676269._066993.pool.root.1
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas      1034 Oct 12 07:39 memory_monitor_summary.json
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 07:40 agis_ddmendpoints.agis.ALL.json
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas    379725 Oct 12 07:40 log.46676269._066993.job.log.tgz.1
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas      7815 Oct 12 07:40 heartbeat.json
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 07:40 pilot_heartbeat.json
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 12 07:41 pilotlog.txt
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas   1335510 Oct 12 07:41 log.46676269._066993.job.log.1
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 07:41 output.list
2025-10-12 03:41:08 (28932): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 07:41 runtime_log
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas   1730560 Oct 12 07:41 result.tar.gz
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas       659 Oct 12 07:41 wjGMDmS7xR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMxhNDmtk6hXm.diag
2025-10-12 03:41:08 (28932): Guest Log: -rw-r--r--. 1 atlas atlas      8639 Oct 12 07:41 runtime_log.err
2025-10-12 03:41:08 (28932): Guest Log: Looking for outputfile HITS.46676269._066993.pool.root.1
2025-10-12 03:41:08 (28932): Guest Log: HITS file was successfully produced
2025-10-12 03:41:08 (28932): Guest Log: -rw-------. 1 atlas atlas 199011794 Oct 12 07:39 /home/atlas/RunAtlas/HITS.46676269._066993.pool.root.1
2025-10-12 03:41:10 (28932): Guest Log: Successfully finished the ATLAS job!
2025-10-12 03:41:10 (28932): Guest Log: Copying the results back to the shared directory!
2025-10-12 03:41:10 (28932): Guest Log:  *** Contents of shared directory: ***
2025-10-12 03:41:10 (28932): Guest Log: total 409644
2025-10-12 03:41:10 (28932): Guest Log: -rwxrwxrwx. 1 root root 218127267 Oct 12 04:29 ATLAS.root_0
2025-10-12 03:41:10 (28932): Guest Log: -rwxrwxrwx. 1 root root 199011794 Oct 12 07:41 HITS.pool.root.1
2025-10-12 03:41:10 (28932): Guest Log: -rwxrwxrwx. 1 root root      9206 Oct 12 04:29 init_data.xml
2025-10-12 03:41:10 (28932): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 12 04:23 input.tar.gz
2025-10-12 03:41:10 (28932): Guest Log: -rwxrwxrwx. 1 root root   1730560 Oct 12  2025 result.tar.gz
2025-10-12 03:41:10 (28932): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 04:23 start_atlas.sh
2025-10-12 03:41:10 (28932): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 03:41:10 (28932): VM Completion File Detected.
2025-10-12 03:41:10 (28932): Powering off VM.
2025-10-12 03:41:11 (28932): Successfully stopped VM.
2025-10-12 03:41:11 (28932): Deregistering VM. (boinc_0586d27e6ec56684, slot#9)
2025-10-12 03:41:11 (28932): Removing network bandwidth throttle group from VM.
2025-10-12 03:41:12 (28932): Removing VM from VirtualBox.
2025-10-12 03:41:22 (28932): called boinc_finish(0)

</stderr_txt>
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