Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:02:09 (377786): wrapper (7.7.26015): starting
04:02:09 (377786): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:02:09] Arguments: --nthreads 8
[2025-10-12 04:02:09] Threads: 8
[2025-10-12 04:02:09] Checking for CVMFS
[2025-10-12 04:02:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:02:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:02:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:02:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:02:10] 2.13.2.0 5034 5413 147252 151612 0 473 26352173 40960000 30066 16776704 0 20951919 99.706 14600127 33138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 04:02:10] CVMFS is ok
[2025-10-12 04:02:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:02:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:02:10] Further information can be found at the LHC@home message board.
[2025-10-12 04:02:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:02:10] Checking for apptainer binary...
[2025-10-12 04:02:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:02:10] Running /usr/bin/apptainer --version
[2025-10-12 04:02:10] apptainer version 1.4.3-1.el9
[2025-10-12 04:02:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:02:11] c-212-9.aglt2.org
[2025-10-12 04:02:11] apptainer works
[2025-10-12 04:02:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:02:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:02:11] Starting ATLAS job with PandaID=6838990999
[2025-10-12 04:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:27:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:27:50] 2025-10-12 10:26:52,317 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:27:50] 2025-10-12 10:26:52,318 | INFO     | sum of square deviations: 887804529.1549318
[2025-10-12 06:27:50] 2025-10-12 10:26:52,357 | INFO     | sum of deviations: 19226423695.352108
[2025-10-12 06:27:50] 2025-10-12 10:26:52,357 | INFO     | mean x: 1760260486.5492957
[2025-10-12 06:27:50] 2025-10-12 10:26:52,357 | INFO     | mean y: 2440536.5211267606
[2025-10-12 06:27:50] 2025-10-12 10:26:52,357 | INFO     | -- intersect: -38118015957.2048
[2025-10-12 06:27:50] 2025-10-12 10:26:52,357 | INFO     | intersect: -38118015957.2048
[2025-10-12 06:27:50] 2025-10-12 10:26:52,357 | INFO     | chi2: 2.6414046551283468
[2025-10-12 06:27:50] 2025-10-12 10:26:52,358 | INFO     | sum of square deviations: 797284036.6423341
[2025-10-12 06:27:50] 2025-10-12 10:26:52,358 | INFO     | sum of deviations: 26949619709.70073
[2025-10-12 06:27:50] 2025-10-12 10:26:52,358 | INFO     | mean x: 1760260334.051095
[2025-10-12 06:27:50] 2025-10-12 10:26:52,358 | INFO     | mean y: 2453122.3284671535
[2025-10-12 06:27:50] 2025-10-12 10:26:52,359 | INFO     | -- intersect: -59497479665.14922
[2025-10-12 06:27:50] 2025-10-12 10:26:52,359 | INFO     | intersect: -59497479665.14922
[2025-10-12 06:27:50] 2025-10-12 10:26:52,359 | INFO     | chi2: 1.9680999896967712
[2025-10-12 06:27:50] 2025-10-12 10:26:52,359 | INFO     | current chi2=1.9680999896967712 (change=25.490402014865055 %)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,359 | INFO     | sum of square deviations: 713135756.628787
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | sum of deviations: 25709070600.219715
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | mean x: 1760260181.5530303
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | mean y: 2450875.3257575757
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | -- intersect: -63456228431.73234
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | intersect: -63456228431.73234
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | chi2: 1.9710479304357995
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | current chi2=1.9710479304357995 (change=-0.1497861264397679 %)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,360 | INFO     | right removable region: 131
[2025-10-12 06:27:50] 2025-10-12 10:26:52,361 | INFO     | sum of square deviations: 797279766.6423341
[2025-10-12 06:27:50] 2025-10-12 10:26:52,361 | INFO     | sum of deviations: -7007038354.445255
[2025-10-12 06:27:50] 2025-10-12 10:26:52,361 | INFO     | mean x: 1760260639.051095
[2025-10-12 06:27:50] 2025-10-12 10:26:52,361 | INFO     | mean y: 2484185.6350364964
[2025-10-12 06:27:50] 2025-10-12 10:26:52,362 | INFO     | -- intersect: 15472855224.39308
[2025-10-12 06:27:50] 2025-10-12 10:26:52,362 | INFO     | intersect: 15472855224.39308
[2025-10-12 06:27:50] 2025-10-12 10:26:52,362 | INFO     | chi2: 0.8291650003793579
[2025-10-12 06:27:50] 2025-10-12 10:26:52,362 | INFO     | current chi2=0.8291650003793579 (change=68.60893696202453 %)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,362 | INFO     | sum of square deviations: 713127216.628787
[2025-10-12 06:27:50] 2025-10-12 10:26:52,363 | INFO     | sum of deviations: -10174402154.151514
[2025-10-12 06:27:50] 2025-10-12 10:26:52,363 | INFO     | mean x: 1760260791.5530303
[2025-10-12 06:27:50] 2025-10-12 10:26:52,363 | INFO     | mean y: 2489803.878787879
[2025-10-12 06:27:50] 2025-10-12 10:26:52,365 | INFO     | -- intersect: 25116664065.95622
[2025-10-12 06:27:50] 2025-10-12 10:26:52,366 | INFO     | intersect: 25116664065.95622
[2025-10-12 06:27:50] 2025-10-12 10:26:52,366 | INFO     | chi2: 0.7844801279684064
[2025-10-12 06:27:50] 2025-10-12 10:26:52,366 | INFO     | current chi2=0.7844801279684064 (change=5.389141170998221 %)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,366 | INFO     | left removable region: 20
[2025-10-12 06:27:50] 2025-10-12 10:26:52,367 | INFO     | sum of square deviations: 424031990.55855894
[2025-10-12 06:27:50] 2025-10-12 10:26:52,367 | INFO     | sum of deviations: 2840182307.8648643
[2025-10-12 06:27:50] 2025-10-12 10:26:52,367 | INFO     | mean x: 1760260761.0630631
[2025-10-12 06:27:50] 2025-10-12 10:26:52,367 | INFO     | mean y: 2493249.1621621624
[2025-10-12 06:27:50] 2025-10-12 10:26:52,367 | INFO     | -- intersect: -11787799894.085072
[2025-10-12 06:27:50] 2025-10-12 10:26:52,367 | INFO     | intersect: -11787799894.085072
[2025-10-12 06:27:50] 2025-10-12 10:26:52,368 | INFO     | chi2: 0.0009893898327468901
[2025-10-12 06:27:50] 2025-10-12 10:26:52,368 | INFO     | -- intersect: -11787799894.085072
[2025-10-12 06:27:50] 2025-10-12 10:26:52,368 | INFO     | current memory leak: 6.70 B/s (using 111 data points, chi2=0.00)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,368 | INFO     | could have reported an average CPU frequency of 2945 MHz (8 samples)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | ..............................
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . Timing measurements:
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . get job = 0 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . initial setup = 3 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . payload setup = 11 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . stage-in = 0 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . payload execution = 8618 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . stage-out = 0 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | . log creation = 0 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,369 | INFO     | ..............................
[2025-10-12 06:27:50] 2025-10-12 10:26:52,472 | INFO     | 
[2025-10-12 06:27:50] 2025-10-12 10:26:52,472 | INFO     | job summary report
[2025-10-12 06:27:50] 2025-10-12 10:26:52,472 | INFO     | --------------------------------------------------
[2025-10-12 06:27:50] 2025-10-12 10:26:52,472 | INFO     | PanDA job id: 6838990999
[2025-10-12 06:27:50] 2025-10-12 10:26:52,472 | INFO     | task id: 46676269
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | errors: (none)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | pilot state: finished 
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | transexitcode: 0
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | exeerrorcode: 0
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | exeerrordiag: 
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | exitcode: 0
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | exitmsg: OK
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | cpuconsumptiontime: 34315 s
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | nevents: 400
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | neventsw: 0
[2025-10-12 06:27:50] 2025-10-12 10:26:52,473 | INFO     | pid: 391329
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | pgrp: 391329
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | corecount: 8
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | event service: False
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | sizes: {0: 2348857, 8: 2349119, 11: 2349147, 8633: 2377057, 8634: 2386055, 8636: 2386111, 8645: 2386433}
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | --------------------------------------------------
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | 
[2025-10-12 06:27:50] 2025-10-12 10:26:52,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 06:27:50] 2025-10-12 10:26:52,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:27:50] 2025-10-12 10:26:52,551 | INFO     | job 6838990999 has completed (purged errors)
[2025-10-12 06:27:50] 2025-10-12 10:26:52,551 | INFO     | overall cleanup function is called
[2025-10-12 06:27:50] 2025-10-12 10:26:53,559 | INFO     | --- collectZombieJob: --- 10, [391329]
[2025-10-12 06:27:50] 2025-10-12 10:26:53,560 | INFO     | zombie collector waiting for pid 391329
[2025-10-12 06:27:50] 2025-10-12 10:26:53,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:27:50] 2025-10-12 10:26:53,560 | INFO     | collected zombie processes
[2025-10-12 06:27:50] 2025-10-12 10:26:53,560 | INFO     | will attempt to kill all subprocesses of pid=391329
[2025-10-12 06:27:50] 2025-10-12 10:26:53,998 | INFO     | process IDs to be killed: [391329] (in reverse order)
[2025-10-12 06:27:50] 2025-10-12 10:26:54,182 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:27:50] 2025-10-12 10:26:54,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:27:50] 2025-10-12 10:26:54,201 | INFO     | did not find any defunct processes belonging to 391329
[2025-10-12 06:27:50] 2025-10-12 10:26:54,221 | INFO     | did not find any defunct processes belonging to 391329
[2025-10-12 06:27:50] 2025-10-12 10:26:54,221 | INFO     | ready for new job
[2025-10-12 06:27:50] 2025-10-12 10:26:54,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:27:50] 2025-10-12 10:26:54,223 | INFO     | ***************************************
[2025-10-12 06:27:50] 2025-10-12 10:26:54,223 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:27:50] 2025-10-12 10:26:54,224 | INFO     | ***************************************
[2025-10-12 06:27:50] 2025-10-12 10:26:54,224 | INFO     | 
[2025-10-12 06:27:50] 2025-10-12 10:26:54,229 | INFO     | architecture information:
[2025-10-12 06:27:50] 2025-10-12 10:26:54,230 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:27:50] 2025-10-12 10:26:54,256 | INFO     | cat /etc/os-release:
[2025-10-12 06:27:50] NAME="CentOS Linux"
[2025-10-12 06:27:50] VERSION="7 (Core)"
[2025-10-12 06:27:50] ID="centos"
[2025-10-12 06:27:50] ID_LIKE="rhel fedora"
[2025-10-12 06:27:50] VERSION_ID="7"
[2025-10-12 06:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:27:50] ANSI_COLOR="0;31"
[2025-10-12 06:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:27:50] HOME_URL="https://www.centos.org/"
[2025-10-12 06:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:27:50] 
[2025-10-12 06:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:27:50] 
[2025-10-12 06:27:50] 2025-10-12 10:26:54,256 | INFO     | ***************************************
[2025-10-12 06:27:50] 2025-10-12 10:26:54,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 06:27:50] 2025-10-12 10:26:54,784 | INFO     | sufficient remaining disk space (127379963904 B)
[2025-10-12 06:27:50] 2025-10-12 10:26:54,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:27:50] 2025-10-12 10:26:54,785 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:27:50] 2025-10-12 10:26:54,785 | INFO     | update_server=False
[2025-10-12 06:27:50] 2025-10-12 10:26:54,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:27:50] 2025-10-12 10:26:54,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:27:50] 2025-10-12 10:26:54,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:27:50] 2025-10-12 10:26:55,102 | INFO     | all data control threads have been joined
[2025-10-12 06:27:50] 2025-10-12 10:26:55,128 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 06:27:50] 2025-10-12 10:26:55,128 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 06:27:50] 2025-10-12 10:26:55,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:27:50] 2025-10-12 10:26:55,129 | INFO     | will abort loop
[2025-10-12 06:27:50] 2025-10-12 10:26:55,669 | INFO     | all payload control threads have been joined
[2025-10-12 06:27:50] 2025-10-12 10:26:55,791 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:55,928 | INFO     | all job control threads have been joined
[2025-10-12 06:27:50] 2025-10-12 10:26:56,034 | INFO     | [job] validate thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,055 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,107 | INFO     | [data] control thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,133 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,341 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,370 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,521 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,610 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,674 | INFO     | [payload] control thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,841 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,874 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:56,933 | INFO     | [job] control thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:57,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:27:50] 2025-10-12 10:26:58,492 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:26:58,791 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:27:05,265 | INFO     | job.realtimelogging is not enabled
[2025-10-12 06:27:50] 2025-10-12 10:27:06,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:27:50] 2025-10-12 10:27:25,548 | INFO     | PID=381685 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 06:27:50] 2025-10-12 10:27:25,548 | INFO     | .. there are 31 such processes running
[2025-10-12 06:27:50] 2025-10-12 10:27:25,549 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:27:50] 2025-10-12 10:27:25,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:27:50] 2025-10-12 10:27:25,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:27:50] 2025-10-12 10:27:43,364 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:27:50] 2025-10-12 10:27:45,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048282134336)>', '<ExcThread(monitor, started 140047793772288)>']
[2025-10-12 06:27:50] 2025-10-12 10:27:45,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:27:50] 2025-10-12 10:27:45,678 | INFO     | [monitor] control thread has ended
[2025-10-12 06:27:50] 2025-10-12 10:27:50,038 | INFO     | all workflow threads have been joined
[2025-10-12 06:27:50] 2025-10-12 10:27:50,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:27:50] 2025-10-12 10:27:50,039 | INFO     | traces error code: 0
[2025-10-12 06:27:50] 2025-10-12 10:27:50,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:27:50] 2025-10-12 10:27:50,219 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:27:50] 2025-10-12 10:27:50,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:27:50] 2025-10-12 10:27:50,230 [wrapper] pilotpid: 381685
[2025-10-12 06:27:50] 2025-10-12 10:27:50,234 [wrapper] Pilot exit status: 0
[2025-10-12 06:27:50] 2025-10-12 10:27:50,249 [wrapper] pandaids: 6838990999
[2025-10-12 06:27:50] 2025-10-12 10:27:50,353 [wrapper] cleanup supervisor_pilot  788826 381686
[2025-10-12 06:27:50] 2025-10-12 10:27:50,356 [wrapper] Test setup, not cleaning
[2025-10-12 06:27:50] 2025-10-12 10:27:50,359 [wrapper] apfmon messages muted
[2025-10-12 06:27:50] 2025-10-12 10:27:50,396 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:27:50] 2025-10-12 10:27:50,407 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:27:50]  *** Error codes and diagnostics ***
[2025-10-12 06:27:50]     "exeErrorCode": 0,
[2025-10-12 06:27:50]     "exeErrorDiag": "",
[2025-10-12 06:27:50]     "pilotErrorCode": 0,
[2025-10-12 06:27:50]     "pilotErrorDiag": "",
[2025-10-12 06:27:50]  *** Listing of results directory ***
[2025-10-12 06:27:50] total 404744
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:01 queuedata.json
[2025-10-12 06:27:50] -rwx------. 1 boincer umatlas     36292 Oct 11 19:01 runpilot2-wrapper.sh
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas       100 Oct 12 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:27:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 04:02 run_atlas
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas       105 Oct 12 04:02 job.xml
[2025-10-12 06:27:50] -rw-r--r--. 2 boincer umatlas 220659648 Oct 12 04:02 EVNT.46676267._002682.pool.root.1
[2025-10-12 06:27:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 04:02 shared
[2025-10-12 06:27:50] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 04:02 input.tar.gz
[2025-10-12 06:27:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:02 start_atlas.sh
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas         0 Oct 12 04:02 boinc_lockfile
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 04:02 pandaJob.out
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas    975520 Oct 12 04:02 agis_schedconf.cvmfs.json
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas   1560580 Oct 12 04:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:27:50] drwx------. 5 boincer umatlas      4096 Oct 12 04:02 pilot3
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas      6947 Oct 12 06:18 init_data.xml
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas 186758921 Oct 12 06:26 HITS.46676269._066488.pool.root.1
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas       529 Oct 12 06:26 boinc_task_state.xml
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas      1034 Oct 12 06:26 memory_monitor_summary.json
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas    375574 Oct 12 06:26 log.46676269._066488.job.log.tgz.1
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas      7773 Oct 12 06:26 heartbeat.json
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas        95 Oct 12 06:27 pilot_heartbeat.json
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas        27 Oct 12 06:27 wrapper_checkpoint.txt
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:27 boinc_mmap_file
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas      5082 Oct 12 06:27 pilotlog.txt
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas   1188440 Oct 12 06:27 log.46676269._066488.job.log.1
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas       357 Oct 12 06:27 output.list
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:27 runtime_log
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas   1587200 Oct 12 06:27 result.tar.gz
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 06:27 runtime_log.err
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas       652 Oct 12 06:27 PlVNDmHmxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVthNDmSTaAfn.diag
[2025-10-12 06:27:50] -rw-r--r--. 1 boincer umatlas     20977 Oct 12 06:27 stderr.txt
[2025-10-12 06:27:50] HITS file was successfully produced:
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas 186758921 Oct 12 06:26 shared/HITS.pool.root.1
[2025-10-12 06:27:50]  *** Contents of shared directory: ***
[2025-10-12 06:27:50] total 400008
[2025-10-12 06:27:50] -rw-r--r--. 2 boincer umatlas 220659648 Oct 12 04:02 ATLAS.root_0
[2025-10-12 06:27:50] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 04:02 input.tar.gz
[2025-10-12 06:27:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:02 start_atlas.sh
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas 186758921 Oct 12 06:26 HITS.pool.root.1
[2025-10-12 06:27:50] -rw-------. 1 boincer umatlas   1587200 Oct 12 06:27 result.tar.gz
06:27:52 (377786): run_atlas exited; CPU time 34532.925802
06:27:52 (377786): called boinc_finish(0)

</stderr_txt>
]]>

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