Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:53:49 (2263224): wrapper (7.7.26015): starting
15:53:49 (2263224): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 15:53:49] Arguments: --nthreads 2
[2025-10-12 15:53:49] Threads: 2
[2025-10-12 15:53:49] Checking for CVMFS
[2025-10-12 15:53:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:53:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:53:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:53:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:53:49] 2.9.2.0 1264658 4378 63204 151621 1 57 27357643 36864000 0 130560 0 2632311 99.988 150339 888 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 15:53:49] CVMFS is ok
[2025-10-12 15:53:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:53:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:53:49] Further information can be found at the LHC@home message board.
[2025-10-12 15:53:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:53:49] Checking for apptainer binary...
[2025-10-12 15:53:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:53:49] Running /usr/bin/apptainer --version
[2025-10-12 15:53:50] apptainer version 1.4.1-1.1
[2025-10-12 15:53:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:53:50] magicA252b
[2025-10-12 15:53:50] apptainer works
[2025-10-12 15:53:50] Set ATHENA_PROC_NUMBER=2
[2025-10-12 15:53:50] Set ATHENA_CORE_NUMBER=2
[2025-10-12 15:53:50] Starting ATLAS job with PandaID=6839083872
[2025-10-12 15:53:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:59:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:59:20] VERSION_ID="7"
[2025-10-12 17:59:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:59:20] ANSI_COLOR="0;31"
[2025-10-12 17:59:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:59:20] HOME_URL="https://www.centos.org/"
[2025-10-12 17:59:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:59:20] 
[2025-10-12 17:59:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:59:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:59:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:59:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:59:20] 
[2025-10-12 17:59:20] 2025-10-12 15:58:58,849 | INFO     | ***************************************
[2025-10-12 17:59:20] 2025-10-12 15:58:59,352 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | INFO     | sufficient remaining disk space (333158809600 B)
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | INFO     | update_server=False
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:59:20] 2025-10-12 15:58:59,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:59:20] 2025-10-12 15:58:59,384 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:59:20] 2025-10-12 15:58:59,385 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:59:20] 2025-10-12 15:58:59,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:59:20] 2025-10-12 15:58:59,385 | INFO     | will abort loop
[2025-10-12 17:59:20] 2025-10-12 15:58:59,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:59:20] 2025-10-12 15:58:59,969 | INFO     | all job control threads have been joined
[2025-10-12 17:59:20] 2025-10-12 15:58:59,996 | INFO     | all data control threads have been joined
[2025-10-12 17:59:20] 2025-10-12 15:59:00,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:59:20] 2025-10-12 15:59:00,370 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:00,371 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:00,380 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:00,389 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:00,536 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:00,557 | INFO     | all payload control threads have been joined
[2025-10-12 17:59:20] 2025-10-12 15:59:00,974 | INFO     | [job] control thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,002 | INFO     | [data] control thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,203 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,409 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,559 | INFO     | [payload] control thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,669 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,670 | INFO     | [job] validate thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:01,768 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:02,364 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:03,419 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:09,817 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:59:20] 2025-10-12 15:59:10,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:59:20] 2025-10-12 15:59:14,089 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:59:20] 2025-10-12 15:59:15,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585866188608)>', '<ExcThread(monitor, started 140585134446336)>']
[2025-10-12 17:59:20] 2025-10-12 15:59:15,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:59:20] 2025-10-12 15:59:15,437 | INFO     | [monitor] control thread has ended
[2025-10-12 17:59:20] 2025-10-12 15:59:20,383 | INFO     | all workflow threads have been joined
[2025-10-12 17:59:20] 2025-10-12 15:59:20,384 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:59:20] 2025-10-12 15:59:20,384 | INFO     | traces error code: 0
[2025-10-12 17:59:20] 2025-10-12 15:59:20,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:59:20] 2025-10-12 15:59:20,426 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:59:20] 2025-10-12 15:59:20,429 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:59:20] 2025-10-12 15:59:20,431 [wrapper] pilotpid: 2266926
[2025-10-12 17:59:20] 2025-10-12 15:59:20,434 [wrapper] Pilot exit status: 0
[2025-10-12 17:59:20] 2025-10-12 15:59:20,439 [wrapper] pandaids: 6839083872
[2025-10-12 17:59:20] 2025-10-12 15:59:20,452 [wrapper] cleanup supervisor_pilot 2288197 2266927
[2025-10-12 17:59:20] 2025-10-12 15:59:20,454 [wrapper] Test setup, not cleaning
[2025-10-12 17:59:20] 2025-10-12 15:59:20,456 [wrapper] apfmon messages muted
[2025-10-12 17:59:20] 2025-10-12 15:59:20,457 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:59:20] 2025-10-12 15:59:20,459 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:59:20]  *** Error codes and diagnostics ***
[2025-10-12 17:59:20]     "exeErrorCode": 0,
[2025-10-12 17:59:20]     "exeErrorDiag": "",
[2025-10-12 17:59:20]     "pilotErrorCode": 0,
[2025-10-12 17:59:20]     "pilotErrorDiag": "",
[2025-10-12 17:59:20]  *** Listing of results directory ***
[2025-10-12 17:59:20] total 410804
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:51 pilot3.tar.gz
[2025-10-12 17:59:20] -rwx------ 1 boinc boinc     36292 Oct 12 01:02 runpilot2-wrapper.sh
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:02 queuedata.json
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:59:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:53 run_atlas
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:53 job.xml
[2025-10-12 17:59:20] -rw-r--r-- 2 boinc boinc 220641972 Oct 12 15:53 EVNT.46676267._002687.pool.root.1
[2025-10-12 17:59:20] -rw-r--r-- 2 boinc boinc    569682 Oct 12 15:53 input.tar.gz
[2025-10-12 17:59:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:53 start_atlas.sh
[2025-10-12 17:59:20] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:53 shared
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:53 boinc_setup_complete
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc      6209 Oct 12 15:53 init_data.xml
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:53 boinc_lockfile
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc      2547 Oct 12 15:53 pandaJob.out
[2025-10-12 17:59:20] -rw------- 1 boinc boinc    975528 Oct 12 15:54 agis_schedconf.cvmfs.json
[2025-10-12 17:59:20] -rw------- 1 boinc boinc   1560580 Oct 12 15:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:59:20] drwx------ 5 boinc boinc      4096 Oct 12 15:54 pilot3
[2025-10-12 17:59:20] -rw------- 1 boinc boinc 193438732 Oct 12 17:58 HITS.46676269._066636.pool.root.1
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc       529 Oct 12 17:58 boinc_task_state.xml
[2025-10-12 17:59:20] -rw------- 1 boinc boinc        95 Oct 12 17:58 pilot_heartbeat.json
[2025-10-12 17:59:20] -rw------- 1 boinc boinc      1019 Oct 12 17:58 memory_monitor_summary.json
[2025-10-12 17:59:20] -rw------- 1 boinc boinc    260067 Oct 12 17:58 log.46676269._066636.job.log.tgz.1
[2025-10-12 17:59:20] -rw------- 1 boinc boinc      7754 Oct 12 17:58 heartbeat.json
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc      8192 Oct 12 17:59 boinc_mmap_file
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc        27 Oct 12 17:59 wrapper_checkpoint.txt
[2025-10-12 17:59:20] -rw------- 1 boinc boinc      4814 Oct 12 17:59 pilotlog.txt
[2025-10-12 17:59:20] -rw------- 1 boinc boinc   1082670 Oct 12 17:59 log.46676269._066636.job.log.1
[2025-10-12 17:59:20] -rw------- 1 boinc boinc       357 Oct 12 17:59 output.list
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc       620 Oct 12 17:59 runtime_log
[2025-10-12 17:59:20] -rw------- 1 boinc boinc   1361920 Oct 12 17:59 result.tar.gz
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc      8797 Oct 12 17:59 runtime_log.err
[2025-10-12 17:59:20] -rw------- 1 boinc boinc       663 Oct 12 17:59 11EMDmCnxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvthNDmhxTpHo.diag
[2025-10-12 17:59:20] -rw-r--r-- 1 boinc boinc      8795 Oct 12 17:59 stderr.txt
[2025-10-12 17:59:20] HITS file was successfully produced:
[2025-10-12 17:59:20] -rw------- 1 boinc boinc 193438732 Oct 12 17:58 shared/HITS.pool.root.1
[2025-10-12 17:59:20]  *** Contents of shared directory: ***
[2025-10-12 17:59:20] total 406296
[2025-10-12 17:59:20] -rw-r--r-- 2 boinc boinc 220641972 Oct 12 15:53 ATLAS.root_0
[2025-10-12 17:59:20] -rw-r--r-- 2 boinc boinc    569682 Oct 12 15:53 input.tar.gz
[2025-10-12 17:59:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:53 start_atlas.sh
[2025-10-12 17:59:20] -rw------- 1 boinc boinc 193438732 Oct 12 17:58 HITS.pool.root.1
[2025-10-12 17:59:20] -rw------- 1 boinc boinc   1361920 Oct 12 17:59 result.tar.gz
17:59:21 (2263224): run_atlas exited; CPU time 14535.854527
17:59:21 (2263224): called boinc_finish(0)

</stderr_txt>
]]>

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