Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:22 (788709): wrapper (7.7.26015): starting
04:52:22 (788709): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:52:22] Arguments: --nthreads 8
[2025-10-12 04:52:22] Threads: 8
[2025-10-12 04:52:22] Checking for CVMFS
[2025-10-12 04:52:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:52:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:52:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:52:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:52:24] 2.13.2.0 1263230 129028 316988 151613 3 263 24788376 32935937 25519 16776704 0 191177312 99.583 204098610 29068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 04:52:24] CVMFS is ok
[2025-10-12 04:52:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:52:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:52:24] Further information can be found at the LHC@home message board.
[2025-10-12 04:52:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:52:24] Checking for apptainer binary...
[2025-10-12 04:52:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:52:24] Running /usr/bin/apptainer --version
[2025-10-12 04:52:24] apptainer version 1.4.3-1.el9
[2025-10-12 04:52:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:52:25] c6-5-7-2.aglt2.org
[2025-10-12 04:52:25] apptainer works
[2025-10-12 04:52:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:52:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:52:25] Starting ATLAS job with PandaID=6839083750
[2025-10-12 04:52:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:18:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:18:30] 2025-10-12 13:17:27,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:18:30] 2025-10-12 13:17:27,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:18:30] 2025-10-12 13:17:27,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:18:30] 2025-10-12 13:17:27,381 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:18:30] 2025-10-12 13:17:27,382 | INFO     | sum of square deviations: 5202469258.234375
[2025-10-12 09:18:30] 2025-10-12 13:17:27,392 | INFO     | sum of deviations: 30526022980.929688
[2025-10-12 09:18:30] 2025-10-12 13:17:27,393 | INFO     | mean x: 1760267201.8046875
[2025-10-12 09:18:30] 2025-10-12 13:17:27,393 | INFO     | mean y: 2100118.55859375
[2025-10-12 09:18:30] 2025-10-12 13:17:27,393 | INFO     | -- intersect: -10326448573.933445
[2025-10-12 09:18:30] 2025-10-12 13:17:27,393 | INFO     | intersect: -10326448573.933445
[2025-10-12 09:18:30] 2025-10-12 13:17:27,393 | INFO     | chi2: 4.266471682829591
[2025-10-12 09:18:30] 2025-10-12 13:17:27,394 | INFO     | sum of square deviations: 4903585117.76098
[2025-10-12 09:18:30] 2025-10-12 13:17:27,395 | INFO     | sum of deviations: 59453059929.78486
[2025-10-12 09:18:30] 2025-10-12 13:17:27,395 | INFO     | mean x: 1760267049.310757
[2025-10-12 09:18:30] 2025-10-12 13:17:27,395 | INFO     | mean y: 2114728.079681275
[2025-10-12 09:18:30] 2025-10-12 13:17:27,395 | INFO     | -- intersect: -21340078761.34089
[2025-10-12 09:18:30] 2025-10-12 13:17:27,430 | INFO     | intersect: -21340078761.34089
[2025-10-12 09:18:30] 2025-10-12 13:17:27,430 | INFO     | chi2: 2.927800964397304
[2025-10-12 09:18:30] 2025-10-12 13:17:27,431 | INFO     | current chi2=2.927800964397304 (change=31.376528849816705 %)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,431 | INFO     | sum of square deviations: 4616375614.768262
[2025-10-12 09:18:30] 2025-10-12 13:17:27,433 | INFO     | sum of deviations: 62058911996.317024
[2025-10-12 09:18:30] 2025-10-12 13:17:27,433 | INFO     | mean x: 1760266896.817073
[2025-10-12 09:18:30] 2025-10-12 13:17:27,433 | INFO     | mean y: 2116112.8292682925
[2025-10-12 09:18:30] 2025-10-12 13:17:27,433 | INFO     | -- intersect: -23661523407.77862
[2025-10-12 09:18:30] 2025-10-12 13:17:27,433 | INFO     | intersect: -23661523407.77862
[2025-10-12 09:18:30] 2025-10-12 13:17:27,433 | INFO     | chi2: 2.9099176410662313
[2025-10-12 09:18:30] 2025-10-12 13:17:27,442 | INFO     | current chi2=2.9099176410662313 (change=0.6108107603125347 %)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,443 | INFO     | right removable region: 245
[2025-10-12 09:18:30] 2025-10-12 13:17:27,443 | INFO     | sum of square deviations: 4903537537.760979
[2025-10-12 09:18:30] 2025-10-12 13:17:27,446 | INFO     | sum of deviations: -21912411789.776894
[2025-10-12 09:18:30] 2025-10-12 13:17:27,447 | INFO     | mean x: 1760267354.310757
[2025-10-12 09:18:30] 2025-10-12 13:17:27,447 | INFO     | mean y: 2126765.509960159
[2025-10-12 09:18:30] 2025-10-12 13:17:27,447 | INFO     | -- intersect: 7868224012.798653
[2025-10-12 09:18:30] 2025-10-12 13:17:27,447 | INFO     | intersect: 7868224012.798653
[2025-10-12 09:18:30] 2025-10-12 13:17:27,447 | INFO     | chi2: 1.864925155985555
[2025-10-12 09:18:30] 2025-10-12 13:17:27,447 | INFO     | current chi2=1.864925155985555 (change=56.288819084609344 %)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,448 | INFO     | sum of square deviations: 4616280454.768262
[2025-10-12 09:18:30] 2025-10-12 13:17:27,449 | INFO     | sum of deviations: -35043762493.85365
[2025-10-12 09:18:30] 2025-10-12 13:17:27,449 | INFO     | mean x: 1760267506.817073
[2025-10-12 09:18:30] 2025-10-12 13:17:27,449 | INFO     | mean y: 2133697.8699186994
[2025-10-12 09:18:30] 2025-10-12 13:17:27,449 | INFO     | -- intersect: 13364925893.657793
[2025-10-12 09:18:30] 2025-10-12 13:17:27,449 | INFO     | intersect: 13364925893.657793
[2025-10-12 09:18:30] 2025-10-12 13:17:27,449 | INFO     | chi2: 1.6750265215936802
[2025-10-12 09:18:30] 2025-10-12 13:17:27,450 | INFO     | current chi2=1.6750265215936802 (change=10.18264104499783 %)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,450 | INFO     | left removable region: 20
[2025-10-12 09:18:30] 2025-10-12 13:17:27,450 | INFO     | sum of square deviations: 3532187993.315543
[2025-10-12 09:18:30] 2025-10-12 13:17:27,451 | INFO     | sum of deviations: 15019213147.484432
[2025-10-12 09:18:30] 2025-10-12 13:17:27,451 | INFO     | mean x: 1760267476.3244445
[2025-10-12 09:18:30] 2025-10-12 13:17:27,451 | INFO     | mean y: 2141387.0755555555
[2025-10-12 09:18:30] 2025-10-12 13:17:27,451 | INFO     | -- intersect: -7482690245.196954
[2025-10-12 09:18:30] 2025-10-12 13:17:27,451 | INFO     | intersect: -7482690245.196954
[2025-10-12 09:18:30] 2025-10-12 13:17:27,451 | INFO     | chi2: 0.09696025585812663
[2025-10-12 09:18:30] 2025-10-12 13:17:27,452 | INFO     | -- intersect: -7482690245.196954
[2025-10-12 09:18:30] 2025-10-12 13:17:27,452 | INFO     | current memory leak: 4.25 B/s (using 225 data points, chi2=0.10)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,452 | INFO     | could have reported an average CPU frequency of 2768 MHz (12 samples)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,452 | INFO     | ..............................
[2025-10-12 09:18:30] 2025-10-12 13:17:27,452 | INFO     | . Timing measurements:
[2025-10-12 09:18:30] 2025-10-12 13:17:27,452 | INFO     | . get job = 0 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | . initial setup = 5 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | . payload setup = 52 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | . stage-in = 0 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | . payload execution = 15626 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | . stage-out = 5 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | . log creation = 0 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,453 | INFO     | ..............................
[2025-10-12 09:18:30] 2025-10-12 13:17:27,616 | INFO     | 
[2025-10-12 09:18:30] 2025-10-12 13:17:27,616 | INFO     | job summary report
[2025-10-12 09:18:30] 2025-10-12 13:17:27,616 | INFO     | --------------------------------------------------
[2025-10-12 09:18:30] 2025-10-12 13:17:27,616 | INFO     | PanDA job id: 6839083750
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | task id: 46676269
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | errors: (none)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | pilot state: finished 
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | transexitcode: 0
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | exeerrorcode: 0
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | exeerrordiag: 
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | exitcode: 0
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | exitmsg: OK
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | cpuconsumptiontime: 39986 s
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | nevents: 400
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | neventsw: 0
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | pid: 808255
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | pgrp: 808255
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | corecount: 8
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | event service: False
[2025-10-12 09:18:30] 2025-10-12 13:17:27,617 | INFO     | sizes: {0: 2348634, 1: 2348833, 2: 2348833, 13: 2348861, 24: 2348917, 36: 2348945, 42: 2349363, 47: 2349419, 15683: 2380483, 15690: 2389481, 15691: 2389537, 15722:
[2025-10-12 09:18:30] 2025-10-12 13:17:27,618 | INFO     | --------------------------------------------------
[2025-10-12 09:18:30] 2025-10-12 13:17:27,619 | INFO     | 
[2025-10-12 09:18:30] 2025-10-12 13:17:27,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:18:30] 2025-10-12 13:17:27,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:18:30] 2025-10-12 13:17:27,655 | INFO     | job 6839083750 has completed (purged errors)
[2025-10-12 09:18:30] 2025-10-12 13:17:27,655 | INFO     | overall cleanup function is called
[2025-10-12 09:18:30] 2025-10-12 13:17:28,663 | INFO     | --- collectZombieJob: --- 10, [808255]
[2025-10-12 09:18:30] 2025-10-12 13:17:28,663 | INFO     | zombie collector waiting for pid 808255
[2025-10-12 09:18:30] 2025-10-12 13:17:28,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:18:30] 2025-10-12 13:17:28,664 | INFO     | collected zombie processes
[2025-10-12 09:18:30] 2025-10-12 13:17:28,664 | INFO     | will attempt to kill all subprocesses of pid=808255
[2025-10-12 09:18:30] 2025-10-12 13:17:29,312 | INFO     | process IDs to be killed: [808255] (in reverse order)
[2025-10-12 09:18:30] 2025-10-12 13:17:29,507 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:18:30] 2025-10-12 13:17:29,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:18:30] 2025-10-12 13:17:29,521 | INFO     | did not find any defunct processes belonging to 808255
[2025-10-12 09:18:30] 2025-10-12 13:17:29,533 | INFO     | did not find any defunct processes belonging to 808255
[2025-10-12 09:18:30] 2025-10-12 13:17:29,533 | INFO     | ready for new job
[2025-10-12 09:18:30] 2025-10-12 13:17:29,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:18:30] 2025-10-12 13:17:29,535 | INFO     | ***************************************
[2025-10-12 09:18:30] 2025-10-12 13:17:29,536 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:18:30] 2025-10-12 13:17:29,536 | INFO     | ***************************************
[2025-10-12 09:18:30] 2025-10-12 13:17:29,536 | INFO     | 
[2025-10-12 09:18:30] 2025-10-12 13:17:29,539 | INFO     | architecture information:
[2025-10-12 09:18:30] 2025-10-12 13:17:29,540 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:18:30] 2025-10-12 13:17:29,560 | INFO     | cat /etc/os-release:
[2025-10-12 09:18:30] NAME="CentOS Linux"
[2025-10-12 09:18:30] VERSION="7 (Core)"
[2025-10-12 09:18:30] ID="centos"
[2025-10-12 09:18:30] ID_LIKE="rhel fedora"
[2025-10-12 09:18:30] VERSION_ID="7"
[2025-10-12 09:18:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:18:30] ANSI_COLOR="0;31"
[2025-10-12 09:18:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:18:30] HOME_URL="https://www.centos.org/"
[2025-10-12 09:18:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:18:30] 
[2025-10-12 09:18:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:18:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:18:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:18:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:18:30] 
[2025-10-12 09:18:30] 2025-10-12 13:17:29,561 | INFO     | ***************************************
[2025-10-12 09:18:30] 2025-10-12 13:17:30,064 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:18:30] 2025-10-12 13:17:30,132 | INFO     | sufficient remaining disk space (75071750144 B)
[2025-10-12 09:18:30] 2025-10-12 13:17:30,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:18:30] 2025-10-12 13:17:30,133 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:18:30] 2025-10-12 13:17:30,133 | INFO     | update_server=False
[2025-10-12 09:18:30] 2025-10-12 13:17:30,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:18:30] 2025-10-12 13:17:30,508 | INFO     | all data control threads have been joined
[2025-10-12 09:18:30] 2025-10-12 13:17:30,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:18:30] 2025-10-12 13:17:30,578 | INFO     | aborting loop
[2025-10-12 09:18:30] 2025-10-12 13:17:30,605 | INFO     | all job control threads have been joined
[2025-10-12 09:18:30] 2025-10-12 13:17:30,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:18:30] 2025-10-12 13:17:30,912 | INFO     | all payload control threads have been joined
[2025-10-12 09:18:30] 2025-10-12 13:17:31,149 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,170 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,186 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,515 | INFO     | [data] control thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:18:30] 2025-10-12 13:17:31,584 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,612 | INFO     | [job] control thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,923 | INFO     | [payload] control thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:31,989 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:32,066 | INFO     | [job] validate thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:32,074 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:32,111 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:32,280 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:32,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:18:30] 2025-10-12 13:17:32,670 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:33,530 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:33,637 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:17:34,691 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:18:30] 2025-10-12 13:18:00,871 | INFO     | PID=795047 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:18:30] 2025-10-12 13:18:00,871 | INFO     | .. there are 30 such processes running
[2025-10-12 09:18:30] 2025-10-12 13:18:00,957 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:18:30] 2025-10-12 13:18:00,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:18:30] 2025-10-12 13:18:00,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:18:30] 2025-10-12 13:18:24,185 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:18:30] 2025-10-12 13:18:24,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833699612480)>', '<ExcThread(monitor, started 139832978298624)>']
[2025-10-12 09:18:30] 2025-10-12 13:18:25,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:18:30] 2025-10-12 13:18:25,118 | INFO     | [monitor] control thread has ended
[2025-10-12 09:18:30] 2025-10-12 13:18:29,478 | INFO     | all workflow threads have been joined
[2025-10-12 09:18:30] 2025-10-12 13:18:29,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:18:30] 2025-10-12 13:18:29,479 | INFO     | traces error code: 0
[2025-10-12 09:18:30] 2025-10-12 13:18:29,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:18:30] 2025-10-12 13:18:29,726 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:18:30] 2025-10-12 13:18:29,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:18:30] 2025-10-12 13:18:29,749 [wrapper] pilotpid: 795047
[2025-10-12 09:18:30] 2025-10-12 13:18:29,770 [wrapper] Pilot exit status: 0
[2025-10-12 09:18:30] 2025-10-12 13:18:29,888 [wrapper] pandaids: 6839083750
[2025-10-12 09:18:30] 2025-10-12 13:18:30,051 [wrapper] cleanup supervisor_pilot 1557166 795048
[2025-10-12 09:18:30] 2025-10-12 13:18:30,058 [wrapper] Test setup, not cleaning
[2025-10-12 09:18:30] 2025-10-12 13:18:30,072 [wrapper] apfmon messages muted
[2025-10-12 09:18:30] 2025-10-12 13:18:30,087 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:18:30] 2025-10-12 13:18:30,092 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:18:30]  *** Error codes and diagnostics ***
[2025-10-12 09:18:30]     "exeErrorCode": 0,
[2025-10-12 09:18:30]     "exeErrorDiag": "",
[2025-10-12 09:18:30]     "pilotErrorCode": 0,
[2025-10-12 09:18:30]     "pilotErrorDiag": "",
[2025-10-12 09:18:30]  *** Listing of results directory ***
[2025-10-12 09:18:30] total 408288
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 09:18:30] -rwx------. 1 boincer umatlas     36292 Oct 11 18:59 runpilot2-wrapper.sh
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:59 queuedata.json
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:18:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 04:52 run_atlas
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 04:52 job.xml
[2025-10-12 09:18:30] -rw-r--r--. 2 boincer umatlas 219354442 Oct 12 04:52 EVNT.46676267._000588.pool.root.1
[2025-10-12 09:18:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 04:52 shared
[2025-10-12 09:18:30] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 04:52 input.tar.gz
[2025-10-12 09:18:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:52 start_atlas.sh
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 04:52 boinc_lockfile
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 04:52 pandaJob.out
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas    975520 Oct 12 04:53 agis_schedconf.cvmfs.json
[2025-10-12 09:18:30] drwx------. 5 boincer umatlas      4096 Oct 12 04:53 pilot3
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 09:10 init_data.xml
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas 189967713 Oct 12 09:14 HITS.46676269._066514.pool.root.1
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:14 boinc_task_state.xml
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas      1043 Oct 12 09:16 memory_monitor_summary.json
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas    478251 Oct 12 09:16 log.46676269._066514.job.log.tgz.1
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas      7826 Oct 12 09:17 heartbeat.json
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas        95 Oct 12 09:18 pilot_heartbeat.json
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:18 wrapper_checkpoint.txt
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:18 boinc_mmap_file
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas      4823 Oct 12 09:18 pilotlog.txt
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas   1953958 Oct 12 09:18 log.46676269._066514.job.log.1
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas       357 Oct 12 09:18 output.list
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:18 runtime_log
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas   2447360 Oct 12 09:18 result.tar.gz
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 09:18 runtime_log.err
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas       655 Oct 12 09:18 o2XLDmHkxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrrhNDmC28ZMm.diag
[2025-10-12 09:18:30] -rw-r--r--. 1 boincer umatlas     21013 Oct 12 09:18 stderr.txt
[2025-10-12 09:18:30] HITS file was successfully produced:
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas 189967713 Oct 12 09:14 shared/HITS.pool.root.1
[2025-10-12 09:18:30]  *** Contents of shared directory: ***
[2025-10-12 09:18:30] total 402704
[2025-10-12 09:18:30] -rw-r--r--. 2 boincer umatlas 219354442 Oct 12 04:52 ATLAS.root_0
[2025-10-12 09:18:30] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 04:52 input.tar.gz
[2025-10-12 09:18:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:52 start_atlas.sh
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas 189967713 Oct 12 09:14 HITS.pool.root.1
[2025-10-12 09:18:30] -rw-------. 1 boincer umatlas   2447360 Oct 12 09:18 result.tar.gz
09:18:32 (788709): run_atlas exited; CPU time 40467.535315
09:18:32 (788709): called boinc_finish(0)

</stderr_txt>
]]>

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