Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:22:14 (2204411): wrapper (7.7.26015): starting
00:22:14 (2204411): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:22:14] Arguments: --nthreads 9
[2025-10-12 00:22:14] Threads: 9
[2025-10-12 00:22:14] Checking for CVMFS
[2025-10-12 00:22:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:22:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:22:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:22:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:22:16] 2.13.2.0 2209255 128776 276616 151608 3 283 22652353 32935937 30244 16776704 0 101484042 99.677 90821982 30198 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:22:16] CVMFS is ok
[2025-10-12 00:22:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:22:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:22:16] Further information can be found at the LHC@home message board.
[2025-10-12 00:22:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:22:16] Checking for apptainer binary...
[2025-10-12 00:22:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:22:16] Running /usr/bin/apptainer --version
[2025-10-12 00:22:17] apptainer version 1.4.3-1.el9
[2025-10-12 00:22:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:22:18] c-5-6.aglt2.org
[2025-10-12 00:22:18] apptainer works
[2025-10-12 00:22:18] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:22:18] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:22:18] Starting ATLAS job with PandaID=6838990874
[2025-10-12 00:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:36:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:36:49] 2025-10-12 17:36:00,701 | INFO     | sum of square deviations: 139908358264.65717
[2025-10-12 13:36:49] 2025-10-12 17:36:00,765 | INFO     | sum of deviations: 612007759245.2177
[2025-10-12 13:36:49] 2025-10-12 17:36:00,765 | INFO     | mean x: 1760267124.350717
[2025-10-12 13:36:49] 2025-10-12 17:36:00,770 | INFO     | mean y: 2087255.0586701434
[2025-10-12 13:36:49] 2025-10-12 17:36:00,770 | INFO     | -- intersect: -7697932613.726008
[2025-10-12 13:36:49] 2025-10-12 17:36:00,770 | INFO     | intersect: -7697932613.726008
[2025-10-12 13:36:49] 2025-10-12 17:36:00,772 | INFO     | chi2: 2.740620593351239
[2025-10-12 13:36:49] 2025-10-12 17:36:00,772 | INFO     | current chi2=2.740620593351239 (change=39.96092415253387 %)
[2025-10-12 13:36:49] 2025-10-12 17:36:00,773 | INFO     | sum of square deviations: 137189890670.94505
[2025-10-12 13:36:49] 2025-10-12 17:36:00,891 | INFO     | sum of deviations: 513233198959.00024
[2025-10-12 13:36:49] 2025-10-12 17:36:00,891 | INFO     | mean x: 1760267276.8503938
[2025-10-12 13:36:49] 2025-10-12 17:36:00,891 | INFO     | mean y: 2092793.5
[2025-10-12 13:36:49] 2025-10-12 17:36:00,891 | INFO     | -- intersect: -6583141738.741736
[2025-10-12 13:36:49] 2025-10-12 17:36:00,892 | INFO     | intersect: -6583141738.741736
[2025-10-12 13:36:49] 2025-10-12 17:36:00,902 | INFO     | chi2: 1.9793940745388428
[2025-10-12 13:36:49] 2025-10-12 17:36:00,903 | INFO     | current chi2=1.9793940745388428 (change=27.775698710691156 %)
[2025-10-12 13:36:49] 2025-10-12 17:36:00,904 | INFO     | sum of square deviations: 134507005533.32123
[2025-10-12 13:36:49] 2025-10-12 17:36:00,921 | INFO     | sum of deviations: 427410208457.93286
[2025-10-12 13:36:49] 2025-10-12 17:36:00,922 | INFO     | mean x: 1760267429.346103
[2025-10-12 13:36:49] 2025-10-12 17:36:00,922 | INFO     | mean y: 2097671.248348745
[2025-10-12 13:36:49] 2025-10-12 17:36:00,922 | INFO     | -- intersect: -5591337896.924695
[2025-10-12 13:36:49] 2025-10-12 17:36:00,922 | INFO     | intersect: -5591337896.924695
[2025-10-12 13:36:49] 2025-10-12 17:36:00,923 | INFO     | chi2: 1.4251596944706924
[2025-10-12 13:36:49] 2025-10-12 17:36:00,923 | INFO     | current chi2=1.4251596944706924 (change=28.000204062310097 %)
[2025-10-12 13:36:49] 2025-10-12 17:36:00,925 | INFO     | sum of square deviations: 131859376654.8517
[2025-10-12 13:36:49] 2025-10-12 17:36:00,943 | INFO     | sum of deviations: 355033892652.82996
[2025-10-12 13:36:49] 2025-10-12 17:36:00,943 | INFO     | mean x: 1760267581.8404255
[2025-10-12 13:36:49] 2025-10-12 17:36:00,943 | INFO     | mean y: 2101839.7819148935
[2025-10-12 13:36:49] 2025-10-12 17:36:00,943 | INFO     | -- intersect: -4737452278.748763
[2025-10-12 13:36:49] 2025-10-12 17:36:00,943 | INFO     | intersect: -4737452278.748763
[2025-10-12 13:36:49] 2025-10-12 17:36:00,944 | INFO     | chi2: 1.0350727354447782
[2025-10-12 13:36:49] 2025-10-12 17:36:00,945 | INFO     | current chi2=1.0350727354447782 (change=27.37145602274371 %)
[2025-10-12 13:36:49] 2025-10-12 17:36:00,945 | INFO     | sum of square deviations: 129246816909.66537
[2025-10-12 13:36:49] 2025-10-12 17:36:00,990 | INFO     | time since job start (47564s) is within the limit (172800.0s)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,007 | INFO     | sum of deviations: 308685730955.66125
[2025-10-12 13:36:49] 2025-10-12 17:36:01,007 | INFO     | mean x: 1760267734.3319945
[2025-10-12 13:36:49] 2025-10-12 17:36:01,007 | INFO     | mean y: 2104542.327978581
[2025-10-12 13:36:49] 2025-10-12 17:36:01,007 | INFO     | -- intersect: -4202018586.1334004
[2025-10-12 13:36:49] 2025-10-12 17:36:01,007 | INFO     | intersect: -4202018586.1334004
[2025-10-12 13:36:49] 2025-10-12 17:36:01,016 | INFO     | chi2: 0.8726677495042611
[2025-10-12 13:36:49] 2025-10-12 17:36:01,016 | INFO     | current chi2=0.8726677495042611 (change=15.690200348164954 %)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,016 | INFO     | left removable region: 60
[2025-10-12 13:36:49] 2025-10-12 17:36:01,017 | INFO     | sum of square deviations: 111446411034.16309
[2025-10-12 13:36:49] 2025-10-12 17:36:01,040 | INFO     | sum of deviations: 165979864972.2307
[2025-10-12 13:36:49] 2025-10-12 17:36:01,040 | INFO     | mean x: 1760268466.3178623
[2025-10-12 13:36:49] 2025-10-12 17:36:01,040 | INFO     | mean y: 2111857.4149085796
[2025-10-12 13:36:49] 2025-10-12 17:36:01,040 | INFO     | -- intersect: -2619499010.473445
[2025-10-12 13:36:49] 2025-10-12 17:36:01,040 | INFO     | intersect: -2619499010.473445
[2025-10-12 13:36:49] 2025-10-12 17:36:01,041 | INFO     | chi2: 0.6212168356083482
[2025-10-12 13:36:49] 2025-10-12 17:36:01,042 | INFO     | -- intersect: -2619499010.473445
[2025-10-12 13:36:49] 2025-10-12 17:36:01,042 | INFO     | current memory leak: 1.49 B/s (using 711 data points, chi2=0.62)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,043 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,043 | INFO     | ..............................
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . Timing measurements:
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . get job = 0 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . initial setup = 3 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . payload setup = 41 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . stage-in = 0 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . payload execution = 47448 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . stage-out = 3 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | . log creation = 0 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,044 | INFO     | ..............................
[2025-10-12 13:36:49] 2025-10-12 17:36:01,238 | INFO     | 
[2025-10-12 13:36:49] 2025-10-12 17:36:01,238 | INFO     | job summary report
[2025-10-12 13:36:49] 2025-10-12 17:36:01,238 | INFO     | --------------------------------------------------
[2025-10-12 13:36:49] 2025-10-12 17:36:01,238 | INFO     | PanDA job id: 6838990874
[2025-10-12 13:36:49] 2025-10-12 17:36:01,238 | INFO     | task id: 46676269
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | errors: (none)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | pilot state: finished 
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | transexitcode: 0
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | exeerrorcode: 0
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | exeerrordiag: 
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | exitcode: 0
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | exitmsg: OK
[2025-10-12 13:36:49] 2025-10-12 17:36:01,239 | INFO     | cpuconsumptiontime: 49923 s
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | nevents: 400
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | neventsw: 0
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | pid: 2220165
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | pgrp: 2220165
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | corecount: 9
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | event service: False
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 3: 2348913, 14: 2348941, 25: 2349387, 36: 2349387, 47493: 2395016, 47497: 2404014, 47500: 2404070, 47509: 2404264}
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | --------------------------------------------------
[2025-10-12 13:36:49] 2025-10-12 17:36:01,240 | INFO     | 
[2025-10-12 13:36:49] 2025-10-12 17:36:01,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 13:36:49] 2025-10-12 17:36:01,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:36:49] 2025-10-12 17:36:01,373 | INFO     | job 6838990874 has completed (purged errors)
[2025-10-12 13:36:49] 2025-10-12 17:36:01,374 | INFO     | overall cleanup function is called
[2025-10-12 13:36:49] 2025-10-12 17:36:02,401 | INFO     | --- collectZombieJob: --- 10, [2220165]
[2025-10-12 13:36:49] 2025-10-12 17:36:02,401 | INFO     | zombie collector waiting for pid 2220165
[2025-10-12 13:36:49] 2025-10-12 17:36:02,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:36:49] 2025-10-12 17:36:02,401 | INFO     | collected zombie processes
[2025-10-12 13:36:49] 2025-10-12 17:36:02,402 | INFO     | will attempt to kill all subprocesses of pid=2220165
[2025-10-12 13:36:49] 2025-10-12 17:36:03,150 | INFO     | process IDs to be killed: [2220165] (in reverse order)
[2025-10-12 13:36:49] 2025-10-12 17:36:03,337 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:36:49] 2025-10-12 17:36:03,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:36:49] 2025-10-12 17:36:03,371 | INFO     | did not find any defunct processes belonging to 2220165
[2025-10-12 13:36:49] 2025-10-12 17:36:03,430 | INFO     | did not find any defunct processes belonging to 2220165
[2025-10-12 13:36:49] 2025-10-12 17:36:03,430 | INFO     | ready for new job
[2025-10-12 13:36:49] 2025-10-12 17:36:03,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:36:49] 2025-10-12 17:36:03,444 | INFO     | ***************************************
[2025-10-12 13:36:49] 2025-10-12 17:36:03,444 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:36:49] 2025-10-12 17:36:03,444 | INFO     | ***************************************
[2025-10-12 13:36:49] 2025-10-12 17:36:03,445 | INFO     | 
[2025-10-12 13:36:49] 2025-10-12 17:36:03,446 | INFO     | architecture information:
[2025-10-12 13:36:49] 2025-10-12 17:36:03,453 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:36:49] 2025-10-12 17:36:03,495 | INFO     | cat /etc/os-release:
[2025-10-12 13:36:49] NAME="CentOS Linux"
[2025-10-12 13:36:49] VERSION="7 (Core)"
[2025-10-12 13:36:49] ID="centos"
[2025-10-12 13:36:49] ID_LIKE="rhel fedora"
[2025-10-12 13:36:49] VERSION_ID="7"
[2025-10-12 13:36:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:36:49] ANSI_COLOR="0;31"
[2025-10-12 13:36:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:36:49] HOME_URL="https://www.centos.org/"
[2025-10-12 13:36:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:36:49] 
[2025-10-12 13:36:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:36:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:36:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:36:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:36:49] 
[2025-10-12 13:36:49] 2025-10-12 17:36:03,495 | INFO     | ***************************************
[2025-10-12 13:36:49] 2025-10-12 17:36:03,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 13:36:49] 2025-10-12 17:36:04,080 | INFO     | sufficient remaining disk space (75645321216 B)
[2025-10-12 13:36:49] 2025-10-12 17:36:04,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:36:49] 2025-10-12 17:36:04,081 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:36:49] 2025-10-12 17:36:04,081 | INFO     | update_server=False
[2025-10-12 13:36:49] 2025-10-12 17:36:04,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:36:49] 2025-10-12 17:36:04,185 | INFO     | all payload control threads have been joined
[2025-10-12 13:36:49] 2025-10-12 17:36:04,285 | INFO     | all job control threads have been joined
[2025-10-12 13:36:49] 2025-10-12 17:36:04,454 | INFO     | all data control threads have been joined
[2025-10-12 13:36:49] 2025-10-12 17:36:04,482 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:36:49] 2025-10-12 17:36:04,482 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:36:49] 2025-10-12 17:36:04,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:36:49] 2025-10-12 17:36:04,482 | INFO     | will abort loop
[2025-10-12 13:36:49] 2025-10-12 17:36:04,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:36:49] 2025-10-12 17:36:05,087 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,163 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,192 | INFO     | [payload] control thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,290 | INFO     | [job] control thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,383 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,459 | INFO     | [data] control thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,489 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,644 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,742 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,742 | INFO     | [job] validate thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,891 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:05,909 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:06,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:36:49] 2025-10-12 17:36:06,781 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:07,259 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:07,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:36:49] 2025-10-12 17:36:11,551 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:14,212 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:36:49] 2025-10-12 17:36:15,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:36:49] 2025-10-12 17:36:34,793 | INFO     | PID=2210260 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:36:49] 2025-10-12 17:36:34,793 | INFO     | .. there are 40 such processes running
[2025-10-12 13:36:49] 2025-10-12 17:36:34,795 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:36:49] 2025-10-12 17:36:34,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:36:49] 2025-10-12 17:36:34,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:36:49] 2025-10-12 17:36:42,974 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:36:49] 2025-10-12 17:36:43,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658343024448)>', '<ExcThread(monitor, started 139657597658880)>']
[2025-10-12 13:36:49] 2025-10-12 17:36:43,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:36:49] 2025-10-12 17:36:43,849 | INFO     | [monitor] control thread has ended
[2025-10-12 13:36:49] 2025-10-12 17:36:48,715 | INFO     | all workflow threads have been joined
[2025-10-12 13:36:49] 2025-10-12 17:36:48,715 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:36:49] 2025-10-12 17:36:48,715 | INFO     | traces error code: 0
[2025-10-12 13:36:49] 2025-10-12 17:36:48,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:36:49] 2025-10-12 17:36:48,887 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:36:49] 2025-10-12 17:36:48,890 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:36:49] 2025-10-12 17:36:48,893 [wrapper] pilotpid: 2210260
[2025-10-12 13:36:49] 2025-10-12 17:36:48,895 [wrapper] Pilot exit status: 0
[2025-10-12 13:36:49] 2025-10-12 17:36:48,917 [wrapper] pandaids: 6838990874
[2025-10-12 13:36:49] 2025-10-12 17:36:49,023 [wrapper] cleanup supervisor_pilot  583159 2210261
[2025-10-12 13:36:49] 2025-10-12 17:36:49,054 [wrapper] Test setup, not cleaning
[2025-10-12 13:36:49] 2025-10-12 17:36:49,063 [wrapper] apfmon messages muted
[2025-10-12 13:36:49] 2025-10-12 17:36:49,080 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:36:49] 2025-10-12 17:36:49,086 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:36:49]  *** Error codes and diagnostics ***
[2025-10-12 13:36:49]     "exeErrorCode": 0,
[2025-10-12 13:36:49]     "exeErrorDiag": "",
[2025-10-12 13:36:49]     "pilotErrorCode": 0,
[2025-10-12 13:36:49]     "pilotErrorDiag": "",
[2025-10-12 13:36:49]  *** Listing of results directory ***
[2025-10-12 13:36:49] total 419400
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 13:36:49] -rwx------. 1 boincer umatlas     36292 Oct 11 18:59 runpilot2-wrapper.sh
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:59 queuedata.json
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:36:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:22 run_atlas
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:22 job.xml
[2025-10-12 13:36:49] -rw-r--r--. 2 boincer umatlas 221702546 Oct 12 00:22 EVNT.46676267._002674.pool.root.1
[2025-10-12 13:36:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:22 start_atlas.sh
[2025-10-12 13:36:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:22 shared
[2025-10-12 13:36:49] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 00:22 input.tar.gz
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:22 boinc_lockfile
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:22 pandaJob.out
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas    975512 Oct 12 00:23 agis_schedconf.cvmfs.json
[2025-10-12 13:36:49] drwx------. 5 boincer umatlas      4096 Oct 12 00:23 pilot3
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas      6656 Oct 12 13:28 init_data.xml
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas 190439123 Oct 12 13:35 HITS.46676269._066363.pool.root.1
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas       530 Oct 12 13:35 boinc_task_state.xml
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas      1046 Oct 12 13:35 memory_monitor_summary.json
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas    896551 Oct 12 13:35 log.46676269._066363.job.log.tgz.1
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas      7828 Oct 12 13:36 heartbeat.json
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas        95 Oct 12 13:36 pilot_heartbeat.json
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:36 boinc_mmap_file
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas        27 Oct 12 13:36 wrapper_checkpoint.txt
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas      5082 Oct 12 13:36 pilotlog.txt
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas   5812346 Oct 12 13:36 log.46676269._066363.job.log.1
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas       357 Oct 12 13:36 output.list
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:36 runtime_log
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas   6727680 Oct 12 13:36 result.tar.gz
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 13:36 runtime_log.err
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas       654 Oct 12 13:36 LexKDmHkxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMrhNDmsYL9Jm.diag
[2025-10-12 13:36:49] -rw-r--r--. 1 boincer umatlas     21112 Oct 12 13:36 stderr.txt
[2025-10-12 13:36:49] HITS file was successfully produced:
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas 190439123 Oct 12 13:35 shared/HITS.pool.root.1
[2025-10-12 13:36:49]  *** Contents of shared directory: ***
[2025-10-12 13:36:49] total 409640
[2025-10-12 13:36:49] -rw-r--r--. 2 boincer umatlas 221702546 Oct 12 00:22 ATLAS.root_0
[2025-10-12 13:36:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:22 start_atlas.sh
[2025-10-12 13:36:49] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 00:22 input.tar.gz
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas 190439123 Oct 12 13:35 HITS.pool.root.1
[2025-10-12 13:36:49] -rw-------. 1 boincer umatlas   6727680 Oct 12 13:36 result.tar.gz
13:36:50 (2204411): run_atlas exited; CPU time 52160.758887
13:36:50 (2204411): called boinc_finish(0)

</stderr_txt>
]]>

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