Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:01:16 (2581970): wrapper (7.7.26015): starting
21:01:16 (2581970): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:01:16] Arguments: --nthreads 3
[2025-10-12 21:01:16] Threads: 3
[2025-10-12 21:01:16] Checking for CVMFS
[2025-10-12 21:01:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:01:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:01:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:01:16] 2.9.2.0 1182477 4820 83028 151633 3 57 3778566 36864000 0 130560 0 3684579 99.991 166579 926 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:01:16] CVMFS is ok
[2025-10-12 21:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:01:16] Further information can be found at the LHC@home message board.
[2025-10-12 21:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:01:16] Checking for apptainer binary...
[2025-10-12 21:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:01:16] Running /usr/bin/apptainer --version
[2025-10-12 21:01:16] apptainer version 1.4.1-1.1
[2025-10-12 21:01:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:01:16] thA332
[2025-10-12 21:01:16] apptainer works
[2025-10-12 21:01:16] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:01:16] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:01:16] Starting ATLAS job with PandaID=6838852968
[2025-10-12 21:01:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:28:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:28:52] NAME="CentOS Linux"
[2025-10-12 22:28:52] VERSION="7 (Core)"
[2025-10-12 22:28:52] ID="centos"
[2025-10-12 22:28:52] ID_LIKE="rhel fedora"
[2025-10-12 22:28:52] VERSION_ID="7"
[2025-10-12 22:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:28:52] ANSI_COLOR="0;31"
[2025-10-12 22:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:28:52] HOME_URL="https://www.centos.org/"
[2025-10-12 22:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:28:52] 
[2025-10-12 22:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:28:52] 
[2025-10-12 22:28:52] 2025-10-12 20:28:21,020 | INFO     | ***************************************
[2025-10-12 22:28:52] 2025-10-12 20:28:21,523 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 22:28:52] 2025-10-12 20:28:21,536 | INFO     | sufficient remaining disk space (255706791936 B)
[2025-10-12 22:28:52] 2025-10-12 20:28:21,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:28:52] 2025-10-12 20:28:21,536 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:28:52] 2025-10-12 20:28:21,536 | INFO     | update_server=False
[2025-10-12 22:28:52] 2025-10-12 20:28:21,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:28:52] 2025-10-12 20:28:21,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:28:52] 2025-10-12 20:28:21,854 | INFO     | all payload control threads have been joined
[2025-10-12 22:28:52] 2025-10-12 20:28:22,071 | INFO     | all data control threads have been joined
[2025-10-12 22:28:52] 2025-10-12 20:28:22,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:28:52] 2025-10-12 20:28:22,113 | INFO     | aborting loop
[2025-10-12 22:28:52] 2025-10-12 20:28:22,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:28:52] 2025-10-12 20:28:22,537 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:22,541 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:22,687 | INFO     | all job control threads have been joined
[2025-10-12 22:28:52] 2025-10-12 20:28:22,729 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:22,860 | INFO     | [payload] control thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:22,915 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,077 | INFO     | [data] control thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,118 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,301 | INFO     | [job] validate thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,354 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,359 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,658 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:23,693 | INFO     | [job] control thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:24,052 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:24,214 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:24,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:28:52] 2025-10-12 20:28:27,641 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:28:52] 2025-10-12 20:28:28,741 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:32,297 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:28:52] 2025-10-12 20:28:33,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:28:52] 2025-10-12 20:28:34,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898565797696)>', '<ExcThread(monitor, started 139897914500864)>']
[2025-10-12 22:28:52] 2025-10-12 20:28:39,996 | INFO     | all workflow threads have been joined
[2025-10-12 22:28:52] 2025-10-12 20:28:39,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:28:52] 2025-10-12 20:28:39,997 | INFO     | traces error code: 0
[2025-10-12 22:28:52] 2025-10-12 20:28:39,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | INFO     | PID=2585686 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:28:52] 2025-10-12 20:28:52,501 | INFO     | [monitor] control thread has ended
[2025-10-12 22:28:52] 2025-10-12 20:28:52,548 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:28:52] 2025-10-12 20:28:52,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:28:52] 2025-10-12 20:28:52,552 [wrapper] pilotpid: 2585686
[2025-10-12 22:28:52] 2025-10-12 20:28:52,555 [wrapper] Pilot exit status: 0
[2025-10-12 22:28:52] 2025-10-12 20:28:52,562 [wrapper] pandaids: 6838852968
[2025-10-12 22:28:52] 2025-10-12 20:28:52,577 [wrapper] cleanup supervisor_pilot 2604063 2585687
[2025-10-12 22:28:52] 2025-10-12 20:28:52,580 [wrapper] Test setup, not cleaning
[2025-10-12 22:28:52] 2025-10-12 20:28:52,582 [wrapper] apfmon messages muted
[2025-10-12 22:28:52] 2025-10-12 20:28:52,584 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:28:52] 2025-10-12 20:28:52,587 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:28:52]  *** Error codes and diagnostics ***
[2025-10-12 22:28:52]     "exeErrorCode": 0,
[2025-10-12 22:28:52]     "exeErrorDiag": "",
[2025-10-12 22:28:52]     "pilotErrorCode": 0,
[2025-10-12 22:28:52]     "pilotErrorDiag": "",
[2025-10-12 22:28:52]  *** Listing of results directory ***
[2025-10-12 22:28:52] total 415104
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:36 pilot3.tar.gz
[2025-10-12 22:28:52] -rwx------ 1 boinc boinc     36292 Oct 11 22:45 runpilot2-wrapper.sh
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:45 queuedata.json
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:28:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:01 run_atlas
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:01 job.xml
[2025-10-12 22:28:52] -rw-r--r-- 2 boinc boinc 222366918 Oct 12 21:01 EVNT.46676267._002597.pool.root.1
[2025-10-12 22:28:52] -rw-r--r-- 2 boinc boinc    569680 Oct 12 21:01 input.tar.gz
[2025-10-12 22:28:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:01 start_atlas.sh
[2025-10-12 22:28:52] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:01 shared
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:01 boinc_setup_complete
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc      6437 Oct 12 21:01 init_data.xml
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:01 boinc_lockfile
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc      2550 Oct 12 21:01 pandaJob.out
[2025-10-12 22:28:52] -rw------- 1 boinc boinc    975528 Oct 12 21:01 agis_schedconf.cvmfs.json
[2025-10-12 22:28:52] -rw------- 1 boinc boinc   1560580 Oct 12 21:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:28:52] drwx------ 5 boinc boinc      4096 Oct 12 21:01 pilot3
[2025-10-12 22:28:52] -rw------- 1 boinc boinc 196742001 Oct 12 22:27 HITS.46676269._064604.pool.root.1
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc       530 Oct 12 22:27 boinc_task_state.xml
[2025-10-12 22:28:52] -rw------- 1 boinc boinc      1021 Oct 12 22:28 memory_monitor_summary.json
[2025-10-12 22:28:52] -rw------- 1 boinc boinc    269842 Oct 12 22:28 log.46676269._064604.job.log.tgz.1
[2025-10-12 22:28:52] -rw------- 1 boinc boinc      7761 Oct 12 22:28 heartbeat.json
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:28 wrapper_checkpoint.txt
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:28 boinc_mmap_file
[2025-10-12 22:28:52] -rw------- 1 boinc boinc       817 Oct 12 22:28 pilotlog.txt
[2025-10-12 22:28:52] -rw------- 1 boinc boinc        95 Oct 12 22:28 pilot_heartbeat.json
[2025-10-12 22:28:52] -rw------- 1 boinc boinc    763561 Oct 12 22:28 log.46676269._064604.job.log.1
[2025-10-12 22:28:52] -rw------- 1 boinc boinc       357 Oct 12 22:28 output.list
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:28 runtime_log
[2025-10-12 22:28:52] -rw------- 1 boinc boinc   1054720 Oct 12 22:28 result.tar.gz
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc      8777 Oct 12 22:28 runtime_log.err
[2025-10-12 22:28:52] -rw------- 1 boinc boinc       658 Oct 12 22:28 QeULDm6dvR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2YSMDm90uuxn.diag
[2025-10-12 22:28:52] -rw-r--r-- 1 boinc boinc      8891 Oct 12 22:28 stderr.txt
[2025-10-12 22:28:52] HITS file was successfully produced:
[2025-10-12 22:28:52] -rw------- 1 boinc boinc 196742001 Oct 12 22:27 shared/HITS.pool.root.1
[2025-10-12 22:28:52]  *** Contents of shared directory: ***
[2025-10-12 22:28:52] total 410904
[2025-10-12 22:28:52] -rw-r--r-- 2 boinc boinc 222366918 Oct 12 21:01 ATLAS.root_0
[2025-10-12 22:28:52] -rw-r--r-- 2 boinc boinc    569680 Oct 12 21:01 input.tar.gz
[2025-10-12 22:28:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:01 start_atlas.sh
[2025-10-12 22:28:52] -rw------- 1 boinc boinc 196742001 Oct 12 22:27 HITS.pool.root.1
[2025-10-12 22:28:52] -rw------- 1 boinc boinc   1054720 Oct 12 22:28 result.tar.gz
22:28:54 (2581970): run_atlas exited; CPU time 15012.804448
22:28:54 (2581970): called boinc_finish(0)

</stderr_txt>
]]>

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