Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:48 (2929943): wrapper (7.7.26015): starting
00:14:48 (2929943): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:14:48] Arguments: --nthreads 8
[2025-10-12 00:14:48] Threads: 8
[2025-10-12 00:14:48] Checking for CVMFS
[2025-10-12 00:14:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:14:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:14:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:14:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:14:49] 2.13.2.0 4298 23857 221084 151608 2 19 23545971 32935936 4331 16776704 0 68726562 99.720 51565229 29846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:14:49] CVMFS is ok
[2025-10-12 00:14:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:14:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:14:49] Further information can be found at the LHC@home message board.
[2025-10-12 00:14:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:14:49] Checking for apptainer binary...
[2025-10-12 00:14:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:14:49] Running /usr/bin/apptainer --version
[2025-10-12 00:14:49] apptainer version 1.4.3-1.el9
[2025-10-12 00:14:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:14:49] c-8-24.aglt2.org
[2025-10-12 00:14:49] apptainer works
[2025-10-12 00:14:49] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:14:49] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:14:49] Starting ATLAS job with PandaID=6839083788
[2025-10-12 00:14:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:02:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:02:15] 2025-10-12 06:01:15,344 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,345 | INFO     | sum of deviations: -8292131837.5
[2025-10-12 02:02:15] 2025-10-12 06:01:15,345 | INFO     | mean x: 1760245667.5
[2025-10-12 02:02:15] 2025-10-12 06:01:15,345 | INFO     | mean y: 2288702.1634615385
[2025-10-12 02:02:15] 2025-10-12 06:01:15,345 | INFO     | -- intersect: 41852841161.28648
[2025-10-12 02:02:15] 2025-10-12 06:01:15,345 | INFO     | intersect: 41852841161.28648
[2025-10-12 02:02:15] 2025-10-12 06:01:15,346 | INFO     | chi2: 1.7699152369031914
[2025-10-12 02:02:15] 2025-10-12 06:01:15,346 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,346 | INFO     | sum of deviations: -4756322377.999995
[2025-10-12 02:02:15] 2025-10-12 06:01:15,347 | INFO     | mean x: 1760245515.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,347 | INFO     | mean y: 2299854.696969697
[2025-10-12 02:02:15] 2025-10-12 06:01:15,347 | INFO     | -- intersect: 27831763422.69809
[2025-10-12 02:02:15] 2025-10-12 06:01:15,347 | INFO     | intersect: 27831763422.69809
[2025-10-12 02:02:15] 2025-10-12 06:01:15,347 | INFO     | chi2: 1.750014018096475
[2025-10-12 02:02:15] 2025-10-12 06:01:15,347 | INFO     | current chi2=1.750014018096475 (change=1.1244164913534218 %)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,348 | INFO     | right removable region: 98
[2025-10-12 02:02:15] 2025-10-12 06:01:15,348 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,348 | INFO     | sum of deviations: -23280414723.000004
[2025-10-12 02:02:15] 2025-10-12 06:01:15,348 | INFO     | mean x: 1760245820.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,349 | INFO     | mean y: 2335551.727272727
[2025-10-12 02:02:15] 2025-10-12 06:01:15,349 | INFO     | -- intersect: 136217149046.63739
[2025-10-12 02:02:15] 2025-10-12 06:01:15,349 | INFO     | intersect: 136217149046.63739
[2025-10-12 02:02:15] 2025-10-12 06:01:15,349 | INFO     | chi2: 0.18445197292855567
[2025-10-12 02:02:15] 2025-10-12 06:01:15,349 | INFO     | current chi2=0.18445197292855567 (change=89.5784855069506 %)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,349 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 02:02:15] 2025-10-12 06:01:15,350 | INFO     | sum of deviations: -23593593297.999996
[2025-10-12 02:02:15] 2025-10-12 06:01:15,350 | INFO     | mean x: 1760245972.5
[2025-10-12 02:02:15] 2025-10-12 06:01:15,350 | INFO     | mean y: 2336380.14893617
[2025-10-12 02:02:15] 2025-10-12 06:01:15,350 | INFO     | -- intersect: 161272719156.8597
[2025-10-12 02:02:15] 2025-10-12 06:01:15,350 | INFO     | intersect: 161272719156.8597
[2025-10-12 02:02:15] 2025-10-12 06:01:15,351 | INFO     | chi2: 0.10052663599156905
[2025-10-12 02:02:15] 2025-10-12 06:01:15,351 | INFO     | current chi2=0.10052663599156905 (change=45.49983153039717 %)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,351 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,352 | INFO     | sum of deviations: -20855424383.000008
[2025-10-12 02:02:15] 2025-10-12 06:01:15,352 | INFO     | mean x: 1760246125.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,352 | INFO     | mean y: 2325576.438202247
[2025-10-12 02:02:15] 2025-10-12 06:01:15,352 | INFO     | -- intersect: 167959599224.26205
[2025-10-12 02:02:15] 2025-10-12 06:01:15,352 | INFO     | intersect: 167959599224.26205
[2025-10-12 02:02:15] 2025-10-12 06:01:15,352 | INFO     | chi2: 0.0953651126899896
[2025-10-12 02:02:15] 2025-10-12 06:01:15,353 | INFO     | current chi2=0.0953651126899896 (change=5.1344832647263186 %)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,353 | INFO     | left removable region: 30
[2025-10-12 02:02:15] 2025-10-12 06:01:15,353 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,353 | INFO     | sum of deviations: -8028928702.000001
[2025-10-12 02:02:15] 2025-10-12 06:01:15,353 | INFO     | mean x: 1760246399.5
[2025-10-12 02:02:15] 2025-10-12 06:01:15,354 | INFO     | mean y: 2293062.4411764704
[2025-10-12 02:02:15] 2025-10-12 06:01:15,354 | INFO     | -- intersect: 144986212420.7921
[2025-10-12 02:02:15] 2025-10-12 06:01:15,354 | INFO     | intersect: 144986212420.7921
[2025-10-12 02:02:15] 2025-10-12 06:01:15,354 | INFO     | chi2: 0.06738231342104925
[2025-10-12 02:02:15] 2025-10-12 06:01:15,354 | INFO     | -- intersect: 144986212420.7921
[2025-10-12 02:02:15] 2025-10-12 06:01:15,354 | INFO     | current memory leak: -82.37 B/s (using 68 data points, chi2=0.07)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | could have reported an average CPU frequency of 2671 MHz (7 samples)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | ..............................
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | . Timing measurements:
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | . get job = 0 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | . initial setup = 2 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | . payload setup = 5 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,355 | INFO     | . stage-in = 0 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,356 | INFO     | . payload execution = 6343 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,356 | INFO     | . stage-out = 1 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,356 | INFO     | . log creation = 0 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,356 | INFO     | ..............................
[2025-10-12 02:02:15] 2025-10-12 06:01:15,605 | INFO     | time since job start (6376s) is within the limit (172800.0s)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | 
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | job summary report
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | --------------------------------------------------
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | PanDA job id: 6839083788
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | task id: 46676269
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | errors: (none)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | pilot state: finished 
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | transexitcode: 0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | exeerrorcode: 0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | exeerrordiag: 
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | exitcode: 0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | exitmsg: OK
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | cpuconsumptiontime: 45269 s
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | nevents: 400
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | neventsw: 0
[2025-10-12 02:02:15] 2025-10-12 06:01:15,822 | INFO     | pid: 2944430
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | pgrp: 2944430
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | corecount: 8
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | event service: False
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | sizes: {0: 2348807, 4: 2349069, 11: 2349097, 6353: 2376179, 6354: 2385233, 6360: 2385371}
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | --------------------------------------------------
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | 
[2025-10-12 02:02:15] 2025-10-12 06:01:15,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 02:02:15] 2025-10-12 06:01:15,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,841 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,841 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,844 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:02:15] 2025-10-12 06:01:15,844 | INFO     | job 6839083788 has completed (purged errors)
[2025-10-12 02:02:15] 2025-10-12 06:01:15,844 | INFO     | overall cleanup function is called
[2025-10-12 02:02:15] 2025-10-12 06:01:16,852 | INFO     | --- collectZombieJob: --- 10, [2944430]
[2025-10-12 02:02:15] 2025-10-12 06:01:16,852 | INFO     | zombie collector waiting for pid 2944430
[2025-10-12 02:02:15] 2025-10-12 06:01:16,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:02:15] 2025-10-12 06:01:16,853 | INFO     | collected zombie processes
[2025-10-12 02:02:15] 2025-10-12 06:01:16,853 | INFO     | will attempt to kill all subprocesses of pid=2944430
[2025-10-12 02:02:15] 2025-10-12 06:01:17,113 | INFO     | process IDs to be killed: [2944430] (in reverse order)
[2025-10-12 02:02:15] 2025-10-12 06:01:17,191 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:02:15] 2025-10-12 06:01:17,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:02:15] 2025-10-12 06:01:17,201 | INFO     | did not find any defunct processes belonging to 2944430
[2025-10-12 02:02:15] 2025-10-12 06:01:17,209 | INFO     | did not find any defunct processes belonging to 2944430
[2025-10-12 02:02:15] 2025-10-12 06:01:17,210 | INFO     | ready for new job
[2025-10-12 02:02:15] 2025-10-12 06:01:17,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:02:15] 2025-10-12 06:01:17,212 | INFO     | ***************************************
[2025-10-12 02:02:15] 2025-10-12 06:01:17,212 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:02:15] 2025-10-12 06:01:17,212 | INFO     | ***************************************
[2025-10-12 02:02:15] 2025-10-12 06:01:17,213 | INFO     | 
[2025-10-12 02:02:15] 2025-10-12 06:01:17,226 | INFO     | architecture information:
[2025-10-12 02:02:15] 2025-10-12 06:01:17,227 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:02:15] 2025-10-12 06:01:17,238 | INFO     | cat /etc/os-release:
[2025-10-12 02:02:15] NAME="CentOS Linux"
[2025-10-12 02:02:15] VERSION="7 (Core)"
[2025-10-12 02:02:15] ID="centos"
[2025-10-12 02:02:15] ID_LIKE="rhel fedora"
[2025-10-12 02:02:15] VERSION_ID="7"
[2025-10-12 02:02:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:02:15] ANSI_COLOR="0;31"
[2025-10-12 02:02:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:02:15] HOME_URL="https://www.centos.org/"
[2025-10-12 02:02:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:02:15] 
[2025-10-12 02:02:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:02:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:02:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:02:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:02:15] 
[2025-10-12 02:02:15] 2025-10-12 06:01:17,239 | INFO     | ***************************************
[2025-10-12 02:02:15] 2025-10-12 06:01:17,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 02:02:15] 2025-10-12 06:01:17,754 | INFO     | sufficient remaining disk space (74448896000 B)
[2025-10-12 02:02:15] 2025-10-12 06:01:17,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:02:15] 2025-10-12 06:01:17,755 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:02:15] 2025-10-12 06:01:17,755 | INFO     | update_server=False
[2025-10-12 02:02:15] 2025-10-12 06:01:17,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:02:15] 2025-10-12 06:01:17,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:02:15] 2025-10-12 06:01:17,838 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 02:02:15] 2025-10-12 06:01:17,839 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 02:02:15] 2025-10-12 06:01:17,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:02:15] 2025-10-12 06:01:17,839 | INFO     | will abort loop
[2025-10-12 02:02:15] 2025-10-12 06:01:17,874 | INFO     | all data control threads have been joined
[2025-10-12 02:02:15] 2025-10-12 06:01:18,382 | INFO     | all payload control threads have been joined
[2025-10-12 02:02:15] 2025-10-12 06:01:18,756 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:18,844 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:18,880 | INFO     | [data] control thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:18,943 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:18,971 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,023 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,134 | INFO     | all job control threads have been joined
[2025-10-12 02:02:15] 2025-10-12 06:01:19,379 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,387 | INFO     | [payload] control thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,761 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,800 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,944 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:19,969 | INFO     | [job] validate thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:20,139 | INFO     | [job] control thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:20,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:02:15] 2025-10-12 06:01:20,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:02:15] 2025-10-12 06:01:21,480 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:24,151 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:28,528 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:02:15] 2025-10-12 06:01:29,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:02:15] 2025-10-12 06:01:49,012 | INFO     | PID=2934169 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:02:15] 2025-10-12 06:01:49,013 | INFO     | .. there are 6 such processes running
[2025-10-12 02:02:15] 2025-10-12 06:01:49,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:02:15] 2025-10-12 06:01:49,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:02:15] 2025-10-12 06:01:49,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:02:15] 2025-10-12 06:02:09,606 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:02:15] 2025-10-12 06:02:10,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098590697280)>', '<ExcThread(monitor, started 140098234459904)>']
[2025-10-12 02:02:15] 2025-10-12 06:02:11,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:02:15] 2025-10-12 06:02:11,106 | INFO     | [monitor] control thread has ended
[2025-10-12 02:02:15] 2025-10-12 06:02:15,409 | INFO     | all workflow threads have been joined
[2025-10-12 02:02:15] 2025-10-12 06:02:15,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:02:15] 2025-10-12 06:02:15,410 | INFO     | traces error code: 0
[2025-10-12 02:02:15] 2025-10-12 06:02:15,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:02:15] 2025-10-12 06:02:15,526 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:02:15] 2025-10-12 06:02:15,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:02:15] 2025-10-12 06:02:15,530 [wrapper] pilotpid: 2934169
[2025-10-12 02:02:15] 2025-10-12 06:02:15,532 [wrapper] Pilot exit status: 0
[2025-10-12 02:02:15] 2025-10-12 06:02:15,542 [wrapper] pandaids: 6839083788
[2025-10-12 02:02:15] 2025-10-12 06:02:15,593 [wrapper] cleanup supervisor_pilot 3189923 2934170
[2025-10-12 02:02:15] 2025-10-12 06:02:15,596 [wrapper] Test setup, not cleaning
[2025-10-12 02:02:15] 2025-10-12 06:02:15,598 [wrapper] apfmon messages muted
[2025-10-12 02:02:15] 2025-10-12 06:02:15,600 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:02:15] 2025-10-12 06:02:15,603 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:02:15]  *** Error codes and diagnostics ***
[2025-10-12 02:02:15]     "exeErrorCode": 0,
[2025-10-12 02:02:15]     "exeErrorDiag": "",
[2025-10-12 02:02:15]     "pilotErrorCode": 0,
[2025-10-12 02:02:15]     "pilotErrorDiag": "",
[2025-10-12 02:02:15]  *** Listing of results directory ***
[2025-10-12 02:02:15] total 416312
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:59 queuedata.json
[2025-10-12 02:02:15] -rwx------. 1 boincer umatlas     36292 Oct 11 19:00 runpilot2-wrapper.sh
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:02:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:14 run_atlas
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:14 job.xml
[2025-10-12 02:02:15] -rw-r--r--. 2 boincer umatlas 220919758 Oct 12 00:14 EVNT.46676267._001219.pool.root.1
[2025-10-12 02:02:15] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 00:14 input.tar.gz
[2025-10-12 02:02:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:14 start_atlas.sh
[2025-10-12 02:02:15] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:14 shared
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:14 boinc_lockfile
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:14 pandaJob.out
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas    975512 Oct 12 00:14 agis_schedconf.cvmfs.json
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:02:15] drwx------. 5 boincer umatlas      4096 Oct 12 00:14 pilot3
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 01:57 init_data.xml
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas 198934784 Oct 12 02:00 HITS.46676269._066552.pool.root.1
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas       529 Oct 12 02:00 boinc_task_state.xml
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas        95 Oct 12 02:00 pilot_heartbeat.json
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas      1033 Oct 12 02:01 memory_monitor_summary.json
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas    346916 Oct 12 02:01 log.46676269._066552.job.log.tgz.1
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas      7814 Oct 12 02:01 heartbeat.json
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 02:02 boinc_mmap_file
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas        27 Oct 12 02:02 wrapper_checkpoint.txt
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas      5081 Oct 12 02:02 pilotlog.txt
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas    928265 Oct 12 02:02 log.46676269._066552.job.log.1
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas       357 Oct 12 02:02 output.list
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas       620 Oct 12 02:02 runtime_log
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas   1290240 Oct 12 02:02 result.tar.gz
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas      8693 Oct 12 02:02 runtime_log.err
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas       650 Oct 12 02:02 mTINDmFlxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRshNDmM22Pym.diag
[2025-10-12 02:02:15] -rw-r--r--. 1 boincer umatlas     20921 Oct 12 02:02 stderr.txt
[2025-10-12 02:02:15] HITS file was successfully produced:
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas 198934784 Oct 12 02:00 shared/HITS.pool.root.1
[2025-10-12 02:02:15]  *** Contents of shared directory: ***
[2025-10-12 02:02:15] total 411860
[2025-10-12 02:02:15] -rw-r--r--. 2 boincer umatlas 220919758 Oct 12 00:14 ATLAS.root_0
[2025-10-12 02:02:15] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 00:14 input.tar.gz
[2025-10-12 02:02:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:14 start_atlas.sh
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas 198934784 Oct 12 02:00 HITS.pool.root.1
[2025-10-12 02:02:15] -rw-------. 1 boincer umatlas   1290240 Oct 12 02:02 result.tar.gz
02:02:17 (2929943): run_atlas exited; CPU time 45423.262913
02:02:17 (2929943): called boinc_finish(0)

</stderr_txt>
]]>

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