Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 06:18:30 (3440274): vboxwrapper version 26210
2025-10-12 06:18:30 (3440274): BOINC client version: 8.0.4
2025-10-12 06:18:30 (3440274): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-12 06:18:30 (3440274): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 06:18:30 (3440274): Create VM. (boinc_d09acfa7d10d1ec1, slot#1)
2025-10-12 06:18:30 (3440274): Setting Memory Size for VM. (4200MB)
2025-10-12 06:18:30 (3440274): Setting CPU Count for VM. (2)
2025-10-12 06:18:31 (3440274): Setting Chipset Options for VM.
2025-10-12 06:18:31 (3440274): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 06:18:31 (3440274): Setting Boot Options for VM.
2025-10-12 06:18:31 (3440274): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 06:18:31 (3440274): Enabling VM Network Access.
2025-10-12 06:18:32 (3440274): Disabling USB Support for VM.
2025-10-12 06:18:32 (3440274): Disabling COM Port Support for VM.
2025-10-12 06:18:32 (3440274): Disabling LPT Port Support for VM.
2025-10-12 06:18:32 (3440274): Disabling Audio Support for VM.
2025-10-12 06:18:32 (3440274): Disabling Clipboard Support for VM.
2025-10-12 06:18:32 (3440274): Disabling Drag and Drop Support for VM.
2025-10-12 06:18:32 (3440274): Adding storage controller(s) to VM.
2025-10-12 06:18:33 (3440274): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 06:18:33 (3440274): Adding VirtualBox Guest Additions to VM.
2025-10-12 06:18:33 (3440274): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 06:18:34 (3440274): forwarding host port 36957 to guest port 80
2025-10-12 06:18:34 (3440274): Enabling remote desktop for VM.
2025-10-12 06:18:34 (3440274): Required extension pack not installed, remote desktop not enabled.
2025-10-12 06:18:34 (3440274): Enabling shared directory for VM.
2025-10-12 06:18:34 (3440274): Starting VM using VBoxManage interface. (boinc_d09acfa7d10d1ec1, slot#1)
2025-10-12 06:18:35 (3440274): Successfully started VM. (PID = '3440974')
2025-10-12 06:18:35 (3440274): Reporting VM Process ID to BOINC.
2025-10-12 06:18:35 (3440274): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-12 06:18:35 (3440274): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 06:18:35 (3440274): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 06:18:35 (3440274): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 06:18:35 (3440274): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 06:18:35 (3440274): Detected: Web Application Enabled (http://localhost:36957)
2025-10-12 06:18:35 (3440274): Preference change detected
2025-10-12 06:18:35 (3440274): Setting CPU throttle for VM. (50%)
2025-10-12 06:18:35 (3440274): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 06:18:37 (3440274): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 06:18:37 (3440274): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 06:18:42 (3440274): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 06:18:42 (3440274): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 06:18:42 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 06:18:43 (3440274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 06:18:53 (3440274): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 06:18:53 (3440274): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 06:19:14 (3440274): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000350 main     Log opened 2025-10-12T04:19:12.673511000Z
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000549 main     OS Product: Linux
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000613 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000666 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000725 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000727 main     Process ID: 1282
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.000727 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 06:19:14 (3440274): Guest Log: 00:00:00.002285 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 06:19:15 (3440274): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 06:19:15 (3440274): Guest Log: [INFO] Mounting shared directory
2025-10-12 06:19:15 (3440274): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 06:19:18 (3440274): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 06:19:18 (3440274): Guest Log: [INFO] Detected branch: prod
2025-10-12 06:19:19 (3440274): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 06:19:19 (3440274): Guest Log: Copying input files
2025-10-12 06:19:23 (3440274): Guest Log: Copied input files into RunAtlas.
2025-10-12 06:19:23 (3440274): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 06:19:23 (3440274): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 06:19:23 (3440274): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 06:19:23 (3440274): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 06:19:31 (3440274): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 06:19:32 (3440274): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 06:19:32 (3440274): Guest Log: 2.6.3.0 1556 0 30148 151608 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 06:19:33 (3440274): Guest Log: copied the webapp to /var/www
2025-10-12 06:19:33 (3440274): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-12 06:19:33 (3440274): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-12 06:19:33 (3440274): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 06:19:33 (3440274): Guest Log:  *** Starting ATLAS job. (PandaID=6839162176 taskID=46676269) ***
2025-10-12 07:57:36 (3440274): Status Report: Elapsed Time: '6000.000000'
2025-10-12 07:57:36 (3440274): Status Report: CPU Time: '5650.630000'
2025-10-12 09:36:36 (3440274): Status Report: Elapsed Time: '12000.000000'
2025-10-12 09:36:36 (3440274): Status Report: CPU Time: '11676.220000'
2025-10-12 11:15:37 (3440274): Status Report: Elapsed Time: '18000.000000'
2025-10-12 11:15:37 (3440274): Status Report: CPU Time: '17693.430000'
2025-10-12 12:54:38 (3440274): Status Report: Elapsed Time: '24000.000000'
2025-10-12 12:54:38 (3440274): Status Report: CPU Time: '23713.930000'
2025-10-12 14:33:38 (3440274): Status Report: Elapsed Time: '30000.000000'
2025-10-12 14:33:38 (3440274): Status Report: CPU Time: '29728.750000'
2025-10-12 16:12:39 (3440274): Status Report: Elapsed Time: '36000.000000'
2025-10-12 16:12:39 (3440274): Status Report: CPU Time: '35747.300000'
2025-10-12 17:51:40 (3440274): Status Report: Elapsed Time: '42000.000000'
2025-10-12 17:51:40 (3440274): Status Report: CPU Time: '41761.560000'
2025-10-12 19:30:40 (3440274): Status Report: Elapsed Time: '48000.000000'
2025-10-12 19:30:40 (3440274): Status Report: CPU Time: '47772.540000'
2025-10-12 21:00:50 (3440274): Guest Log:  *** Job finished ***
2025-10-12 21:00:50 (3440274): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:13,457 | INFO     | [job] queue monitor thread has finished
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:16,540 | INFO     | [data] queue_monitor thread has finished
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:39,540 | INFO     | [monitor] cgroup control has ended
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:40,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629617186624)>', '<ExcThread(monitor, started 139629000890112)>']
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:41,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:41,551 | INFO     | [monitor] control thread has ended
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:45,987 | INFO     | all workflow threads have been joined
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:45,987 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:45,988 | INFO     | traces error code: 0
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:45,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,176 [wrapper] ==== pilot stdout END ====
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,228 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,238 [wrapper] pilotpid: 5925
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,247 [wrapper] Pilot exit status: 0
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,320 [wrapper] pandaids: 6839162176
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,369 [wrapper] cleanup supervisor_pilot 23957 5926
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,377 [wrapper] Test setup, not cleaning
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,387 [wrapper] apfmon messages muted
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,396 [wrapper] ==== wrapper stdout END ====
2025-10-12 21:00:50 (3440274): Guest Log: 2025-10-12 19:00:46,435 [wrapper] ==== wrapper stderr END ====
2025-10-12 21:00:50 (3440274): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 21:00:50 (3440274): Guest Log:     "exeErrorCode": 0,
2025-10-12 21:00:50 (3440274): Guest Log:     "exeErrorDiag": "",
2025-10-12 21:00:50 (3440274): Guest Log:     "pilotErrorCode": 0,
2025-10-12 21:00:50 (3440274): Guest Log:     "pilotErrorDiag": "",
2025-10-12 21:00:50 (3440274): Guest Log:  *** Listing of results directory ***
2025-10-12 21:00:51 (3440274): Guest Log: total 205248
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 23:09 pilot3.tar.gz
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 23:12 queuedata.json
2025-10-12 21:00:51 (3440274): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 23:12 runpilot2-wrapper.sh
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas    569679 Oct 12 04:19 input.tar.gz
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 12 04:19 start_atlas.sh
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas      6858 Oct 12 04:19 init_data.xml
2025-10-12 21:00:51 (3440274): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 04:19 EVNT.46676267._002693.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 12 04:19 pandaJob.out
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas    975512 Oct 12 04:20 agis_schedconf.cvmfs.json
2025-10-12 21:00:51 (3440274): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 04:20 pilot3
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas 193145390 Oct 12 18:58 HITS.46676269._066783.pool.root.1
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 18:59 pilot_heartbeat.json
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas      1001 Oct 12 18:59 memory_monitor_summary.json
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 18:59 agis_ddmendpoints.agis.ALL.json
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas    786656 Oct 12 18:59 log.46676269._066783.job.log.tgz.1
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas      7744 Oct 12 19:00 heartbeat.json
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 12 19:00 pilotlog.txt
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas   5810645 Oct 12 19:00 log.46676269._066783.job.log.1
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 19:00 output.list
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 19:00 runtime_log
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas   6615040 Oct 12 19:00 result.tar.gz
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 atlas atlas      8613 Oct 12 19:00 runtime_log.err
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas       651 Oct 12 19:00 erGKDmNwxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmelSMDmL1t9um.diag
2025-10-12 21:00:51 (3440274): Guest Log: Looking for outputfile HITS.46676269._066783.pool.root.1
2025-10-12 21:00:51 (3440274): Guest Log: HITS file was successfully produced
2025-10-12 21:00:51 (3440274): Guest Log: -rw-------. 1 atlas atlas 193145390 Oct 12 18:58 /home/atlas/RunAtlas/HITS.46676269._066783.pool.root.1
2025-10-12 21:00:51 (3440274): Guest Log: Successfully finished the ATLAS job!
2025-10-12 21:00:51 (3440274): Guest Log: Copying the results back to the shared directory!
2025-10-12 21:00:51 (3440274): Guest Log:  *** Contents of shared directory: ***
2025-10-12 21:00:51 (3440274): Guest Log: total 223136
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 root root 221277644 Oct 12 04:18 ATLAS.root_0
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 root root      6858 Oct 12 04:18 init_data.xml
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 root root    569679 Oct 12 04:18 input.tar.gz
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 root root   6615040 Oct 12 19:00 result.tar.gz
2025-10-12 21:00:51 (3440274): Guest Log: -rw-r--r--. 1 root root     15120 Oct 12 04:18 start_atlas.sh
2025-10-12 21:00:51 (3440274): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 21:00:51 (3440274): VM Completion File Detected.
2025-10-12 21:00:51 (3440274): Powering off VM.
2025-10-12 21:00:52 (3440274): Successfully stopped VM.
2025-10-12 21:00:52 (3440274): Deregistering VM. (boinc_d09acfa7d10d1ec1, slot#1)
2025-10-12 21:00:52 (3440274): Removing network bandwidth throttle group from VM.
2025-10-12 21:00:52 (3440274): Removing VM from VirtualBox.
2025-10-12 21:00:57 (3440274): called boinc_finish(0)

</stderr_txt>
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